| Id Trinity | FTRINITY_DN55368_c0_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_63549 |
| Sequence | TTAATGTTTTTTAAAAAAACTAGGCCGATTTCGTTATTCTAACCTCATCGTGCTGTTCTTCATTTCCAGATTTAGGGTTTGAATTCGAAGCTGTTTCCGC TGCTTCTTCTTCTTCTTCTTTTCTGTTAGGATCCGCTCAGGTTGGTTCATAAGAGAGAAGGGACTGGGAAGGAAAACACAGAAAAGGAAATGGGAACCGA CAGTGCAGAGTGAAACTGTGAATTTTGATGGGGTGAAAGTGTTGGGTCGTCTGTGGATTGTGAATTTGTAAATAGACAAACAAGTTGTGCTGTCTGTGCG TTGTTGTTGGATTGGGTGTGTGGTAGAAATTTGGTTTTGATTTCTATTTACCCATGGAGTGCAATAAGGATGAAGCTACGAGGGCTAAGGAAATTGCTGA ATGTAAAATGCAAAGTGGTGACTTTGTAGGGGCACTGAAGTTTGCTTCAAAAGCTAAACGACTCTTTCCTGACATTCAGAATATTGTTCAGATCATTACT GTATGTGAGGTTCACTGTGCTGCACAGAACAAAACCTTTGGGTCTGACATGGACTGGTATGGAATTCTTCAAACTGAACGAGTGGCTGATGAAGCAACTG TAAAGAAACAGTACAGGAAGCTCGCACTACTTCTTCATCCTGACAAAAATAAATCTGCTGGTGCAGAGGCTGCTTTTAAGTTGATTGGGGAGGCTAACAG GGTCTTGAGCGACCGTGTGAGGCGTTCTTTATATGACAGGAGCTGTAGATATTCTATTGGTACTGCAGCACCAAATCCTCCATCCAATAACTCAAATGGG AGCTCATTTGTGCCGAAACATGATGGGAATGCTAGAAATTCTCAGAGTACTTTTAATTCACACTCTTCGGATGCTCATCAGTGGGATGAAAAGCTTGCAT TCTGGACATCTTGCCAGCATTGTAGTACTAGGTACCAGTACTACAAAACAATTGTAAATGCAACCGTACGCTGTCAACAATGTTCTAAATCCTTTACAGC GCGTGATATGGGGTACCAGGGTGTGCCCCCAGGATACATGTGGACATCGCTCCATAAACAGAAAGAGGCTCCAAAGCACATGCCACCAAAAGCATCAGAA AATAATGGTGGAAAAACTTGTGGTAGAGGGCAATCAGATAATTTTGTGCGGTCAAATCCTGTATCTATGACAAAATGCACTACTGGGGTTGGTGGGCATT GTAAAGTTGAAAAGCATAAAGATGGGTATGTGGCTTCAGGACGGACAAAGGCTGGTATTGGAACATCTAAGGTTGCTGAATCCAAACTGAAGGAATCACA AACCTTGCCAAATGCTAGAAGTAAGAGAGCAAGGCAGTCAGATTTCGATTCTAGGGATGATAACAAGGTTGAAAATGGCAATGGCTTGAAAAATGCCAAT GTTCGAGAAAATGATGGTCATCCTTCGGTAAATAATGCAGGAGTGAACCAAAGAAAAGCTTCCAAGCAAAAGCAGCGTGTTCCGTGCACAGAAACTGCTC AAGATGGTGATTTCGCAAATCCTTCTAAAAGGCCACGACAATATGAATCATTTAATGCCCCTAAAGTGGAGAAAGATAAGCATGATCATGTGCAAGTAAA GGAAGCATCCAAGTCAGATCGTGATGGTGGAAAGTCAAAGGCAGACAATTGCTCTGCAGTGAATTCAAATTTCTCTCCCCAACAAGAAATCATTTGTCCT GATCCAGACTTCAGTGATTTTGATAAGGATAAGGCAGAGGATTGTTTTGCTGCTAATCAATTCTGGGCCATTTATGATGATTCTGATAGCATGCCAAGAT ACTATGCTCTTGTCAGGAAAGTGTTCTCCCCTTTCAAGTTGCAGATTACTTGGTTGGAACCTGACCCAGATGATCAAGGTGAGATTAATTGGGATGATGC TGGTTTACCTGTGGGTTGTGGTAAGTTCAAACTTGGTAATTCTCAGAGAACTGCTGATCTTGCTATGTTCTCCCATCAGATGCATTGCATAAAAGGCAGT AGCAAAGGTTCTTATTTAGTATTTCCCAAGAAAAGAGAGACTTGGGCACTTTTCAGAGATTGGGATATTGGATGGAGTTCTAATCGAGAAATGGATTCAG AATTTCAATTTGAATATGTGGAAGTCCTATCCGATTTTGATGAAAATGTTGGCATTGAAGTTGCGTATCTTGGCAGAGTAAAAGGGTTTGTTAGTCTTTT TCAGCAAACTGTGCACAGTGGAATTAGCTTATTGCGTGTTCCACCTAATGAGCTATATAGGTTCTCACACCGGGTTCCTTCATATAAGATGACCGGGGAT GAAAGGGAAGATGTTCCAAGAGGATCTTTTGAACTTGACCCTGCTGGCCTGCCTAGTAGCCTTTTTGTAGTTGGTGATCCTTGTGATGTGAAAATGAAGG ATGCAATGCTAAACAATGGTGTTAGTTGGTCACACCATGAATCCTCTAAATGTAAAGTGGAACAGGCTATGTCGAATGAAAGTCTTCACAAAGAGAAGTT ACATAAGAGTAATGATGCTGAAAGAGTATCGTCAATCCCTAGAAGATCACCAAGGTCAAACAGAAAAGGTATGGGTAATGGTCAAGTAAGCTCTAGTCAA TGTGTGATTATAGATGATGATGAAGATATTGATCAGAAGGGCTGTGGTCAACCTGAGGGAACTGCTGCTGCACATACGGCTAATGAGAAGGTCAAGACAC CACGGAAACAAGAGAAAAATAATTATGAAAGAGAGACATTGAAAGTCCGAAGGTCACCTAGAGACATAAGCAAGAAAAATGCTCAAGTAGATAAAGGTGA ATGCACAACAAGCAAGGTGACTGGCAATCATTCAAATGGCAACAAAAATATGAAGGAAAACAGTTTTACTCAGTCTGGAGGAAGTGTTCATACACCTTTG GCAAAAGCAGGTGAATGTGCAACAAGCAAGGTGGCTGATAATCAGTCAAATGTCAACAAAAATGTGAAGGGCAGCAATTTTTCTAAGTCTGGAGGAAGTG TTCAATCACCTTGGAAAAAAGATTGTGATCTCGCAGAAGCATCACGGTATGACTTTAAGAAGGAAAAATCTGAAGAGAAGTTTCAGTGTGGTCAGATATG GGCAATATATGGTGATAAGGATAGGATGCCTGCTGTTTATGCTCAAATTAAGAAGATTGAATTGGCCCCTAACTTTAAGTTGCACGTGTCCCTACTTGAA CCCTTCTCTTCACCAAAAGACTTCAAAAGAACAGTGTCTTGTGGCACCTTCGAAGTTAAAAAGGTCAAACCGCAAATTCTTTCTCTCTCTGAATTCTCTC ATCAACTAAAAGTTGAGCCTGTGGCAAATAATTTGTATGAAATTTACCCAAGAAAAGGTGAGGTTTGGGCTCTGTACAAGGACCAGAACTATGATTTGAC TTGTTCTAACCCGGGGAGAGGTGATTATCATATGGTAGAAGTATTAGCATATACTGACAAGATTATACAAGTTGTTATTCTGACGCCTGTTAGCAGCTCT CAGCCATTTTTCAGGGCTCCTAGAATCCAGAGATCAAAGGCTGGTGTAATTGAAATATTTAAAGAAGAGGTTGGTAGATTTTCTCATCAAATTCCTGCAA TTCGGCACAATTTGGAAGACAATGTTCACCTCAGAGGATGTTGGGAGCTTGATCCTGCTTCAATCCCTGGTTTTATCTGACATTGAGACCGAAGTACAGC CTTTTTTTCTCTGCTAGACTCATTTTTCATTAATTGTGGACTTAGCATTCTCTCTCTTATGTGACTTAACTAACTTTGTATGAAGTAGCAATGCATGGAA ATGTGTTTCTAGGGATATTCTTATTCTGTGTTTGGATTAAAAACGTAGTTCTTATCTTTTGCTTATGTTTGACATTGAGACATTCCATAACGATGTCTAT ATCATATATGATGTCCTGATTTGCTTCAATTTGATAGTTTTACACTTTTACTATATCACTCAAAGATGGTGGGTGAGCTTTACGCAATATAAGGTTGTGT GCTTAGTAATTATGATATTACATATTCAAATTCTGGAAACAACCTTTCTCTTGTAATTTAAAGATGAAAAGGCTATGCATATCTACCTTTCCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_50779; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_63549
| Blastp | DnaJ homolog subfamily B member 12 from Bos with 32.56% of identity |
|---|---|
| Blastx | DnaJ homolog subfamily B member 12 from Homo with 32.56% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (533603) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423228.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |