| Id Trinity | FTRINITY_DN55254_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_138860 |
| Sequence | ATTCAACGTTCCAATTCAAACAAATAGTAAAAAAGTATATAATGAATAAATATATAAATATCAAATATCTTTATATTGGGTCCAAACAAAAACAAGAGCA CGTTGCTCTTAGTGTTTCCCTACGTTCGATTTCTCAACACTTTCCACCAATTCCCTTCCCCCTCTGACATTTCTTGACGCGATTTTGCATATTCCTTCTT ACAAACTTCTTTAAAACTCCTTCCTCTCCCACAAATCCATTATCCAATCTTCACTTCTTCAAATTGCTCATTTTTCTCTTCAACTCGTTACAACTCTTTC TTCACTTTCCTTGGATTTCTTCAGGTACCCTCTTCATTTCTCTTCTACAAGTTTTGATTTTGATGATGCTTTTCCTGAGAACAGCCCTTAATTCCATCTG GGTTTGCTTCATTTCTCACATCTTGTTCAGTTTTCTGCATCTGTTATATCATCTAACGGTCAAATTTCAGTTCAGTTTTCTATCTTGATGTGGGTTTCTG CTATCTGTTTCTAGTATTCTTAATATTGCTCTATCTGTTATGATCATCAAATGGTCAATTTTCAGTTCAATTTTCTCTGACGTGTGTTTCTGATATCCCT ATAGATCATGTTCTTTCCTGCTACTTTTCTTTCTATATATATAGTCTTCTGCAAAAATAATCAGAATAGTTTTTTGTCCAAATACATCACACTCTTGGTT TTAACGCCTCTTGCTTTGCTTTCATCAACTCTGAGACGGTATCATCAGAGTTTTATGCTTTCAAAAAGTAATCTTTAATGGTCCTTCTCAATGGTTGGTG ATTCCCTTTTCTTTCTGGTTCTTTTACTATTGTATTTTGTCCATAATCTCTACCTTTGTCTTTTATTGAAGAAATTCTTATCAAGTTATGCTTTGCACTT TATCTTATGAATATTTGTTTCTTTTGGCTTAATAAATCCCTTGCTTTTGTAATAAGTGTATCAATGATTTGTTATTTAGGTTCCTTTTGTTTATTGTTGC AAATTGACTTAATATCACTTGCTTGCCTTTTCAGGGAGAAACTTATCTGTTGTTTTTTATTTGCTTAGCACTTCGGCTCAATCTCTATCAGTGACTCAGT TCTGCAATAAGAGACAAAATGTTTGGTTCAAAGAGATCTTCTCTAAAAGCTGCTAAGGCTAGCTCTGATGGTCCTATCTATCCTGTTAAATCTGGTTCCA ATCCGTTTGATTCTGATGATAAGGCCAAGGATAACAAAAACTATAATTCATTGAGGAAGACTTCGTCAGAAGGAACTCTGGTTACGGTAGAAGCCAACAC GAACCCTTTTGATGACATGAATGCCAATAAGAGTACTTCATCATCTTCATATGCCCTTCGATCAGCAGACCGTAACAGGTATAAGAATGATTTCCATGAC TCCGGTGGATTAGAGAATCAATCAGTGCAAGAATTGGAGGGTTATGCTGTTTACAAGGCCGAGGAAACTACAAAATCAGTCAACAATTGTTTGAAGATAG CAGAGAACATAAGAGAGGATGCTACCCAAACTCTAGTTACCCTTCATCAACAGGGTGAACAAATTACCAGGACTCACCACATAGCCACTGACATTGATCA GGATTTAAGTCGGGTATTAATCTTGTTATGACCGAGTTAATTAATACAACAGTTTTAATGCTCCTAAACAGGTGGCTTCTTCATGTTTCAACTTTGCGAT GAAAGCATTGTGGTGCTTCATGGCATTCTTTTGTTCTAAAGCCCTCTGAATAAAGCATTCAATTTGTATTATGCACTAAAAATTACTAATTTTTTATTGT CCTGTTGCTGCTTACAGGGAGAAAAGCTTTTAGGTAGCCTTGGTGGCCTCTTCAGCAAAACTTGGAAACCGAAGAAGGCACATGCAATTAGAGGCCCTGT TATCTTTGGAGGTTGATATTTTCTCCGCATTTGCTGGCTTTGCTGATTTAATTATGCTGGAGTGCTTAGAAATAATGTGCTTCGTGATATGCAGATGACC CAGTCAGAAGTAAGGGAAACCATTTGGAGCAGAGAGAGAAGCTGGGATTGACTTCTGCGCACAAAGGGCAGTCCAAGCTGCCACGGACACCACCTCCGGA ACCAACAAATGCACTTGAAAAAGTTGAGGTTTGTATCAACATAGATTAGATGACTGTTGTTTAAAACTAACTGAACATGTAAAGCTTTCTAATTCTTTCT GATTTTAATGTCTCATTAATCGATGTTGGTGACTTCTACTATAGTTTATTTAGCTATGATAACCAGCTTTATTTATAATCAATGATAATTTTGCAAACTC TTCTCATCTTTCCCATATTAACCACTTAGACTCGATTCATATTCATCTTTTACGGTTAATGTTGCCTGAAACAGGTTGAAAAGGGGAAGCAAGATGATGC ACTGTCAGGTTTAAGTGATATATTGGGAGAGCTGAAAGAAATGGCTATTGACATGGGATCTGAAATTGAAAGGCATAACAAAGCTCTGAGTCATGCAGAC AATGACATGGATGAGCTGATTTCCCGTGTGAAAGGCGCCAATCAACGCGGCCGTCGACTACTCGGAAAATAAGTTTGGTTGATTCTTACCAACTTCTCAT AATTCATTTCTGATACTGTAACAGATCTACCATACAAGACTATTCTATTGCTATGATGTAAACACTACGCTCACCTTAAATGTGCAGCAATTCAAAACTT CATTTCACTCATCTATCTTGGTGGTGATTCCCAAAAACATTATCTTTTGATGAATTTATGTATTAACCAAGCAATTAGGTATCTTTTCCAAATTATATTG ATACTACTAATGTTAAAAAGACAATAGCTTAGCACCTAATGTCCAAGATTTCACAACGTAACCATATAGACACTGACCATGATGGTAAATATCACCCATC CTTATCCCATAAAACTCAATAATGTAGTGAATAGTGTGATCACACTAATTCATGTGAATTTTTTATAAAGTAAATACATAATACATGTCACATAGCAAAG TTGAGGTAACCAACAAGACATTAGTCTAATGGTGTAAGACCCCACGGATTCAGGGGACCAAATTGAAATATAAAATAAACCGATGGACCAAATTAGCAAA AGTTCTTTTATTTCCTTCCAAAATAAAACTGTTTTTTGGGCCCAAGCCCAACAGTGAAAATGTTTGAAGTGAAACCCTAGTTATATATAAATTGTGAGGC CAAAAAAGTACAGTGGTTTTTTATTCTGAGTGATAAATCTAAGCAGCATTGAGTTGAATCAGTGAATTGAAGTTTACCATGTCTGACGAAGAACATCATT TTGAGTCTAAGGGAGATGCCGGAGCCTCCAAGACTTACCCTCAACAAGCCGGTACTATCCGTAAGAACGGTTACATAGTCATCAAGGGTCGTCCATGCAA GGTTGTTGAAGTTTCAACTTCCAAGACTGGTAAACATGGTCATGCTAAGTGCCATTTTGTTGGAATTGATATTTTCACTGCTAAGAAGCTTGAAGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_49860; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_138860
| Blastp | SNAP25 homologous protein SNAP33 from Arabidopsis with 54.39% of identity |
|---|---|
| Blastx | Eukaryotic translation initiation factor 5A-4 from Lycopersicon with 95.83% of identity |
| Eggnog | Synaptosomal-associated protein(ENOG410Y3Y0) |
| Kegg | Link to kegg annotations (AT5G61210) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438764.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |