Ll_transcript_67082

• Id Trinity: FTRINITY_DN55062_c2_g1_i4
• Name Transcript: Ll_transcript_67082
• Sequence: GACTGAATTAGCTTCACTTTCTTCAACCAAACCTACAATGTCTTCTTCTTATCGGGAACAACCTAAATACGACGTGTTTCTGAGTTTCAGAGGGGAAGAT ACTCGTTATAGTTTCACTTCTCATCTGTGTTTAGCTTTAACTAGGCGCAATATCAAAACTTTCATGGATACGAAGGGGCTGGAGAAGGGAAATGAACTGA AACCAGAGTTATTAGGAGCTATAGAAGGATCAACCATATCCATTGTTGTTTTCTCCGAAAGGTACGCTGGTTCCAGATGGTGTCTTCTTGAACTTGCAAA AATCATGGAGTGCCACCGAACTTATGCTCAGGTGGTTGTGCCTATATTTTATCATGTTGATCCATCCCATGTACGTCATCAACATGGTGTTTTTGGAGAT GCTTACCTACGACTTGTACAACAAAGCATTGGGGTCAGAGATGCGAATGGCTTGCCAGGTTGGACCAGAGCACTCACTGATGCTGCTAATTTTTCTGGTT GGCATATTACCAAAGACACTTATGAATCTGAAGTCATCAAGAGGATTGTTGGTGATCTCCTCCTGAAACTAGATAATGCATCCTTGACAATTACCGACTT TCCAGTTGGACTAGAATCTCGTGCCCATGATGTGATTCAACTTTTGAAAGAGAAATCAAACACAGTTTGTGTACTTGGGATCTGGGGAATGGGTGGATCT GGTAAATCAACCTTAGCCAAAGTCATCTACAATCAGATTCATCGTGACTTTGTATATAGAAGTTTCCTTGCAGATATTAGAGATGCTTGGGACACAAACA AAGGCAAAATTGATTTACAAGAACAACTACTTTCTGATATCCTTAAATTAAAAAAGATGAAGTTACATAGCTTTGAGTGGGGGAAAACTATGATCAAGAA AACACTTTGTGGAACTAGGGCACTTGTTATACTTGATGATGTGAATAAGGATGAGCAATTACAAACCCTGTGCGGAAACCGTACATGGATTGGTCCTAGA AGTGTAGTGATCATTACAACCAGAGATGCACGTGTGCTAAATGTACTTAAACCTGACCTCATCATTAGAACAAAGGAATTGGATGAAAGCGAGTCCCTAG AGCTTTTCAGTTGGCATGCTTTTAAGAAAGAAAGATCAAGAGAAGACTTCATTGAACTCTCGAGAAATGTAGTCTCTTACTGTGGGGGGCTTCCACTAGC TCTTGAAGTCCTTGGGTGTTATTTGTTCGAGAGAACAAAAAAAGAGTGGGCAAGTGTATTGTTGAAACTAAAAAAGGTTCCCAATGATCGAGTGCAAGAG AAACTAAGAATAAGCTTTGAAGGTTTAACGGATCATATGGAGAAGGATATATTTCTTGACATATGTTGTTTCTTTGTTGGCAAGAACAGAGCCTATGTTA CAGAGATACTGGATGGCTGTGGACTTCATGCTCAAATTGGAATAGCAATCCTTCTAGAGCGGAGCCTCATAAAAGTTGAAAAGAATAACAAACTAGGAAT GCATGATTTGCTACGTGACATGGGAAGGGAAATTGTTCGTGAAAGTTCACCAGAGGAGCCTGAGAAGCGGAAGCGACTGTGGTTTCATGAGGACGTACTA AAAGTATTGACAGAACATACTGGAACAAAAACTGTCGAGGGATTGACTTTGAAGTTGCAAAGATTCAGTAGAGATTGCTTCAATACCAAAGCTTTTGAGA AAATGACGAGGCTTAGACTTTTGCAGCTTGATCAAGTACAAGTTGATGGAGATTATGGGTATATTCCCAAACACCTGAGATGGGTTTACTGGAAAGGATT TCCTTTAAAGTGCACACCTGATAACTTTTACCTGGGAAATGTAGTTGCTTTGGACTTGCGACACAGTAATCTTAAACTGGTTTGGAAGGAACCTCGGGCT CTACAGATGCTAAAAATCCTCAATCTTAGTCATTCCAAGTACTTGACTAACACCCCTGATTTCTCAACACTCCAAAAACTTGAAAAGCTCATCCTCAAAG ATTGTCCAAATTTGTCCGAGGTACACCCATCTATTGGAGATCTCAATAGTCTCGTTCTCATAAATTTAAAAGATTGTACATCCCTTAGAAATTTCCCAAG GACAATCTATAAGTTGCAATTTTTGGAAACTCTAATCATTTCTGGTTGTTCAAAGATTGACAAGTTGGAAGAAGATATAGTGCAGATGAAATCCATGACA ACTCTGATTGCGAAAAATACTGCTATAAGACATGTTCCTTACTCAATAGTAAGATTGAAAAGCATTGGATACATATCCTTATGTGGATATGAAGGATCAT CATGTGATGTTTTTCCCTCTCTCATTTGGTCTTGGATGTCACCAACATTGAATCTAGAACACTCTAGTAACCCATTTGGGGGTATATCATCACTATCTCT AGTTTCCGTTAATATGTATGGCAAGAATTTGGGTGACCTATCATCAATGCTTAGCAGCCTTTCAAAACTTCGAAGTGTTTGGGTGCAATGTCGCTCTGAG TTTCAACTAAGGCAAGATTTTAGAAGAATTTTGGATAGCCTATCTGATTTAAATGAATTAGAAACATCATATGCGTTGCAGATCTCAAAGCATTCTTTGA GATCTCTTTTGATTGGAATGGGAAGTTACCACCAAGTCTTTGATACTCTCAGCAGCAGCATATCACAGGGATTTACTGCTGGTGGGTCTAGTGATATTTT TCTCCCAGGTGACAATTATCCTTGTTGGTTTACCTATACTAGTGAAGGACATTCTGTACTTTTTGAAGTTCCTCAGTTTAGTGATGGACATCTGAAAGGA ATGATTTTGTGTGTTGTTTATTCATCCTCCCCCGGAAGCATGACCGATGAATGTCTTAGTGGTGTGTTGATTGTTAATTACACAAAGTGCTTCATCCAGC TTTACAAGCAAGACACAGTAAGTTACTTGAATGAGGATGAGTGGCAGGGCATAGTGTCAAATTTAGCACCTCATGACAAAGTGGAGATTTGTGTAGTTTT TGGGAATAGATTGAATGTCAAAAAGACTGCACTGTATCTTATATATGATGAACCAACAGACAGGGTGATGGAACCGTCATCGGAGCCAATGGCACTAGTC ACAATGCCATCAAAGCTGGATCAGATGGAGCCAGTGACACTAGACTAAATGTTGTCAAAGCCGGATCAGATGTAGCCAATGACGCCAATCAAAATGTTGC CGAAGCCGAATCAAACAGTGAACCAGAAAAACATATGGTTTAGGTAACCTTTATATATATAACATGGGCTGTGGTTCAACCAAGTTCAATCAGAGAAGAC TAACTAGTTACACATTCCTCTCCCCTCTCCTCTTCTCTGTATATAGTAACTGTCCACCTCTTATTAAACATTCTTTTCCTTTTCAAGAAAAAGAGGTGGA AAACGTTTTCTTTATCAAAGAAGTCTGCAAGAAAGCAAGTGTATGAGGAGTTTGCAGCTTGGCATGGGACCAGTAAGTCCAATCCAACTTTGCTGTATGT TCAAAAGAAATCACTGCTTGGTAGTAAGTTGAACCTGAGTGGTAGCTTCTTAAAATACCAGGATGATCAACTTGTGTAAATACCTTCTCTTCAAACTTGA CATCCACTTCGTCTTTTTTATAAAAGAGAGATCGAGAGACGCCCTTATGCAAATTCAAGATACCAGTAAGATTTAAATTCCTACAATATCTGTGCTATCA CTAGTTCTTTGCTATGCCCCCAAACTGTCATCCTGTATATTTTTTCTGTACTCGCATAAGCATATGTAACTTGATCTATTTTGTAAGGACTGAGCATCCT ATTAGTATTCTCAACTGGTTGCCATTGGTAATTGCAAATCTTATTGTTTCCATATTCCTAAAATGTCTTTTCAAGTGATGAGCACCAGTAGTTGTAATGG AGTAATGCTTATTTTTGTTAACACACATTAACTTGTATATCTTCACACTTGAAACACAGTTTTTCCCATCTTATTGTAGTTGGTTCC
• Tissue: flowers
• Gene name: LI_gene_48216;
• Additional information: details;

Expression of Ll_transcript_67082

FPKM

• FPAB: 3.7
• FPNAB: 3
• LF1: 2
• LF2: 1.8
• LF3: 2
• LF4: 1.4
• UF1: 1.6
• UF2: 2.1
• UF3: 1.1
• UF4: 0.9

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_67082

• Blastp: TMV resistance protein N from Nicotiana with 38.84% of identity
• Blastx: TMV resistance protein N from Nicotiana with 38.84% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: mtr-MIR5251 (MI0018352)
• Ncbi protein: Link to NCBI protein (XP_019425579.1)
• Pfam: TIR domain (PF01582.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;