Ll_transcript_68870

• Id Trinity: FTRINITY_DN55040_c2_g1_i15
• Name Transcript: Ll_transcript_68870
• Sequence: GTTTAATTAAATTGGGTTAGAAAATAGAGAGGGACAGAAAGAAAAAAGGTAAATTCAACAGCAGATATTTATTGACGAAAACATCAGAACCGAACCCTCT CTCGATTTCGAAAACGTTCGCCAAATCCATCCTCCATTCTAGGGTTTCTCTCTTCACAACCTCTCTTATCAGTTATCACTTACTCGTTTGGCAAGTAAGA TGAGTGGAAATGCCAGAAACCGCTCTTCAAAATGGGATATGAGTGATGATCCTGCATTTGCACCTGATAATAAGCAACCACGGTCTTATTTTGATGGAAA TGATAAGTTAAAATCTGGCACGGGGTTTTCATCTAAGGAACCTTTTTATCGAGGAAGAATTTCAAATAAGGATGATATTATGAATAAAGACTATAGAGAT TTGGATGAAACAATGGAATGGGATGCTGATGAAACTTACAACAAGAATTTTTCTCCAGGGTTTGAGGAACGAAAATACAAGAGACAGAGTCAATCCCCAA AAAATCGTCGGAGCATGTCTGGCAGGAGTAGTCGGAGCAGGAGCCCTCCCCATGGTTTTAGGCGGGATTCAGGATTCAATGATAAAAATAGAACGAGAGC TGGAGGATTGACACAACCATGTAGAGAATTTGCTGCCGGTAAATGTAGAAGAGGTAGCCTTTGCCATTTTCTTCACCATGATAATCAAAATTACGAGGAC AGTTGGGAAAGTAAGCACAGGGAAGATGGTGCTCCCAGATATTCTGCTTCCCATGATAGTAGAGACCATTCTCATAGGAGTGGTAGATCTAATGATGGAT ACAGTAAAGGTTCTGTGGATGAATCAACTAGAGAAAGGGAAAATGATAGAAGACGGAGAGATTATTCTTTTGATCAGGGTGGCGGGCATGGGCCAAACCG TAGCGGTCTTATTTGCAAATTTTTTGCGAATGGAAACTGCCGCAATGGTAAATCTTGTAGATTTTCTCATGATAAGCAAACATATGAGAGCCCTAATAGA AGATCAAGGGATGATACATGGGGGAGCAATCCGGGTGGAGATCATCAGACATTGGATAGACCAAAATTGTCTGATTCAGTTAGTCCTACTAGAAGACGAA GAGATGATAGATGGGGTTCAGATGGCAATATGGTAGAGAATGACAACCCAAAGCAGAATGCTGCAGTAACTGTGTCTGATACAGCAAAGCTGGTTGAGGA CAAATGTGGAAATATAGGAGCCATCGATCCTGGATTCTCTGCTTGGCCTACGAAGGATGGATGGGGTCATGGTTTAGATAATAACAGAGTGCATGGTGAA CCAACATTTTCAAGTAATAAGAAGGAAAATGATCACCAGGTGGCAGAAAATGCTGGTTCCAACATGCATGTTTCCCAGCCAACAGGTACAAGCAATTGGT CTGGTAATGAAATTTCTCTTGATTGGAATTACAGGGTGGGATCTTCTAGTCATATTCAAGAAGAGCATGAACAGAATAAGCATGGCATAGCCCAGGATGG TACATATATAGCCACTGAACATGAAGGAACACAAGTTCCAGGGAAAGGCTTTAATCAGAATGCACATAATGTAAATCCTTTGCATTCTTCAAGCGGTCAT GGAGTCAGACAAAGTCAAGTGACTGTTCCCATTCTTCCTTCAAGAGGAGTTGTTACTGATATTCTTCCAGTGCAAGACTTTAATCAGAATGTGCAGAATA TAAATCCTTTTCAACCTTCAAGTGGCCATGCAGTTGGACAAAGTCAAGTGGCTGTTTCTGGTCTTCCTTCAAGAGGAGTTGTGGAAAGTATGCATACCCA ACAAGTTTCTACTGATGTTCTTCCAGGGCAAGGATTTAATCAGAATGAACAGAACATAAATCCTTTGCATTCTTCAAGTGGCCATGAAGTTGGACAAAGT CGAGCTGATCTTCCCATTCTTCCTTCAAGAGGAATTGTTGAAAGTATGCATGGCCAAGAAGTCTCTGCTGAGAAGAAGTACACAGTTGAACCAAATTTCA CAGATGCAGGCAATTCACAAGTTAGTTCAGGAAACCCTCAAACTCAGAACAAGGTAAGCAATGAACAGCTTGCTCAGCTGAGCAATCTCTCAGCCTCTCT AGCTCATATCCTTGGATCAGGTCAGCAATTACCACAGCTTTATGCTGCTTTAAATTCTCATGATGCAAAGGACAGTCCCTCACTAGCCAAAACTGAAGTG CCAGCTATGCCTGTTCCCAACACATTCATTAAGCCAGACCCTGTCATTGGATTCACGAAGCAGTATGATCCAGTGTGTGACAGTATTGAAACAAAAAATG CTGTTGCAAGTGGGTCTACCCTGGCTTTGTCTCTAAGTAAAAAAAATGCAGAAGCTAAGGAGAAGAATGAAGTGGTAGTTGTGGAAAGGCAAAGTTCTCC AAGTGGTCATAAAAATACAAAAGAGAATGGTCCTTCAGAAAACATGGACCAAAATGGTGGACCTGAAGACGCCAAGAAAACAAAGGATGCAAAGGGGATC CGTGCATTTAAATTTGCATTGGTTGAGTTTGTTAAGGAACTTCTGAAACCAGCATGGAAAGAAGGCCAAATTAACAAAGAAGACTACAAAGCAATTGTGA AGAAAGTCGTTGATAAAGTAACCAGTACCATGCAGGGCGCCAATATTCCCCAGACGCAAGAGAAAATTGACCACTATTTGTCATTCTCAAAATCAAAACT TAGCAAACTTGTACAGGCATATGTGGAGAAGGTTCAGAAAGCTTAGTGCAAGTATAGAAATTTGGCGACCAAATATTTATTTCCATGTTACTGTCGTTAG CTTGTACTTTGTTTCCTTTTCCAGAGTCTCTTTTTTGGTCCCTTTGTTCTTGTACTTTAGTTGCTAGTAGCGTCTAATAGGCATTGCAGCTCGAGTACAT ACATTCTGGGAGCTCTCATTTCCTTCTTTTTATGGCCTGTAGTTCTTTTTTCTTGTTTCTTTTTGGAAGAAATATTGGCTGCTCATGCTATTAGATATTA ATTTGCAAATTGAATATTAGGGAGTTGTTATGTGGGAGTCATTTTATTTTACTAGTTTATTTTGTTTAGAGGAAGTGTTATCTGTTTCTTAAAGCAGAAT TCCAAACATGGTGTACTTCATCTTCCTGAAGAGTAGTACTGGACTTGTTAAAGAAGTTAGTGTGGGGTACTTTGCTGCTTTTGAGTGTTGGGAAAAATAG AGATGAAATAACTTTAATGGGTTTCTTAGGGATTATATTGGAGTCTGGTTTTGGTGAGCATTGTGAATTTGTACTCAGTGTTGTGCAAACTTTCAGACCT GTTAGTTCCAGCTTTCTGACTTTGTAGAAAAGTTTTAATGGTGTTATATTTGTACTTTACTTATCTACTTCCTTTACTTACTGTTATTAGTAAACAATGA AGTGACATAGTGCTTGTATTATGAGTTGCTGAGGTGACAATTGGCAGAAAATGGATCTTTGATTAGATTTGTTTCATTTCATCTAATGACCATTTTGCTT ACCATGGTATTCAATAGAGCAATGGTTAAAGAACAAAAAAGGAAA
• Tissue: flowers
• Gene name: LI_gene_48016;
• Additional information: details;

Expression of Ll_transcript_68870

FPKM

• FPAB: 4.6
• FPNAB: 6.1
• LF1: 6.5
• LF2: 8.3
• LF3: 5.7
• LF4: 4.8
• UF1: 3.8
• UF2: 5
• UF3: 5.5
• UF4: 5.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_68870

• Blastp: Zinc finger CCCH domain-containing protein 38 from Arabidopsis with 37.68% of identity
• Blastx: Zinc finger CCCH domain-containing protein 38 from Arabidopsis with 76.4% of identity
• Eggnog: zinc finger CCCH domain-containing protein(ENOG410ZKTI)
• Kegg: Link to kegg annotations (AT3G18640)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434524.1)
• Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;