Ll_transcript_22374

• Id Trinity: FTRINITY_DN55106_c8_g11_i1
• Name Transcript: Ll_transcript_22374
• Sequence: GAATGATTTAGATATACCACTAATTCAAACCATTAAATTTCTCTAGAATTGATTATATAAAATAAGGAATAAGTCTTTTAAACTTATTTCCAGCGGACTA AATTATACCTCCTAGGGAAAAGTGAAGGAGCTAAAATTGTATATTTTTGTTGTTGTTGATGCTGAATGATTGAACATGAATATGGATAGTGTTTGAATGC AAGAGACTCCAACAATAGCAGCAGTAGCATAAAACATCACAGAGACAAGGAAAATGGCTTCTCGTCTTTTCTCTTCACATCCTTCTCTCTTCTTCCATGA CCGCAAACCCACTTCTCTCTCTTCTTCTTCTTCTTCTTCTTCTCGTAACTTCAAATTTCCAAACTTCTCTTCCCCAACGCCAACGCCTCATTCCATAACC CATGCATCATCGCAACTCACCCAAAACGCAAATTCTCATGACCCAGATGCAAAGTCCTTATCTTTATCCAAAAACAAAATCTGGGTCAATCCCAAAAGCC CCAGGGTCAAACAGCTCCTTAAGAAATCGTCTTCTTCCAGGTACAACAACAACCCTCTTGTTAAAGTAACTGAGTCTTTAGACTCTTGTCGAACTGAGGA AGAACTTTCTATCATTCTGAAGAATGCTTTAGGGGACAAATTTTTAGAACGAGATGCTGTGTTTATTCTTAATAAGATGGTGAATTCAAATAATGCACCT ATTGTTCTTAATCTTTTTTTGAACAATATTAATCCGAGCGAAGACAAAGAAGTGATTCTTTATAATGTGACACTCAAGGTTTTTAGGAAATGTAAGGATA TTGAAGGAGCAGGGAAGCTGTTTGATGAAATGCTTCAGAGAGGGGCTAGGCCTGATAATATTACATTTTCGACTATAATTAACTGTGCAAGGATGTGTGG TGCGCCTGGTAAGGCTGTGGAGTGGTTCGAGAAGATGCCCCGCTATGGTTGTGAACCGGATGACATCACGTGTTCGGCTATGGTCTATACTTATGCACGT GTTAACAATGTTGAGATGGCTTTGAAGCTTTATGAACGCGCTAAAGCGGAGAAATGGCGTCTTGATACGGTAACATTCTCGACATTGATTAGAATGTATG GGATGTCAAGAGATTATGATGGATGCTTAAGTGTCTATGAAGACATGAAGGTTCTTGGTGTGAAGCCTAATGTGGCAATGTATAACACTCTGTTCAATGC CATGTTGAGAGCCAAGAGGCCACATGAGGCGAAGGTTATATATAAAGAAATGACAGATAATGGAATTTCACCAGATTTAATAACCTATGCAGCTCTTTTA CGAGTCTATGTCGCAGCACAATTTAAGGAGGATGCTCTCGGTGTTTATAAGGAAATGAAGGAGAAGGGAATGGAAATGAGTACTGTTCTTTATAACGTAC TTTTATCTATGTGTGGTGATGTAGGCTGCACTGATGAAGCAATTGAAATTTATGAAGACATGAAAAATGCTGGGACCTGCGAGCCTGATAGTTGGACATT CTCATCCTTGATTACCATATACTCCTGCAGTGGGAAAGTTTCAGAGGCTGAGGCTGTGTTGAATGAAATGATAGAGTCTGGATTTGAGCCTAATCTTTTT GTTCTAACATCACTTGTCCAGTGCTATGGAAAAGCCAAGCAAACTGACAATGTTGTTAAGATTTTTAAACAAGTCTTGGATTTGGGCACCACTCCTGATG ATCGCTTTTGGTGTTGTCTTCTGACTGTTATGGCTCAAACACCAAAAGAAGAGCTGTTTAAGCTGATTGAGTTCATCGAAAAGGCTAATTCAAAGCTTGG CTCTATGGTAGGAGACTTGGTGGAGGAGCGAGAGGGTGATGGAGATTTTAGAAAGGAAGCATCAGAACTTTTCAGTTCCATTGATGCTGAAGTAAAGCAG CCCTTTTGCAATTGTCTTATTGATCTTTGTGTCAACCTGAATGCACCCGAAAAAGCACAGGACCTTCTGGACTTGGGGCTGATGCTTAAGATATATACAG ATATGCAGTCCAAATCTCAGACTCAGTGGTTTTTGCATCTAAAGAAACTATCACTTGGAGCTGCTCTGACCGCATTACAAGTTTGGATAGGTGACTTGTC TAAGGCTTTGGCATCAGGGGAGGACCTTCCACCTCTACTTGGAATCAATACCGGCCAGGGGAAACACAAGTATTCAGACAAAGGTTTGGCTAGTGTGCTT GAATCATACTTAAAGGAACTCAATGCTCCATTCCATCAGGCTCCGGAGCAGGCTGGTTGGTTTTTAATGACAAATGTTGCAGCCAAGTCATGGCTGGAGT CTAGGAGTTCAACCGAATCAATTGCTGCTTCAAGCTCTACGGATTTAGGCCTTCCTGCAATGGTCCTTCATCATTGATAATTTTGTACTCGCTATGTAAT TTCCATGCATTTTCGAATTCCTTTCGGAAATTTTGTATGAGTCGATTGTTATGCTGGTTACCCGAGTTATCTAAACAGTATCATGCAACTATGTTACAGC TTAGAATAGAGGAATTGAAGTATAATGTTTACTGTGAAAATCACTCTAAATGGCCATGAGGGGAAAATCACAACTGGCATGTATGTCCGGTAAATAAAAG AATAAAGCTTTCCTTCTATTCTATATCATCC
• Tissue: flowers
• Gene name: LI_gene_48610;
• Additional information: details;

Expression of Ll_transcript_22374

FPKM

• FPAB: 1.6
• FPNAB: 3.5
• LF1: 3.6
• LF2: 3.6
• LF3: 3.9
• LF4: 3.6
• UF1: 3.7
• UF2: 3.8
• UF3: 3.7
• UF4: 3.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_22374

• Blastp: Pentatricopeptide repeat-containing protein At4g16390, chloroplastic from Arabidopsis with 57.85% of identity
• Blastx: Pentatricopeptide repeat-containing protein At4g16390, chloroplastic from Arabidopsis with 62.58% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT4G16390)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440002.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;