| Id Trinity | FTRINITY_DN55561_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_76391 |
| Sequence | AACAAAAATCTAAACTTTCTTCAATAATTCTACTTTTCAATTTCTGGGTTCTGCTTATTTTTCTAAGCTGGAAATGGCAACGGTAAGCTTTTTCTTTTCT CTCTCAGAGTTTTAATAATAGCTTGCATTTTGTTGCAAATTGTAATCTTTGTGCTACTCCTTTTTCCTTCATTGTTTATCTGTTTTTTCATCTTATGAAG TTTTGATGTAGTTGATCAAGATCAGATTCAAACATTGACATGATAAATCAACCATAAGCTACTTTTTTATGCTTAAAGGAACCATAAGCTGCTTTTTTTT ATATGAGAGTAAGCAGTAACTATAAAACCTAAAGGCATGTTTGCGAGTTGGATTTTGGAGGGGAAATGAGGGAAAAAGAATGATTCTGAGTCGTCTAACA AGTGTATTTCATGACTCTCAAACATTTCTCTTCCCTCCATTACCCTTAAAAAACATGTTTGTTTGAGGGTTGAGTTTTGGAGGGAATGGAAGGTTTTGCA GCCATCTCACCACTGTATTTCATGGCTCCCAAGTTTTACCGTCCGCTGTAGAATACAACTCGCAAACAGACCCTGAGTGGCGGAGTCATGCTCCTTATAC ATGTCTAACAAAGGGACAACACTATAGAGTCCATTGATAGAGCACCAGAGGGAACATGTAATAGTAAAATATAAGACTGCTATTGGAGAATCATGTTATG TTATTGAATGGACTTCAAGGGGTTGAACCTATATCATGGCATCATGTTGGCTTTTAATCTCTGAGTATTTTAGGAAACCAAATTAGCTTATTAGCAACAA CAATGTATGACTACAGTTATTGTTTGTTATCAAGGTTTCTATATTTGCAAATAGGAGAACATGTGTTCCTGGTTGGTGGCTCTTTCGTGCTTCCTTTAAA CTTTGATTTTAGAAAGTTTTGTATACTTTACACATATTAGTTCACATATATTTAGTATCTATTTCTTATATGTCAAATCCAAAACGAGCCAAGTGTGGTT GGTTCAGATGTTTACGAAGCCTGTAACTTTTTGCGTAAATTAATGACTCGAGTAGGCTTAATATTTGTTAAAGATGTCGAAGAAACTTATGTATACAACT TCCTTTGGATCAGCACAAGTGACATCCAAACTATGATAAATGATGGATGTGCTACTGCTGGTCATTCGAGCTAGGAGCAGATGAAAAGATGTCATAACAG ACAAAACAGAAACTTTATATCATCACCTGATTTCATTACCTTTTTTGGCTTAAAATTAGCTTTAAACATTCATGGTAGTGTTGTGCCAAAATGGTATCAA TTCAATACTTTGTTATGCAATATTTTTATAATAGATGGATCTGATCTCTGGTGGAAGTGATGAGGGCCAAAAATGAATAACCTTTTTGTAATTCCACCTG AACTGATATTTCTACTTTGTATCTATGTATGTAAAACTGTTAGGTTTGTAAACTAATTCTATAGCATGATAAAACTTTTGAACAGGATCCAACTTCGTCG ATTTTGTGTCAAGAAATCTTGATTAAATGTTACATAGTTCAAGTGGAACTTGATGAAAGTGTAAATGAAAAATATTAAACGATCAAATTGCATGGACCCC TTTTATAGGTTGATTAGACCTAGTATATGATATATATGACATTATATAACAGTGCCATTTCTCCATTCCCCTTTCGATCCCAATAGAGGTCTCCAGAGTA TCCCACAAAGAAAGAAATACCCTTTTCCGGATTCTATCCAAGGTACTAACCTGGTTTATTGTATTTATCTAGGTTATCAATGATACTTCATAACATGTAA AACATGCTCTCCTCGGAAGCCATGTAAAACATATTCTTGTATTGTTCAGTTGCTAGATGGTTTTGAAGAGATTATGTGTTGTTTTTTTTCTCTGTGCCAA GTAGTTCCAACCTTGAAGAGTTCCTTGGTGATGTAAACCATTTTGGTGTATTAGAAGGAAGCTAAACTAAGAAATTTTGTTGGGGAGTAAAATGTTTGTT GCTCTTGTAGAAATGGTAGAATTTTGTTTTGTAATTTTTAATATTTCATTTACTTATGGAAATTATAGTCTTCTATACTTCAGTTAGTGCTCCTCATTTG CTTCTTTCTTCATCCGAGTAAAATTTAATCAGAATTCAGAATTTTCGAGAGACTTAAATCGGAATTGATAGAAAAATAAATCATCTACTTTCAATAATTC TATCACTGACAATTTACTATATAGTATGAGATTGTTGGGTAGGAATCACATCAAAGCCTTTCTCTATGTAATAACCTTGTAACATGTTGAATCTCATGTT TGGGTTTATTATTTGATCTTGAAGTTCCAAAATTTGATACTCGTCGCTAAGAAAGCAAGAGGAGCAATTTCTTGTTTCCCTTTTGTTATTGCCTATTGAT AACTCTGATTCATATGGTATGGTACATTCATTAGCATTTAAAACATGTATGTTATTTAACAGCAACGTGCTCAAGTTCCGAAATTTGGCAATTGGGAGAA TGAAGGCAATGTTCCTTATACAGCTTATTTTGAGAAAGCCCGGAAAGGTCGACTTGGTACAAAGATGATTAATCCAAATGACCCCGAGGAAAATTTAGAT TCGGTTATTGACAACGTTGACCCACCCCCTTCAAAACCTGGAGTTGATTCATATTCAGAGGATCCATCTGAAAATGGATCAACTGATGGCTTACCAAAGA TAAGGGAGGATGCTGATCCTAAGCACTTCACTGATTCTCCAGCTCGTCAAAACAATGTAGGCAATAAGGGTGCCGGTGATTCCGCCCTTCGTTATGGAGG AGGTTCTGCTGATACCCGCAGAAGACCTTCAAGACAAAGTACTGGCTCTGACCACAGTGTTGAACGCTCGCCTCTTCATCGCCAGTCTAGAGCCCCAGGC AAGGATAGTCCCTCTTGGGAAAGAAAAAGTTCATATGAAAGCGGTCATGCCACACCAGGAAGGTCTCGATTAAGACCAGTTAATCGAGGCGATGAAAGTC CTGATAGAGGTACTGCTCTTCCAAAGTTCGGGGAGTGGGATGAGAGTAACCCTGCAGCAGCCGATGGCTATACTCACATTTTCAACCAAGTGCGGGAGGA GAGACAGGTTGCTGCTGGAAATGCGCCAGGCACACCCAATGGAAGACCATATACTGTCAGGAACCAACCCGCCGACGACAAAGGCCAGGGTTGCTGTTTT TGGTGGAGCAGAAAATGATTTCTTGGAAGTGTTTATTATGTTGTAATCAGAAAAAGGAGATAAGAATAGTGTTGTGAATGGTAATGAGGTTGTGTGTAGC ATTTGTAGATATTGAAGACTCTCTCCCTCCAAGAAGGAAATAGACTCAATCATGTGTTATCTTGTAAAGTGCCTAATGTGGAGGGGAAGATTCATTCCTC TACTAGAAAACATCATTGAAATGCATTATCCTAAAGTTGTGCCTTTCTTTTCATCTTTCTATATTTTCTTTCGGGCAATAAAGACCGAGGTCGAGTCTCG ACACAATAGTAAGGTTGTTGTAATTCAGTTAATATGTGTTTAGGTTGGCCTACGATATTTGTTATATATTTTTTCCAATTATTTGATAAGTGTGATTGTA GTCCTAGTTGTGTTCATATCTTGATCTACATGAGTTAAGTAGGTTCTTGAATGACTCCATATCTTATTCCAAATTGTCTCATTGACCTTTATAATCCTTT CTATCATTCTTTAGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_52549; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_76391
| Blastp | RPM1-interacting protein 4 from Arabidopsis with 33.49% of identity |
|---|---|
| Blastx | RPM1-interacting protein 4 from Arabidopsis with 38.96% of identity |
| Eggnog | RPM1-interacting protein(ENOG410YR29) |
| Kegg | Link to kegg annotations (AT3G25070) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413018.1) |
| Pfam | Cleavage site for pathogenic type III effector avirulence factor Avr (PF05627.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |