| Id Trinity | FTRINITY_DN55062_c2_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_67078 |
| Sequence | GACTGAATTAGCTTCACTTTCTTCAACCAAACCTACAATGTCTTCTTCTTATCGGGAACAACCTAAATACGACGTGTTTCTGAGTTTCAGAGGGGAAGAT ACTCGTTATAGTTTCACTTCTCATCTGTGTTTAGCTTTAACTAGGCGCAATATCAAAACTTTCATGGATACGAAGGGGCTGGAGAAGGGAAATGAACTGA AACCAGAGTTATTAGGAGCTATAGAAGGATCAACCATATCCATTGTTGTTTTCTCCGAAAGGTACGCTGGTTCCAGATGGTGTCTTCTTGAACTTGCAAA AATCATGGAGTGCCACCGAACTTATGCTCAGGTGGTTGTGCCTATATTTTATCATGTTGATCCATCCCATGTACGTCATCAACATGGTGTTTTTGGAGAT GCTTACCTACGACTTGTACAACAAAGCATTGGGGTCAGAGATGCGAATGGCTTGCCAGGTTGGACCAGAGCACTCACTGATGCTGCTAATTTTTCTGGTT GGCATATTACCAAAGACACGTCAGTAAATCTATACTCCCATGCTTCTTTTATCATTCCTCTTAAGTGGGAATATTTATAGATTTACGGCTGGAACCTGGA AACAAGCTGAATCGAGGCGATCTTGACCTTGGCTTGGTTGAGATCTATAAGAATAAACTCAGCTCGATAGTCGAATTAAGTTTATGATGAGCTATTTTTT CAGCATGAACACGACTCAATTTGAGTTCATGAATTGTTCGATTTGACTGATAATTGATTTAGCCTGTTAAGATTCTTGAACTATTTAGCTCAACTCATTA ACTTGATTGCTTAAGTTTGTTAGTTGATTATTTGTTTAATATATATACATATAATCAAGTCAAATCATAAAGCTAATGAGTCGAGTTATGCTTGATTCAA GTTCGACTTATTTATTTAAAAACATCAAGTTGTGTATTAAAGGAGCTCAGTTTTTAGTTTAAGTTTACCTTGTTGGTTCATGAGTCAAAATTATCGAGCT AAATAACGAGTCGATTTTTGAAGAATGGCAGGTTGGTTCCATATATTGCCAACCCTATATAGACCTATTGCCTTAAGCTTTTCAGTTAAGCTAGAATGTT GTGGTTCTTCTTTGGCCATTGGATGCTGATCTGCATGGTTTTTGGTCTCCTTGGTACTACTAACACAGTACAAGTTGGGCTCTGTAAGGCATTTTATGTT ACTCTATCGTTTAGTTTAGAAAGAAGTGATAGAGTTAATTAGAATGCATGTGCAAATGATGTACCCTAATGTTTTGAAGTTTGCAATATTTCATATTTTG GGCTCATCAAAACTATAATTGTTATAACAGTTATGAATCTGAAGTCATCAAGAGGATTGTTGGTGATCTCCTCCTGAAACTAGATAATGCATCCTTGACA ATTACCGACTTTCCAGTTGGACTAGAATCTCGTGCCCATGATGTGATTCAACTTTTGAAAGAGAAATCAAACACAGTTTGTGTACTTGGGATCTGGGGAA TGGGTGGATCTGGTAAATCAACCTTAGCCAAAGTCATCTACAATCAGATTCATCGTGACTTTGTATATAGAAGTTTCCTTGCAGATATTAGAGATGCTTG GGACACAAACAAAGGCAAAATTGATTTACAAGAACAACTACTTTCTGATATCCTTAAATTAAAAAAGATGAAGTTACATAGCTTTGAGTGGGGGAAAACT ATGATCAAGAAAACACTTTGTGGAACTAGGGCACTTGTTATACTTGATGATGTGAATAAGGATGAGCAATTACAAACCCTGTGCGGAAACCGTACATGGA TTGGTCCTAGAAGTGTAGTGATCATTACAACCAGAGATGCACGTGTGCTAAATGTACTTAAACCTGACCTCATCATTAGAACAAAGGAATTGGATGAAAG CGAGTCCCTAGAGCTTTTCAGTTGGCATGCTTTTAAGAAAGAAAGATCAAGAGAAGACTTCATTGAACTCTCGAGAAATGTAGTCTCTTACTGTGGGGGG CTTCCACTAGCTCTTGAAGTCCTTGGGTGTTATTTGTTCGAGAGAACAAAAAAAGAGTGGGCAAGTGTATTGTTGAAACTAAAAAAGGTTCCCAATGATC GAGTGCAAGAGAAACTAAGAATAAGCTTTGAAGGTTTAACGGATCATATGGAGAAGGATATATTTCTTGACATATGTTGTTTCTTTGTTGGCAAGAACAG AGCCTATGTTACAGAGATACTGGATGGCTGTGGACTTCATGCTCAAATTGGAATAGCAATCCTTCTAGAGCGGAGCCTCATAAAAGTTGAAAAGAATAAC AAACTAGGAATGCATGATTTGCTACGTGACATGGGAAGGGAAATTGTTCGTGAAAGTTCACCAGAGGAGCCTGAGAAGCGGAAGCGACTGTGGTTTCATG AGGACGTACTAAAAGTATTGACAGAACATACTGGAACAAAAACTGTCGAGGGATTGACTTTGAAGTTGCAAAGATTCAGTAGAGATTGCTTCAATACCAA AGCTTTTGAGAAAATGACGAGGCTTAGACTTTTGCAGCTTGATCAAGTACAAGTTGATGGAGATTATGGGTATATTCCCAAACACCTGAGATGGGTTTAC TGGAAAGGATTTCCTTTAAAGTGCACACCTGATAACTTTTACCTGGGAAATGTAGTTGCTTTGGACTTGCGACACAGTAATCTTAAACTGGTTTGGAAGG AACCTCGGGTATATATTATATTGTGATATCTACTTCAGAATTAAAATATCCTTTAATTTTGGTAGATTGTATAGTTATTAGGATAGCCACTTTAACCTTA TTTATGATATCACATTTATTCCTTGTAGCCTGTATAATGTAATTCTTGTAAAGGTAAAATCATAATTCAGAATAATATATACAAATTACTTCATCTCTCC TCGTAGTTATGGGTTAACGGTAACCCACCAATTGATATGACATGCTTATATGGAGGAGGCATTGAAAGGTACACGTTGGGGAGTAAATCCTACATTGTTT GCATCATCGTACCTGCTGGACTACTTCTATTATTGTCATTTCATTTTGAGATGCATAAAATTTTCTTTCTAAACCGAAAGGTTAAGAGCGATGGTAAATT TTATTTGCCATCATTTAGTTGTCTATTTTTCTCTCTAATATTTCTTTTTAAAAATTTGCTTCTGTAGGCTCTACAGATGCTAAAAATCCTCAATCTTAGT CATTCCAAGTACTTGACTAACACCCCTGATTTCTCAACACTCCAAAAACTTGAAAAGCTCATCCTCAAAGATTGTCCAAATTTGTCCGAGGTACACCCAT CTATTGGAGATCTCAATAGTCTCGTTCTCATAAATTTAAAAGATTGTACATCCCTTAGAAATTTCCCAAGGACAATCTATAAGTTGCAATTTTTGGAAAC TCTAATCATTTCTGGTTGTTCAAAGATTGACAAGTTGGAAGAAGATATAGTGCAGATGAAATCCATGACAACTCTGATTGCGAAAAATACTGCTATAAGA CATGTTCCTTACTCAATAGTAAGATTGAAAAGCATTGGATACATATCCTTATGTGGATATGAAGGATCATCATGTGATGTTTTTCCCTCTCTCATTTGGT CTTGGATGTCACCAACATTGAATCTAGAACACTCTAGTAACCCATTTGGGGGTATATCATCACTATCTCTAGTTTCCGTTAATATGTATGGCAAGAATTT GGGTGACCTATCATCAATGCTTAGCAGCCTTTCAAAACTTCGAAGTGTTTGGGTGCAATGTCGCTCTGAGTTTCAACTAAGGCAAGATTTTAGAAGAATT TTGGATAGCCTATCTGATTTAAATGAATTAGAAACATCATATGCGTTGCAGATCTCAAAGCATTCTTTGAGATCTCTTTTGATTGGAATGGGAAGTTACC ACCAAGTCTTTGATACTCTCAGCAGCAGCATATCACAGGGATTTACTGCTGGTGGGTCTAGTGATATTTTTCTCCCAGGTGACAATTATCCTTGTTGGTT TACCTATACTAGTGAAGGACATTCTGTACTTTTTGAAGTTCCTCAGTTTAGTGATGGACATCTGAAAGGAATGATTTTGTGTGTTGTTTATTCATCCTCC CCCGGAAGCATGACCGATGAATGTCTTAGTGGTGTGTTGATTGTTAATTACACAAAGTGCTTCATCCAGCTTTACAAGCAAGACACAGTAAGTTACTTGA ATGAGGATGAGTGGCAGGGCATAGTGTCAAATTTAGCACCTCATGACAAAGTGGAGATTTGTGTAGTTTTTGGGAATAGATTGAATGTCAAAAAGACTGC ACTGTATCTTATATATGATGAACCAACAGACAGGGTGATGGAACCGTCATCGGAGCCAATGGCACTAGTCACAATGCCATCAAAGCTGGATCAGATGGAG CCAGTGACACTAGACTAAATGTTGTCAAAGCCGGATCAGATGTAGCCAATGACGCCAATCAAAATGTTGCCGAAGCCGAATCAAACAGTGAACCAGAAAA ACATATGGTTTAGGTAACCTTTATATATATAACATGGGCTGTGGTTCAACCAAGTTCAATCAGAGAAGACTAACTAGTTACACATTCCTCTCCCCTCTCC TCTTCTCTGTATATAGTAACTGTCCACCTCTTATTAAACATTCTTTTCCTTTTCAAGAAAAAGAGGTGGAAAACGTTTTCTTTATCAAAGAAGTCTGCAA GAAAGCAAGTGTATGAGGAGTTTGCAGCTTGGCATGGGACCAGTAAGTCCAATCCAACTTTGCTGTATGTTCAAAAGAAATCACTGCTTGGTAGTAAGTT GAACCTGAGTGGTAGCTTCTTAAAATACCAGGATGATCAACTTGTGTAAATACCTTCTCTTCAAACTTGACATCCACTTCGTCTTTTTTATAAAAGAGAG ATCGAGAGACGCCCTTATGCAAATTCAAGATACCAGTAAGATTTAAATTCCTACAATATCTGTGCTATCACTAGTTCTTTGCTATGCCCCCAAACTGTCA TCCTGTATATTTTTTCTGTACTCGCATAAGCATATGTAACTTGATCTATTTTGTAAGGACTGAGCATCCTATTAGTATTCTCAACTGGTTGCCATTGGTA ATTGCAAATCTTATTGTTTCCATATTCCTAAAATGTCTTTTCAAGTGATGAGCACCAGTAGTTGTAATGGAGTAATGCTTATTTTTGTTAACACACATTA ACTTGTATATCTTCACACTTGAAACACAGTTTTTCCCATCTTATTGTAGTTGGTTCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48216; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_67078
| Blastp | TMV resistance protein N from Nicotiana with 35.37% of identity |
|---|---|
| Blastx | TMV resistance protein N from Nicotiana with 34.84% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | mtr-MIR5251 (MI0018352) |
| Ncbi protein | Link to NCBI protein (XP_019425579.1) |
| Pfam | NB-ARC domain (PF00931.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |