Ll_transcript_75996

Id TrinityFTRINITY_DN55509_c0_g1_i3
Name TranscriptLl_transcript_75996
SequenceCCTATCCATTTGTTATGATGATGCTTACGTGCTTCACTTAGCCGATTCATAATTCATTCTTCTCCGCCTTCCTACTCAAGAAAATAATATTGAAGTTTTA TTAAACGAAAAAATATAAAACCCTTCTAAAACCCTCCTTAAACCACTTTCCTAGTACTTACCCCCATAAGCATGTGGACCCCAACGCCGGAGACGCTAGC TTCCACTAAAACCGCCCTTTCCGTTGCCGCTTCACTCGCCGCCACCGCGGTTCTCCTCCGATCTACCGTTAACGATCTCATACCTGATACCGTCTACAAC TACTTCAACTCCAACTTTCGCAAATTCTCTAACCGACTCTCCTCTCACCTCACCATCATCATCGAAGAACACGACGGTCTCACCGCCAACCAAATGTTTG ACACCGCCAATGTTTATGTGGGATCCAAACAACAATCTTCAGCGCAAAGAATCAAGGTGCATAAGCCACTCAAAGAAGAGCATTTACAAGTTAACATTGA CAAGAACCAAGAGTTTTATGATTCCTACAAAGGCATAAAACTCAAATGGGTCCTCGTTTCTATGCAAAACAACAACATAAATCTTCATAACAAGCGTGAT AGTCACAACAATGCTTCATTTCATCGAGTTGAAGTGCGTCACTTTGAGTTAACCTTTCACAAGAAGCATAGAGACACGGTTTTGGGTTCTTACTTGCACC ACGTTCTTCACGAGGCTGAGGCAATTAGAGAGGGCAAGAAAACTTTGAAACTTCACACCATTGATTACAATGGCACTGATTATTGGAACTCGATTGTATT AAACCACCCTGCCACATTTGATACTGTGGCCATGGAACCTGAGATGAAAGTGCAACTGTTGGAAGATCTGTGTAAGTTTCTGGATAGGAAAGAGTATTAT AAGAGAGTTGGGAAGTCTTGGAAACGAGGTTACCTTTTGTATGGCCCCCCAGGTACTGGAAAATCAAGCTTGATTGCTGCAATGGCTAACCATCTCAAGT TTGACATATATGACATGGATTTGAGGGAGGTGCAGTGTAATTCGGATCTTAGAAGGTTGCTTATTGGGACGGGAAGCCGATCAATTTTGGTGATTGAGGA CATCGATTGCTCAGTAAAATTGCACAACCGGGAAGTAAATAATAATGGTGAAGATGAAGATAAGGTTACTCTGTCAGGATTGCTAAACTTCATTGATGGA TTGTGGTCAAGCTGTGGAGATGAACGAATCATAATATTTACAACAAATTACAAGGATCGTCTTGATCCGGCATTGTTGAGACCTGGTCGCATGGATATGC ACATTCATATGTCTTATTGCTCTTTCAGTGGTTTCAAGACATTGGCGGCTAACTACCTACGAATTCAGAACCATCCCCTGTTTGAGGACATAGAGGGACT GTTGCACAAGGTTAATGCAACGCCTGCTGAAGTTGCAGGAGAGCTGATGAAAAGTGACAATACAGACAGTGCCATCAAAGGGCTCATCAGCTTCCTTCAA TGCAAGCAGCCAGGCATAACAACACCTTAAAGTAAGGTGTTTTCCTTATTTTTGAGCCAGAGGCAGCACCTTTTCAGTGTTATAGTTAGTATATTGTTTT AAGAATATTTCTTAGGAACAAGAATAGTTTATGTTGGAGATGTGATTGGATTTTAATAAGGGTTCTCTTAACTTTAACTTTAGCCTAAGAACCGAGGACA AGGTATTAAAAGTGATAAAAAGATTATTGACTTATTAAGAGAGAAATGAAAACTTTCCCCAATAGAATTCATTCATATGAACAGGGCATTAATGAGATGT TTATTAGAAATTTATAATTTCTAATTA BLAST
Tissueflowers
Gene nameLI_gene_52060; 
Additional informationdetails; 

Expression of Ll_transcript_75996

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_75996

BlastpAAA-ATPase At3g50940 from Arabidopsis with 51.56% of identity
BlastxAAA-ATPase At3g50940 from Arabidopsis with 51.93% of identity
EggnogActs as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)
KeggLink to kegg annotations (AT3G50940)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019457304.1)
PfamDomain associated at C-terminal with AAA (PF14363.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;