Id Trinity | FTRINITY_DN55337_c2_g2_i7 |
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Name Transcript | Ll_transcript_65409 |
Sequence | TTACCTTCTACACGTGCTTCCTTTTCACTAATTATTCGTTGCACTTATTTCCTTCACTCTCTCTACGAATTAAGAACTAAAAATGGAGCCGCTGCTGAGA GGCGAAAACAGTGGCCGGAGAGACCGGCCGCGGGGGTTACACCGCCGCTCCGATGCTCTCACTTACGGCTCCAATTACGAGAAAGCCGCCGCTCTCGTGG ATCTGGCTGAAGATGGTGTTGGTCTCCCTGAGCAAATTCTTGATTCATCAAGCTTCCAAACTTATGCAAAATTTTATTTCATATTCACTAAATTCGACCT CATCTGGTCTCTTAGTTATTTTGCTTTGATAGTCCTGAATTTCCTGGAGAAACCTCTATGGTGTGAAAACAATACCACACATTCTTGCAAGGATAGAGAG TATTTCTTTTTGGGAGAGTTGCCATACCTTACTGCTGTTGAATGTATTATTTATGAGGGAATAATTCTTTTTCTGATAACCATACACACTTTCTTCCCAA TATCATATGAAGGATCCCATATATATTGGAAAAACACTACTAGTCAATTGAAGGTCTTTTGTCTATTAGTTCTTGTTGCTGATATGCTGGTTTATATGCT GTATTCATCTCCATTGGCTTTTAATTTTCTACCTTTCAGAATTGCACCTTATATCAGGGTTGTTCTTTTTGTTCTGAACGTTAGGGGGTTACGGGAAACC GTCATTATCTTGGCTGGAATGCTTGCCACATACTTAAATGTCTTGGCTTTGGGGCTTCTGTTTCTTCTTTTTGCAAGTTGGGTGGCTTATGTGATGTTTG AAGATACAATACAAGGGAAAACAGTATTCACCTCCTATGGTACTACACTGTATCAGATATTTATTTTATTTACCACGTCCAATAACCCAGATGTTTGGGT TCCTGCCTACAAGGCTTCACGGTGGTATTGCTTATATTTCATTCTCTTTGTGCTGTTGGGGGTTTACTTTGTTACAAACTTGGTTCTTGCCGTTGTTTAT GACAGTTTCAAGAGTGAGCTTGTCAAACAAGTTTCTGAGACGGATCGTATGAGAAGAACCATGTTGGAGAAATCTTTTGATTTCTTAGATACAAATAATG TTAGATATCTTAACAAAGATCAATGCATTAGGCTCTTTGAGGAGCTAAACAAGTACAGGACTTTGCCAAATATCTCCAGGGAAGAATTCGAGTTGATATT TGATGAGCTGGATGATACTCATGATGTGAAGATCAATAAGGATGAATTTGCTGATATTTGCAATGCCATTGCTTTAAAATTCCAGAAGGAGGAATGCCTA TCTTACTTCGAGTATTTAGCATTCTACCATTCTCCTACCTCAAAGAAATTGAAAGCCTTCGTGAAGAGTCCCATGTTTGGATACCTAGTGTCCTTCATTC TCTTGCTGAATCTGGGCGCTGTTATTGTTGAGACAACGCTTGATATACAAAATAGTTCTGCTCAAAAGGTGTGGCAAGTGGTCGAGTTCATTTTTGGGTG GATATACGTAATAGAAATGGCTCTAAAGGTTTATTCATTTGGATTTGAGAACTACTGGAGAGATGGTCAAAACCGCTTTGATTTTATTATCACGTTGATA ATTGTCATTGGAGAAACTATAACTTTTGCTTCGTCTGATGGACAGACTTTTTTTTCAAATGGAGAATGGATTCGTTACCTTCTTCTTGCAAGAATGTTGA GGTTGATAAGGCTTCTAATGCATGTCAAGCAATACCGAGGCTTTGTTGCAACTTTCTTAACTCTTATACCAAGTTTGATGCCATACCTTGGGATCATATT TTGTGTCATGTGTATTTATTGTTCACTCGGTGTACAGACATTTGGCGGAATGGTTAATGCTGGAAACCCCAAATTGGAAGCAACAGATCTTGCTGATAAT GACTATTTGCTTTTTAATTTCAATGATTATCCAAATGGAATGGTGACACTTTTCAATTTGCTAGTCATGGGGAACTGGCAAGCATGGATGCAGAGCTACA AGGAATTAAGTGGGACTTCTTGGAGTTATGCATACTTCATTAGCTTCTACTTGATAACTGTTTTGCTGCTTTTGAATTTGGTTGTTGCTTTTGTCTTGGA GGCATTCTTTGCTGAAATTGATATTGAGTCATCAGAAACTTGTGATGAACAAGACAAGGAAGTTGAAGGAGATAAATTGCGGAGACGGTCTGTCGGCACA AAAACACGAAGCCAGAGGGTTGATGCACTTCTTCATCATATGTTGAGTGCTGAGTTATGTCAAACTGAGTCTTCCAATCCACCAAACTGAGATAAAATCA TTTTCAAGGTTGTAGACCGGTGCCAATGCAGTATCTTATACCATGGCAAATCTTATTTTCTATTGTTAACAATGCACACAAGAGTCCACCTTATCGTGTG AAATTTGTGCACATTTTCATGTGCTTTATGATTCATGCTATTATGCTGTTTCAGCACATGATAAATGCTTTGATTTGCTTGTGCTAAATGGGATTACATG ATCATAGATATGTCTTATTTATTCTGTGTGTTGTAATTACAACCTTTTTCTTTATTCTTTTAATCATGTCCAACTTTTTCTTGGTACTATTAATGGTATT CTCTCATCAACTTTGATTTGTACTGCCGATAGAACTAATAAAATATCATAAGGTGGGAGTTTAGAATAATAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_50541; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_65409
Blastp | Two pore calcium channel protein 1 from Arabidopsis with 67.8% of identity |
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Blastx | Two pore calcium channel protein 1A from Nicotiana with 67.57% of identity |
Eggnog | Two pore segment channel 1(ENOG410XZT8) |
Kegg | Link to kegg annotations (AT4G03560) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019437005.1) |
Pfam | Ion transport protein (PF00520.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |