Id Trinity | FTRINITY_DN55123_c0_g1_i3 |
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Name Transcript | Ll_transcript_21771 |
Sequence | TACATTCTTCAGCAGATGATAACACTGATTTGCAGAAACAGATTGGATGCATGACTGGGATTTTTCAACTCTTCGATCGTCATCATATCGTTACTCCTCT TCTCATTAGCCACAAGAGGCTTTCTCCGGGTAATTCCCACTTCAATCATGACAACCTGGAAAGAGAGTCTAATGGCATACGCCATCGACAAAAAGGGCCC GATATAAGCTTAAACAAGGGTGTTAGTGAAAAACAAAGAGTTTCAACAGAATCATCAAGAGTTTCATTCTCTTCTTCCGGTTCATCATCGATGTCGTCTC TGGACTTCAAAGCTCAAGTAGATGCTCACTATGACCAGATTAATTTTCCGGAACCTGCAATGAGGGACACAATTATGAACCAAAGAAGCACCTCTCCTCA TTTAGGACGCCAGTCCCTTGACTTGAGGGATGTGGTGAAGGACTCGATGTATAGGGAGACTAGAGGACTATCATCGAGGACGACTGCCAAAGAGGAAGCC GCAATTTGTGTCATGAAGCACAGGGATTCTCCGAGACCTCTTCAGCTGTACAAATCTGATGGATATGATAGAGTTGGAATAGATGGAAAACAAAGTGCTC CTATAGATGTAAAGGACTCTCTCCGAGTCCTTGCTAAACTTAGAGAAGCACCTCGGCATTATGGTGAAGCAATAGAGCCGTCAAGATTATCATCGTATGA AGTAAAAGATGGAGGAAACTGGTATTCTATCTCAAAGGATGCGCCTCGGTTTTCTTATGATGGAAGAGAAATGAGTCGCTTATCTTTCGAAACAAGAGAA ACTATCAAATGCCAACCAAAGCTGCCAGACCTTCCTAGACTTTCACTGGACAGTAGGCAAGGTTCTTGGAGCACATACAACCCTGATTCAAAGAAACACA GTCACTTAAGAAATTCCAGTACTGGTAACTCCACCTCAGATGAGAGTCTCTCTAGTCTACAACAGTCTTCAGCAACGCAAAGCCGGCCACCTAGTGTTGT AGCAAAACTAATGGGCTTGGAAGCGTTGCCGGAGTCCTATTTGGCCAATGAAAGTCAATCAAATTTGAGTGAATCTGGCTCGACTCGAGGTAATGGTCAG TTTTCAGGATCATCAAAAGATGGATTCATTAGGCCACTTCAAATTTCTAATTCACCGAAAAGTTCATTGAAAGACCTGAATTCTCCACTGAGGAAGAATC CTGATGTGGTTGTGAAACCAATCTCAAGGTTTCCCATTGAGCCTGCACCATGGAAGCAGCAGGATGGAAACAGAAGCTCCAAGAAACCAAATTCCAAGGC CTTAAAAGCTCCAGCAAAAACACCAGATTCATTTCCTTCCGTTTATAGTGAGATCGAGAAGAGATTGAAGGATCTGGAATTTAAACAATCTGGAAGGGAC CTTAGAGCACTTAAACAGATACTGGAAGCAATGCAAGTAAAGGGGCTGTTAGAGACTAGAAAAGAAGAACAGGCTTCAAACATTGCTGGAAGTCAAAGAG AGTATGAATCAAAACCTTCGAGTCTAATTCAGAATTCACGGTCAACAAAGCAGCAAAATTCACACGTAAACAATCTTGTACTCAACACAATTAGGGGATC TGACTCAGCAAGGACTTTTGAATCTCCAATTGTGATCATGAAACCAGCAAAACTTATTGAGAAAACCAGAACTTCAGCGTCTTCGGTCATTCCAGTTGTG GGCCTTTCTGATCATAGACTCCAAAGTGGTTGCAATGTGCATGTAAATAATAAAAAAGGGACAGCTTCTGGTCCAATAGCAAAAGATCAGTCGCCAAAAA CAACTCGCAGGGATGCATCTACCAGTTCCGGTGCTAAGAAAGCTAGTAGTAGTAGCAAGACTACAAAATCAACACAATCACTGCCAAGGTCTCAACAATT TCCAGGTTCAGTGAAGAACTCAGGATCTGTAAGCCCGAGAATGCAACAGACGAAGTTAGAATTGGAGAAGCGATTACGTCCGCCTGCCCCACCATCAGAT TCAAATAAACCAAGAAGGCAATATGTTAAGCAGGCAACAGAATTAGTTTCACGAGGCCGAAAACTGAGACAAAAAGTGCCTAATAAACAGCACAGTGATG ACCAACTGAGTGAGATCAGCAACGAGTCAAGAAGTTTAAGTTGCCAAGGGGATGAAATGTCTCAGAAATCAGACAGTATAGCTGACAATTTGAACATTGA TGTGGAAGTCACCAGTAGTTTACGATCTTCTAGAATTATTAACCAAAGCCCATCTTTGAAAGCTAGTGAGCAGTTGGTTTCAGGATCAATGCACAAGGTA AGAACTATGATGTTTTCTTCCAGTTCATGCTTTCTGATTAGAACTGTATGAGAAATTTAACATTTCAAAACATATTCCAATAATAAGTTGCAATGTATAT TTTGCTTAATTTTCCAGAAATCAACTCTGAGGTTGGATGAGGATGAGTCAATTGCAGAACTTGCAACAGATGGTCAAGATCATCCAAGCCCAGTTTCAGT TCTGGATGGATCAGAATACACAGATGATGTGCCCTCCCCGGTAAAGCGTATATCCAATGCTCCGAAAGGTACACTTTTTTCTTCCATATAAGGATATATG ATTAAGAGCCTTATTACCCCTGACCAGGGATGACTGTACTTCATGTTGAGCCTAATCAAATTAAACAAATTCCTTGTTTTCGGTTGGATTCACTTCGGTA TCAAGATTGATGGTTACAGCTAGGAAAATACTCTTGCTTTATGGCTGCATCAGACATGATAATTGAAATTGTGATTAATATCACATCAAGAATCCTGAGG CTTTGTACATTCTTCCTTGCACAATCTATTTTTCTTGAAAGTTTAGTCTCAAACATCGACGAAAGAAATAAATTTTATTTGTATTTGGCATATGCTGAAG AATCTAAAGAAACCAATCATAGAAATAAATTTAGTCTCATTATAAACTTAATTGCAGTAGCTGGTAATGCTGAAGAATCTAAAGAAACCAATCATAGAGA TCAGTGGAGCCCCGCGGATAGCTTTTCATTCGACAGCACTGGAACTGGAGAGATCAACTGCAAGAAATTGCAGAGCATAGATCACCTTGTTCAGAAGCTT AGACGGCTAAACTCAAGTCATGACGAATCTAGAATCGATTACATCGCTTCCCTTTGTGAAAACTCAAATCCAGACCACAGATACATATCTGAAATACTGT TAGCTTCAGGTCTCCTACTCAGAGATCTAAGTTCTGAATTGCTCACATTTCAAAATCACTCATCAAGTCATCCCATCAACCCTGAGTTATTCCTTGTATT GGAGCAGACCAAGGCAAGTAGTTTGCTTTCTAAACAAGAAATCTGCCCCGGAAAAGTTGCATACACGAAGCTGAATTCCGAAAAGTTTCATAGGAGACTC ATCTTTGATGCTGTAAATGAGATTCTAGGTGCAAAATTATGCTCTTGTCCTGAACCATGGTTGAAGACTAATGGACTATCAAAGAAAACCCCGAGTGCGC AAAAGCTTCTTAAAGAACTATGCTTTGAGATAGAGAAAATGCAAGCCAAGAAACAAGAAATGAGTATAGAAGATGAAGGGGATGGTCTAATAAGTATGTT ATGGGAAGATGTGATGCATGGGTCAGAAAGTTGGACAAATTTGTATAGTGAAATACCTTTGGTAGTGTTGGATGTTGAGAGACTCATATTTAAGGACTTA GTTGATGAGATTGTGATTGGTGAAGCTGGTAACTTGAGGAACAAGTCAAGTAGCTGCAGAAAGCTATTTGGAAAGTAGTTCATTATATTCTTCCCATTTT CACTATTCTTGTCATAAGAGTTTGCATATTACAGCTTTGTTTATTTTTGCTAAGTTGTAAAGAAACTTAACTTACTTACCTTGGATTTATAGAGTACATA TATCAAAATTTGCAGTGTTTTGAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_48750; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_21771
Blastp | Protein LONGIFOLIA 2 from Arabidopsis with 29.61% of identity |
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Blastx | Protein LONGIFOLIA 2 from Arabidopsis with 29.32% of identity |
Eggnog | NA(ENOG411078I) |
Kegg | Link to kegg annotations (AT3G02170) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019451756.1) |
Pfam | DUF761-associated sequence motif (PF14383.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |