| Id Trinity | FTRINITY_DN55413_c1_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_111087 |
| Sequence | GGTATTGTATGAGTGTATTGCTTCTTCTCTTTCTGTCTTTGGTCCAACACCAACACCCAACCCCAACCCACGACAACAACATAGAACGGTGCCGCCTTAC TTCACCATCTCTCCAAAATCTAACGTTAATTTCCACTCAAACAATCCAAACCCATCTCATCATTTGGCCCATAAACCCCGTTCTATATTCCATTCCCCAT CTCAGATCCAAACATTCAAACACTCTCTCGTGTTCTTCATTTTCATGAATTGGAATGCGAGTTTTCCTTAATTGTCAAAGCCAGCGTTAGATTTTGAAGA AACAACGAAAGATGGTTGGAGGAAGAGTTGTGAAAGTGAAGAGAGATACGCTACGAGCATGCATGACATGCCCTCTTTGTCATAAACTCTTCAAATATCC TACTACTATCTCTCTCTGTCTTCATACCTGTTTGTTTCTCTTTCTCACTTCTTTTTTATCTCTTTTCTCAATTGGGTTTTCATCTTTCTTCTTTTCTCTT TCACATTTTCACGTCCAATTAGTTACATCCATTTTTTAGTGATTTGGTATTTCAGTTTTCAGTTTAATTCCTCTATTCTTTCTTGTCACTGTGTTGGGTG ATTCATGATTTGCATTTTCTGTCCCTGTTCCTACCAAAAAAATAATCTTTCTATTCAACATGTTACAGGACTCTGGTCTTAATTATATTTTGATATAAGG ATTTTGTGACTTTTTTGTTACCATGATAAGAATGTTCAACTGTTTTTTTTTGTTACAGTACGTGGAGCAATACAAGTACTTTCCTTTTATGTGATTTATT GGTTGTTTTGATTTATGTGATTCTGTCTTATTTCATTTTGCTGCCATAGTTTAGACTATAGTTATGGAGCTTATTTTGGTCTTGCCCATTTAAGGTGGTA CACTGTGTTATGGAATTTCTTAAGGAAGTGCAGATGTAGTTGAATTTCATGTTTATTTTATAATACTGCTATCACATTATATTTACTTGTTGCATTCTTG AATTATACACATATACAATGTATTGAGCAATGAATCCGGAACCAGTTTGCAGGAAGTGCATATACGAGAAATTCTCGGATGACGAGGTGGATTGCTGTCC AGTGTGCAACATTGATCTGGGCTGCCTTCCAGCGGAAAAACTCAGGCCAGACCATAATTTGCAAGACATAAGGGCAAAAATATTCCCTTTTAAAAAGAAA AATATTAAGACTCCAGAAGTTTTGTCTTCAATATCCCTGCCTGCAAAGAGGAAGGAAAGGTCGCTCTCATCATTGGTGGTTAGTGCTCCGAAAGTTTCGA TGCAAAGTGGCTTTACTGGAAAGAGAACAAAAACCAGTACAAGAAAGGCTACTGCTTTACGTGGATGCAGTTTTATTCTTGAAGAAACCATAAAGAAGGA AGCAACGTGTGAAGATAATATGGATTCTTCTGTGGCTGAACCTTCTAAAAAACATAAGCCTGGTGAAGATATAGAGGACAGTGTAGAACTTACAGAAGGG AAGGCTGATTTATGGACACCATTGAACTGTCTTGTTGAAGCTGCCAATAGAACAAAGTCCTATAGGTCAAATTCACATGCAACTCCTTCTTCCAAACTAG ATTCTCCAACTACCCCTTGTGGTGATGTTGATATGTCTACAAATGCAAACAAACCGGAGCTACCGGCTTCTGTCCAGAGTGAATTAAGCATTTCTAAAAC CAAAAATAAGGATAACGGACATAAAACAAAATTTGGAGATGACAAGGATGGAAGCAGCTTGCCCTCAAGACCAGTGAAGCGAAAGAGGTTGCGTCCTGCC GGCCAGAAAAGAGTTGAAGCATCTGAGATGTCTGCGTCAGCCCAAGTCGTGCTAGATGCTTCAAATGGAAAATACAACAGAAAAAACAGTCCCATTTGGT TTTCATTAGTTGCTTCAGACGACCAGTAAGTTAGTTTTTTATATGAAAAAATCGTAGTAATCAAAAGGTGCCGATCTTCCGTTAACCTTGAAGAAATGGA TGTTATCATGCAGGAAAGGAGATTTTCCACTGCCACAGATCTCAGCATGTTACTTGAGAATAAAGTAATTCTTCTGAATCTCATTTTCATTCTGTTTATT TGGTTTATTTTTAAGTGAGTACAACTTTGGCCTATGAGTTGAACATAATGTAGTAACTTTTCTCATTTATTGTGTAAAAATAATTGTAATAAGATACGAA TAATGTTTTTACTATTCACATGTTCTCTCAGTATTTCCTAAACTGAAACCTACGAGAAGAAAAGTTACTGTATATGAAGGTACAACTCCCCATATTTTTG AACAATTTTCTGAGAGCAGTCATAAAATCAGAAAAGAGCATATTGATGTTCATTATCTAATTCATTACTTGATTTTGTTTTGCTATGATCATTGTCTAAT TCCCCAGACCCTACTAAGTGGGAACCTCGTGTATTGGGCCGACATTTTTTTATGTTATTCTAGATGGAAAATGCACACTGATGATCATTGTCCGAGCCAC AGTTTAGCAAAGGAGAACTTAACTTCCATATTGAATAATTTGAAATGAGTTGATTTTTCCTGCCTTTTTCTTTCTATTGTTGCATGCCCTTTTTGTTTCC GGTTTCCTTTTTCTTCTACTTTTATTGAGTACAATCCCTTTTTTCATGATAAGTATATGTAGGTCATACATAATTGTGTAATTCTTTGTTCTGTACCTCG TCACAGGGATGGCACTGTACCTGTCTCGTTTATTCAAAAGTACCTTGTTAAGAAACTTAATCTGGCCAATGAAGCAGAGGTGAGTTCATTATATATCACT GTCTTCTAAGAACTATGAATGATTGAAACATCCTCTCTCTCTCTTCAATGATTTCTCTCGCTAAATTTGGTTGAAGACTGTAGAGCCTGTAGTTATAGTA AGGGTGTGTGGTCCTAAACTATTTACTAATTAAGGTGTGTCTTTTATTGTTATTAGTGAAACATTGCTACAGTAGGCCAAGCAACATAGTGCAAATTTTT TGGACAGTGTCTGAGGTTATCATAAGGTCCTATGGAAGTTAGAATTTAGGGTCTGTGTGAGAGTTGTATTATAGTTTTATAATTCCTACAGAATAGTAGT ATAGTACAAATCCAGCACTACTAATGAGTACAGAAATAGAGTTCCCGACCTCTGCGACATGCACATGCAACTAGGAACTACTTAAAGAAACCTCATGTTT TGAAAAAATTATGTAAACAGTCTTATGATTTTCAGGACTGTGACTTGAAAAAATTATGAAATTTTCTTTTACATAATAAAAAATTGGCTGGTGCATTGTT TGGTGCTGTTTTGTACAGGTGGAAATAATGTGCCGTGGTCAGCCAGTTCTCCCATCTCTGCAACTGCATAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_51215; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_111087
| Blastp | E3 ubiquitin protein ligase DRIP2 from Arabidopsis with 39.94% of identity |
|---|---|
| Blastx | E3 ubiquitin protein ligase DRIP1 from Arabidopsis with 37.82% of identity |
| Eggnog | Polycomb group ring finger(ENOG410XPCN) |
| Kegg | Link to kegg annotations (AT2G30580) |
| CantataDB | Link to cantataDB annotations (CNT0002431) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453411.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |