Ll_transcript_111051

Id TrinityFTRINITY_DN55489_c0_g1_i7
Name TranscriptLl_transcript_111051
SequenceAAAATGGCACATTAGAATTGGGAACAAAGTAGAAACAACCGAGTAGAATAGAAAACCTTGAAAGAAAAAAAAAATCAAACCCGAACCCAAACCCTAATCA TCAGAAATTCCCTTCTTCTCCGTTCTCATCTTCAACATTTGCGTGTGAGCGAGCAATTTCGTAGTAATGGCGGAACACTTGGCATCAATATTCGGCACCG AAAAGGACAGAGTAAACTGTCCCTTCTACTTCAAGATCGGAGCTTGCAGGCATGGCGACCGTTGCTCAAGGCTCCACACCAAACCCACTATCAGTCCAAC CCTTCTTCTCTCCAACATGTACCAGAGACCTGACATGAATGCACCCGTTGTTGACCCTAATCAGGCTCAGTCCCTTGATCCGGATAAGGTTCAAGTTCAC TTCGAGGATTTCTATGAGGATCTGTTTGAGGAGTTGAGTAAGTATGGGGAGATTCAGAGCTTGAATATTTGTGATAATTTGGCTGATCACATGGTTGGCA ATGTGTATGTTCAGTTTAAAGAGGAAGACCATGCTGCAAATGCGTTAATGAATCTGACTGGAAGGTTTTATTCAGGTGCTGCATACTCTTTCTCCTCTTT TTGCGCCCCTTGGTTTTAATAAAAATGCAAGGGGTTGCTCGTATTATCGGAATTGTTTTATTTGTATTTATGATTTATGATGAGGTTATTTTTTGGTGTC TCTGGCGAAAAATTATGGGAGGAGTTTTATATGATGAATTGTATGCATATGAAATGCTAAACTGGGTGAAAGTTGAAAGTTATTTTTGACATGGTTGTTG AGGAATCAAATAATCAATTCAATTAACACCTGTGTTGTTGTTTCAACCTTTTAGGTTATTTTACGTCTAAATTATTTTTCAATTCATCTTTAAGGAACAC TTATCTTTTTGTTCTGTTCATGACATCATGCATTGCTTTAATAACTATGGAAGTTAGTAGTTATCTAAACTAATTGCTGGGATGTGCTGTTGTATTACAA ATAATTGCAACATCATCATTCGATATGCATTTCTTTATCTCCCGCTTAAGAAAAGTTGGTATTTAAGTTGGTTTCATACCAATAGATTGGAGATACATGG TTTTCTGTGAACTCTTAATGTTTACCGTGATTTTTTGCCACTTTTACTTGGCCTTTCTTCACTCTTGTTTGAATCGTTATCTTTCTACTGTCTAATCTTG TCTTTAATTGTTATACATCAAGTTTTGTGCTTAGTTAGGATATGATTGGGCTGATGTGATCCCTGATATTCATTTCCTCTGGGAATAAGTTTATTTATTT TTTGTTTCTATTACACCTATTGACAATTGAAATAACAAAATTGATTAGAACTCTTTGGTGACACAAACATTATACATGAAATTTGTTTCGAAAATATCAT GAAGCTCATCCATCAATTTTTTTATTTTTATTATTGGGAATTGGTTTCTATTGTTCAAGTTGTTGTGTATACTCAGTACCTTATCAAATGGTGACAATTG TTACAACGACAACAACCAAGCCTTAATTCCATTAGTGGGAACGGCTACGTGGATTAAACGACGCCATAATGTTGTATCTCATAAATCATGTTTATTGTGA TAAAAACTTATAACTCAATGATTACTCTAGGTCGGCCCATCATTGTTGACTTCTCTCCTGTGACGGATTTTCGAGAAGCTACTTGTAGACAGTATGAGGA AAATGTCTGTAATCGTGGTGGCTACTGCAACTTTATGCATCTAAAGAAGATCAGCAGGGATTTGAGAAAGCGGTTATTTGGAAGAAGTAGGCGCTTTCAT GGCCGAAGTGGAAGCAGAAGTCAAAGCCCTCCAAGGAATCGTAAGCATGAGGAGCGTTCACATTCTGGTCGTAGTTCTGATAGAAGAGATTATGACAGAC ATCATGGCCACCATGGTGGTAGGGACCGGTTGCCCAGAAGCCGTAGTCCTCAACGAAGAGCAAGACGAAGTAGAAGTCCAGCAGGAAGGGATAGGTCAGC CAGAGAAAGTAGTGAAGAAAGGAGAGCCAGAATAGAGCAATGGAACAGGGAGAAGGAACTGGCAGATTCTGGTAACAAGAACAATACCAATGGCAATGAT CATGAAGAACATGATGAACAAAATGGAAGTGAATCTGGTAGACACCAGAACGACCAGATATAGTTGCTGCACTGTCACTTGTGACCCAAAAAGAAGAAGG ACCGTGTAGTTTGGCAAGTGAGTTGGTTTGTCTAGATTGCACCTACTAAGTTGGTTTTTAGTTGCTAGCATCTTATTGTCTTAATCTGAACTTCTGTTGC TTAGTTATAGAACATTGTAGTATCTAGACCAAGAGCAGTTTAATTTTGCCGCATCAAAGTGTTATACTCCTGCACCATGGAGGGAGGGATAGAGTGGAAA AATCGAGGTAATGTTTGAAAAAGATTTAATCTTTTTGAGGGGTCAGTGATGAAGTTGTAGAAAGATCGGTTTTGGTTTGGGCGTTTCACACCTTAGAATC AAGTAGACGGGATTTGATGGAAACGGGTGGAAATGGTGCATGTATCTAGATTTTAGACTGCATATATTTCAGCTGGAGAATTTTATGATACCTTTTTATT TGGAACTTCTACAAATTTGGTTTTATTGATAACAGGTTTAGTTATTCAATGAATTTTTATGCAAAATTCAGTGTTTCAATACACTGACATTGCATCAAAT ATCTGTGCTATTAGGTCAATTGCTTTTTGATCTTTATTTATTGGCTTGAGTTTTGGATGAATCATCCAACTAAATATGCATTTTGAGACCTCAAATTTGG CATGCTGTAGCTTTCAAAGTAATGTTAATAGCCTAGAATCACATGGGTAGACTTATAGTCAGTTTGTAAGTTGGTTTTGGAGAGGAAGTAAAAGAAGGG BLAST
Tissueflowers
Gene nameLI_gene_51850; 
Additional informationdetails; 

Expression of Ll_transcript_111051

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_111051
BlastpSplicing factor U2af small subunit B from Arabidopsis with 55.03% of identity
BlastxSplicing factor U2af small subunit B from Arabidopsis with 82.71% of identity
Eggnogauxiliary factor(ENOG410Z5PX)
KeggLink to kegg annotations (AT5G42820)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019414717.1)
PfamZinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;