Ll_transcript_20827

Id TrinityFTRINITY_DN55124_c4_g1_i8
Name TranscriptLl_transcript_20827
SequenceGTTCAAATGTGGTTCATGCGGTTGCGTTGCGGCCTGTTGCAGTTGCATCATTGTGATTCGGTATCACACCGCAATTGCGGTGTGACGCGGTTGCAGCTGT CACCGCAACTGCAATATTGCGGCCGCATCACGTGATGCGGTCCGCAATTTAAAACACTGGGTAATGATATAGGTTTTAGGACTTGGCGAAATTGCATTGC CATCGCAATTGTGTTTGCAAATGCTTGCAATTGTCGGAATTGTCAATGTTTTTGAAGTTTCCGAAACAAATTCCATAATAGTTATTTAAAACATTGATGT TAACAATGGATCTTGCTGAAATCTGAAATATTAAATATAAGCTTTGTGTTTTAATGTTTGTCTTCAGTTAATGAAACACTTTTGATTTTTACTGTGATAT TGACAGGGCGGAAGATTTAAGGGCTCCATTTAGCCACTTTGGTCCTCTGAAGGATGTTTATCTGCCTCGAGATTATTATACTGGAGTTGAAGAGAAGAAA GAAGTAATAAGAATGTTGTCATGAAGAGAAGAATGAAGTAATAAGAGTTCTTCTGTTCAAGGTGATGTTAGTGTATTGAAGAATCGGAAAGTTGAGTTTG AATTCATTGTGAAGAAGTTCAAGTCATGAAGACTTTCATCTCAATTAATACCTTGACTTCTACAAGGGAGCCACGTGGTTTTGGGTTTGTTCAATATTTG GATCCAGATGATGCTGCAGATGCGAAATATCAGATGGATGGTCAAATTTTTCTTGGCCGTGAGTTAACTGTGGTGTTTGCAGAGGAAAACAGAAAGAAAC CTGCAGAAATGAGAGCAAGAGAACGTGGAAGGTCATATGATTATAGAAGATCTCCACGCCGATATTCCCGTTCACCACGGTATGGGCAATACTCACGAAG TCCAGACTATTCACCTTCTCCTCGAGGAAGGCATTATTCCAGGTTTGTTATTTCCTTAGCTCAATGAGTTAGTTATAACTTGTAGGCATTATTCCATTTC GAGGTTTGTTATTTCCTTAGCTCAATTTTTGTAAAGCTGCTTTTATTATGATTCAGGTCCATCTCACCAAGAGACAGAAGATATCGGGGGCGGTCATACT CCAGATCACCTTATGGATCAAGAAGCCGCAGTCGAAGCAGGAGTTACCGTAGGGGTTATAGCAGGAGCTTAAGTCGAAGCCCTGGGTACTCTAGGTGAAT GGCAAGTCAAGCTTGATGAACATGGAGGAAGATGCTGTAGTTTATAATTTGTCAGTGAGGTCTTGTGTGTTTCTGTTCTTCCAGATTGTTAATATTAATG GTTTTCTGGTTGAAAGGATTTATGATATGCTTTTTCTTTCAGCTTTCTGAAGAGACAATTATGTGTGGTTTATATTTTAATCTTAGTTTTTATTGAACTG CTTATTTCCGTGGATGTTTAGTCTGCCCTGTTTTTACTGCATGGATGTTTGGGTATTAACCTTAACTTATGCTTCATCTGTAGAGTCTGAGCCTGTGAGG TATTATCTATTTCAATGAAATCCTGCAAAATAAGTCACTCATATATGAT BLAST
Tissueflowers
Gene nameLI_gene_48756; 
Additional informationdetails; 

Expression of Ll_transcript_20827

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_20827

BlastpSerine/arginine-rich SC35-like splicing factor SCL30A from Arabidopsis with 75% of identity
BlastxSerine/arginine-rich SC35-like splicing factor SCL30A from Arabidopsis with 74.07% of identity
Eggnogserine arginine-rich splicing factor(ENOG4111J16)
KeggLink to kegg annotations (AT3G13570)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019428894.1)
PfamRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;