| Id Trinity | FTRINITY_DN55337_c2_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_65402 |
| Sequence | TTACCTTCTACACGTGCTTCCTTTTCACTAATTATTCGTTGCACTTATTTCCTTCACTCTCTCTACGAATTAAGAACTAAAAATGGAGCCGCTGCTGAGA GGCGAAAACAGTGGCCGGAGAGACCGGCCGCGGGGGTTACACCGCCGCTCCGATGCTCTCACTTACGGCTCCAATTACGAGAAAGCCGCCGCTCTCGTGG ATCTGGCTGAAGATGGTGTTGGTCTCCCTGAGCAAATTCTTGATTCATCAAGCTTCCAAACTTATGCAAAATTTTATTTCATATTCACTAAATTCGACCT CATCTGGTCTCTTAGTTATTTTGCTTTGATAGTCCTGAATTTCCTGGAGAAACCTCTATGGTGTGAAAACAATACCACACATTCTTGCAAGGATAGAGAG TATTTCTTTTTGGGAGAGTTGCCATACCTTACTGCTGTTGAATGTATTATTTATGAGGGAATAATTCTTTTTCTGATAACCATACACACTTTCTTCCCAA TATCATATGAAGGATCCCATATATATTGGAAAAACACTACTAGTCAATTGAAGGTCTTTTGTCTATTAGTTCTTGTTGCTGATATGCTGGTTTATATGCT GTATTCATCTCCATTGGCTTTTAATTTTCTACCTTTCAGAATTGCACCTTATATCAGGGTTGTTCTTTTTGTTCTGAACGTTAGGGGGTTACGGGAAACC GTCATTATCTTGGCTGGAATGCTTGCCACATACTTAAATGTCTTGGCTTTGGGGCTTCTGTTTCTTCTTTTTGCAAGTTGGGTGGCTTATGTGATGTTTG AAGATACAATACAAGGGAAAACAGTATTCACCTCCTATGGTACTACACTGTATCAGATATTTATTTTATTTACCACGTCCAATAACCCAGATGTTTGGGT TCCTGCCTACAAGGCTTCACGGTGGTATTGCTTATATTTCATTCTCTTTGTGCTGTTGGGGGTTTACTTTGTTACAAACTTGGTTCTTGCCGTTGTTTAT GACAGTTTCAAGAGTGAGCTTGTCAAACAAGTTTCTGAGACGGATCGTATGAGAAGAACCATGTTGGAGAAATCTTTTGATTTCTTAGATACAAATAATG TTAGATATCTTAACAAAGATCAATGCATTAGGCTCTTTGAGGAGCTAAACAAGTACAGGACTTTGCCAAATATCTCCAGGGAAGAATTCGAGTTGATATT TGATGAGCTGGATGATACTCATGATGTGAAGATCAATAAGGATGAATTTGCTGATATTTGCAATGCCATTGCTTTAAAATTCCAGAAGGAGGAATGCCTA TCTTACTTCGAGTATTTAGCATTCTACCATTCTCCTACCTCAAAGAAATTGAAAGCCTTCGTGAAGAGTCCCATGTTTGGATACCTAGTGTCCTTCATTC TCTTGCTGAATCTGGGCGCTGTTATTGTTGAGACAACGCTTGATATACAAAATAGTTCTGCTCAAAAGGTGTGGCAAGTGGTCGAGTTCATTTTTGGGTG GATATACGTAATAGAAATGGCTCTAAAGGTTTATTCATTTGGATTTGAGAACTACTGGAGAGATGGTCAAAACCGCTTTGATTTTATTATCACGTTGATA ATTGTCATTGGAGAAACTATAACTTTTGCTTCGTCTGATGGACAGACTTTTTTTTCAAATGGAGAATGGATTCGTTACCTTCTTCTTGCAAGAATGTTGA GGTTGATAAGGCTTCTAATGCATGTCAAGCAATACCGAGGCTTTGTTGCAACTTTCTTAACTCTTATACCAAGTTTGATGCCATACCTTGGGATCATATT TTGTGTCATGTGTATTTATTGTTCACTCGGTGTACAGACATTTGGCGGAATGGTTAATGCTGGAAACCCCAAATTGGAAGCAACAGATCTTGCTGATAAT GACTATTTGCTTTTTAATTTCAATGATTATCCAAATGGAATGGTGACACTTTTCAATTTGCTAGTCATGGGGAACTGGCAAGCATGGATGCAGAGCTACA AGGAATTAAGTGGGACTTCTTGGAGTTATGCATACTTCATTAGCTTCTACTTGATAACTGTTTTGCTGCTTTTGAATTTGGTTGTTGCTTTTGTCTTGGA GGCATTCTTTGCTGAAATTGATATTGAGTCATCAGAAACTTGTGATGAACAAGACAAGGAAGTTGAAGGAGATAAATTGCGGAGACGGTCTGTCGGCACA AAAACACGAAGCCAGAGGGTTGATGCACTTCTTCATCATATGTTGAGTGCTGAGTTATGTCAAACTGAGTCTTCCAATCCACCAAACTGAGATAAAATCA TTTTCAAGCTTTGTGAGTGTAATCATGTTTCTGGGATCTAAAGTTGACCATGCTTTCTTCACACTTGGGAAAAATCAAATAAGTAAAACAAAGGAGGGAA AGAAAGAGTGAAAAATCATGATGTTATTTTGATGGGAAATTGCAAGCCCCTTGGTTACTGATGAAAACTTAAAACTTAGTTCTGCATATGCTTGCTCTAC TACACTCATGGAAAATGTTGTGAATTTGTGATGATATTGATAGTCAATACTCAATAAACTGTACACTCAAGTTATATGGCCACTTTTGTTTCTAATTATG AGCCTGTTTACTTAAACAACTTAATTAACCTCTCATTCGGTTTCTTTAGCACGCGAAAAACAGCTTATAGGAAAAGTCATAAACTATATTCGTAAGATGT TTTCGTAAGTTTAAATAAGTTCTTTGTAGGCTTTTGCAGAAGCCTTCTTTATGCCCAGAGTCATGTCCTCTCATTGAGTTTCCTTGTATTATTTCAGGTT GTAGACCGGTGCCAATGCAGTATCTTATACCATGGCAAATCTTATTTTCTATTGTTAACAATGCACACAAGAGTCCACCTTATCGTGTGAAATTTGTGCA CATTTTCATGTGCTTTATGATTCATGCTATTATGCTGTTTCAGCACATGATAAATGCTTTGATTTGCTTGTGCTAAATGGGATTACATGATCATAGATAT GTCTTATTTATTCTGTGTGTTGTAATTACAACCTTTTTCTTTATTCTTTTAATCATGTCCAACTTTTTCTTGGTACTATTAATGGTATTCTCTCATCAAC TTTGATTTGTACTGCCGATAGAACTAATAAAATATCATAAGGTGGGAGTTTAGAATAATAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_50541; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_65402
| Blastp | Two pore calcium channel protein 1 from Arabidopsis with 67.8% of identity |
|---|---|
| Blastx | Two pore calcium channel protein 1A from Nicotiana with 67.57% of identity |
| Eggnog | Two pore segment channel 1(ENOG410XZT8) |
| Kegg | Link to kegg annotations (AT4G03560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437005.1) |
| Pfam | Ion transport protein (PF00520.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |