Id Trinity | FTRINITY_DN55682_c2_g1_i6 |
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Name Transcript | Ll_transcript_126487 |
Sequence | TTTTGATTTGGATCTAAGCTTCATTCACAAAGCACCATTGTGAATTTTAATGGTCAACACTATCATGTACTAAACGTAGACAAGCGTGCAAATGTAACAG GATTTCCTTAAAATTGTTTATCTCACATCATATGCCCTCATACTGTGTATGTTCCACTAGTTTTTTATCAATTATTTTGTTCATAAATTATAGACTGTCA TTTCATTTCTCTGAACATAGCACATGACAATGCTGCAATATAGAACCGTTGTTCTGTTTCAATCAGACAAATTTTTCTATGCTATAGAAATGATTCCAGA CAGATTGCTGTCAAGTGTTTAAAGCTGTAGGCCATGCCCAACAGGAAAATAGACCTTACTAAAAATTCTGTGTTTTAGTTATTCGTGCCACCAATTTTAT ATATTTTTCTCTTCATGCCAGCACTCTGTATAGAGATTAATGTGATTGGCACTCCACAGTCCACATCACAAAATGATTAGTGTAAGAACTTATTGCCATA TATAATCACATATTTTGGTGGATATTGCTTAGTAAATATAAAATCATGGGTTGGTAAGAATATTGTGCACATTTTACTTTCTTTACTTCACTAGATAGGA GACTCTTGCACTAATAAACAAATATCCTTTTCATACTTTAAAGCAATAGAAATTAGTTGCATCTCATAAAAGATCACCATATTTTGATCTATATTATCAT AAAATTGATTCTCCTCTACTATCTATCCTCATCCTCTTCATACAGTACCAATACACCAGTACGGATAAAGCTATTGAGGACATTCTACCATTCCTTACAA ATTTGTCCAATTTTACATTCATTAATTTTTATGACATTTGATCTTAACGCACGTGAAACATTCCTATTCCATGATAAAACCAATGACAAGTATACAACAA CCTTAATGTGTAGATCTTATTTTGGGTATATTATTTATGGATGAGGTCCCCAATCATATATTTCTAAATCTCTCTGTCTTTCAGTCATTTCTTTTCACTC AATTTTCTTGTAATCCTACCTCTATAATAGGAAAAACATTCAATTAAATTTTTTTATGTACAATTGGAGGCATGGATACGACACAGAGAAACACATAATA CAATAAAAGAAATATAAAATATGGCTACAAGTGTCCAAAAGTGTGACATGTAAGAGTATACGCCTACTATTATTAAGTGATTGTATGCTTAATAAAACGA GTAAAGATCCTCTATGTTACTCGAGAGTTTTGTGCTAACTAAGAGAGGTATATATGTTTTGGTCATTTAGTATATCTCAGTTCAACTTGTTACTCATCCA TCCCTAAAAGGAATTGAAGTTAAGAGGAATCAATACCAACCTTCTGTGGTTTACCAGTTCTCTCTTTATCTCTCCCCTTCTATAGGCCCTAGCTTCTTTA AACCACTAGTTCTTCTGTATAACCATTGTACAAAAGATGAAACACATTGATATCTTCTGTGCTTCACAAGCCTCAACAGCCATATGTCTTAGCATGGATC CAGAAGCATCATGTTCCTCTTCAAACACCATTCAACTTGGAGGAAAAGCCATTGACCGCTACAACCCAATTATCAGTGATTCAAGAAGAACCACATCAAA ATCACTCACTACCGCATGTTCTTCTTCTTCTAATATACCTATTGACCCCAAACCTTACCATGAATTACAAGACCAAAAGGCCAAGAAGGACTCATCTTCC AAACCAAATGGACAGAAGAAGAAAAAAGCAATGAAGGGTCATGATCAGAAGAAGAAAAGTACAGCAGAAAGGGTCAGTGAACATGTGACCAATAGTTACT GTTCTAAGCCAATTGATAGTGTTATGAGAAGGAGTTGGCTTAAGCCACATGGTCAATTATTCACTCCTGGTTCAACTAGATGTTTGCTTAGTGACATGAA CTTAGTGGATGGTTTATTAGATAATGTGTCAGATTTGGCATTAGCTATGGCTAATGACAGTAAAAAGGCTCAAGTTGTTCATCAAATTGAAACCATCCAT GCATCTAAACCCTCTACATCTTCTCTTATAAATTCTGATTCATCAGAACAGGTTAGTAGTTTTATCTCTCTCTGTCACTCACTTCATGCACATCCACGGA ACATAATTAGGACTCTCCAATCTTAACTTATATTTAATTTTTGCCTAGGTCCTCTTCACTACAAGTATACTAATCTTGACCATATGTGCATGAATAGGCA AGTCCTCCGATTCAAATTATGTATCATATCACCAGATGTGACCTGAATATTTTGGTTCCCAACATTTTGATTAAGGTGAATGTATCATACTAATTGTGGT GTGACACTGAATCTCAATAATGCGGTTACATTAGACTTCAGAACAACTACATTGGATTATATTTGAGCCACATCAGACTATATTTGGGCAGCATCATACG ACATCAAATTTAAAAATATTTTTTGAATCATGAATTAATTCACACCGCAATTGTCGCTATCCACGTCACAACAACCACAATCACTAATCATAACAACAAT TACAATCACTATTTAAAGTAGTGTGAAAGTCTTTTAGTTTAGAAAAATGTTGTGTGCCTTGTTTTAAAATACTGACTGTATCGCATGATGCGTCCGCAAT ATTGCGGTTGCGGTGACCGCCGCAACCGTATCACACCGCAATTGCGTATGATACTGAATCACAGTAGCGCAATCGTAACAGGCCGCAAAGCAACTGCATT TAGACTGCATTGGGCCGCATCGATGTCAAAATATATTTTTACTCACAAAGTAATTTACACCGCAACGGCCACAAACCGTATCGCAACGGTTACAATGAAC GCAATCGTAGTAACCATAACCGTTACCGCAATCGCAATCGCACTTTAAAACAATCATTCAAGAACATGGCAATTTCCCCAACACTTTTTAGATGTGTGCT TTAAACCTGAAAAGTGTGGCGAATCTCCTCGGTGAACTAGAAGGCTATTTAATTTATGGGATGACACATGAATAGTAATTAATAAGCAAGATTTTGTTTG CATATATTTGTGGAATAACTAAGACTAGTTTATGCAGTAAATTGAATTGGACAATTGATAGTAAAACTATATGCACAATTTCTATACTATTTGAATGAAT TTTTTAGCAGGTTGTGGAACTGAGGGTTTCCTTGCACTGCAAAGGATGTGAAGGAAAGGTGAAGAAACACCTCTCTAGAATGAAAGGTACATAAGTAACC TCCATATACATTTCATCAAAATAAACGGTTCACGTGAGAATAATATGCTACCGTTGAGAAATGAGAACAATTAACATGAACTTTAATCTAAATCCATAAA ATTGTTAATTTTATTGGCAGGAGTTACTTCATTCAACATAGATTTTAAGGCAAAGAAGGTGACAGTAGTTGGGGATGTGACTCCATTAAGTGTATTGGCA AGCATATCAAAGGTGAAAAATGCTCAATTTTGGCCAGCATCTGCCTCAGTAGCTGGATCTGGTTTTGTAGAGACTAGAGGAAACTTTTATATCTAATTTA GAGGGAAGTAGAATATTGATATTGATGTATGCTTTGAGTGTTAATTAGATAGTAATTTAATTTTTGTAAATGCAAATGTGAAGTGTTGTTTGGCATACCA TATTTAAGAATAAATTTAGCTTTCAAAATTGAGTGTAGAATTAAGTATAAGGATTTATACTTAGGCATCATATCATTTATCATTCATTTGAATTATTTTT TAAAGGTCAGTAATAATTAAATATGAATGATGAGTGATACAATAATAATGTATAAAATTCATACACTTATAGTATATATGTTTCTTCAATTTAAAATTTT TGTAGAGCAGGA BLAST |
Tissue | flowers |
Gene name | LI_gene_53539; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_126487
Blastp | Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 from Arabidopsis with 56.25% of identity |
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Blastx | Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 from Arabidopsis with 89.74% of identity |
Eggnog | heavy metal transport detoxification protein(COG2608) |
Kegg | Link to kegg annotations (AT2G37390) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443024.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |