Ll_transcript_112621

• Id Trinity: FTRINITY_DN55433_c3_g1_i4
• Name Transcript: Ll_transcript_112621
• Sequence: AAGAACTGAAGATGTTATCAACTTATGAAAAAATCTATTTTACATAAGAAGATAAAAAAAGAAAAAAATAATCTACCAGAAAAATTAAAGAAAATCAGAT AATTTGAAAAGGGTAACAGAAGAAAGAGAAAGAAAACCCAGGATGCAGAATATCTGAGTTTTTGTTGCCATAAATGTAAGAAAAGTTGAGGGAAATTTAG AGAATTGGTGAAGTTTCCATTGCAATGAACAAAACATAAAACAATCGTTTCATTAGTATCTCCGACATGGGTTCAGGTTCTAGTAGAGTTGGGTCTCCTC AATCATCTACACCCAGAGACAGGTTCAACCACACCCCTCGTTCTACAACTTCCTCTTTTCTCCGCGGTTCCTCCACCTATCAGGTGGAAGAACATCCATC TGAACCTCAGGTAGATCCAGCAATAGAGTTTGATAATGAAATGTATAAAGTCACTGAGGAATCATCTTTATTGTGTACAGAAGCTAGAACTAGCCGCAGT ACCCGTGCTGAAACTGCCACCTCATCTGATACCAGAACTGAGTTCTGTGGAAATGCTACTGTTGAAGGTTCTTCCAGAAATGTTGCAGCAGCTAGTCAGA CGAAGTGTTTATCTGAATTCGAAGAGCTAGTCCCACCTTATCAGGTAAATGCTGGTCATAATCACCATGAATCATATAGGGATATTAGCAACACAGCTAG TACTTCATCTGTAGAACAGCAATCTTCAGATCCAGTCTCTGTGAATGTTTCTTCTAACGAAGATGTAGTCAATGCTGTTGATGATCCAGTGGTTAGTGGT GGCTCTCAAATCTCTCGCGAGACAGTGCATCCAAGGAATTCCACCCCTCAAGAGCATGGAAATTCAAGTTCTGGTGAAATCTCTGTTGAGAATCACACAA GTGCTTTCATAGCTACCCGTGATTCTTCCAGTCCTGTTGCTCAAGCTTCAAACTTACCAGAAAATTCTCAACTACCAGAAGAAGAATCACGTCAGGAGAC GATCCCTTCAGGTTTAGGTATTCTTGTGTCCAATCGGGAAAGAGGCCAGGGAAGTGATGGTGTGCTTCAAGTTGATGTGGTCGCAATATCTTCCAGCATG TTGTCTGGCAGCAATGCTGATGTCGATGATCATGATGTCAGAAGGAGTGGTAGAAGATTATTCTGGGATGCCTTTTCACGACGTAGTTCTAGAGGGCTTG GTGATTCTACGACAATGATCTTCTCTGCTGGTGGTGCCGATGATCCAGAATCTCGGGATCGATGGCTTGTTGATTTTGGTGGTGATTTCTCAAATAATAG GGTTCGAGGTCCTTCTGGCTATATGGGCAGTAGAATTCACAGATTGAATGGACGAATGCGGCACTCAAGATCTGAGATATGGGAAAGGCTTCGTGGCGGC CTTGATGAGATTGGTCAATTAAATTCTTCCTGTCCACTAGGACTCCATGCAGATGGTATGTGCTCATGTGACTCTTCCCCAATAGCTGAGGAATCTAGCA CTCGAGCAAGTATTTATAGAATAGTCATGCTAGCAGAGGCTCTGTTTGAGGTTTTAGATGAAATCCATCGGCAACCTGTATCACTTTCCCTATCCATGGT CTCACTCCCTGCACCTGAATCAATTGTTGACTCTTTCCCTCTGAAGTCTCACAAGAAGGTTGATGCAGCTAATGGCAGCAATGACACTGAACAATGTTAC ATATGCCTGGCGGAGTACGAAGAAGGGGACCAAATACGAATTCTTCCTTGCAACCATGAATATCACATGATGTGTGTTGATAAGTGGCTTAAAGAAATAC ATGGTGTATGCCCTCTTTGTCGTAGCAATGTTTGTGGAGGATTAACGGAGTCTGCTGCCGACTCAGAAATGCCAACTCATTGATATTGTACACATGAATG TAAATATCCATTTCTTCAAATATATTTTATCCCTTGCCATGTTGCATATAAAACAGCTTTTTAGAGTCCAATGTACAAAGTAAGATTTCGTATCCGAATC TTGTAATGCTTCCAAACAGTTACAGATTTTTGATTCTGTCATAATCCATGTCATGACCATCTTGTGGCATTGCTGTTGTTTGGGTAGTTAGGTTGTTGAA ATTGTATGTGTTCTGTAATCCTCGGGCATGGTTGTGGCATTGCCATGTTTGGGGAATTAGGTAGTCAAAATTGCTTGTGTTCTCAAATCTATGTTGTTAC ACTAGTTCTTGTCTCAGCGCAGTTCACACTATTGTGACCAACTGCTGTTGCATATCAGAAAAAACAAATCATAATTATGTCTTTTGAAATTTGTTTAAGC GGGTGCGGG
• Tissue: flowers
• Gene name: LI_gene_51377;
• Additional information: details;

Expression of Ll_transcript_112621

FPKM

• FPAB: 5.7
• FPNAB: 4.3
• LF1: 4.3
• LF2: 4.4
• LF3: 4.5
• LF4: 4.2
• UF1: 3.8
• UF2: 5.2
• UF3: 5.1
• UF4: 5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_112621

• Blastp: E3 ubiquitin-protein ligase RLIM from Mus with 33.96% of identity
• Blastx: RING-H2 finger protein ATL32 from Arabidopsis with 44% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (19820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441071.1)
• Pfam: RING-H2 zinc finger domain (PF12678.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;