Id Trinity | FTRINITY_DN55758_c2_g1_i4 |
---|---|
Name Transcript | Ll_transcript_191283 |
Sequence | TGAATATCCGCCTCGACTCAAATCTAAAAATAAACAAATGAGACTACAGATAATACATTATCCCAACTCATTGCAACCAGCTCAAAATAAATGGGTAAAT CCATTATAATTATTATGGTTGATTTATGTATTTATTTATGAATTATCCTAATTAATTTATAAAGTGGGGCCTTGGAATTCTATTTTGTGAGAGGCCTATT CTACACAGATAAATAACAGCCCAATTTCAAACCTAGTACTACATTCTGTTATCGAAGGTGATTGTTGTGTTACTCAGCAAATGGAGGATTTGAAGAAGAG AAAGCTAGAAGAGCATGGCAATGGTGGTTTCGCTTCCAAGGAAGACCTTCGTTTTCTTCTTGAACCCCTTTCTAAACCTCAACTCGTTGATCTTCTCACC AAACTGCATTTCAAGAGCATGGAGAAATCGAGGAAGGGGCTGTGATCTATGATAAAACAACATCGAAATCCCGTGGCTATGGTTTTATCACTTACAGAAA TATGGAGTCAACCCAGCTAGCATTGAAAGCATCTAACAAGTTAATTGATGTGAGCTTATCCTGTTTTGTTGCTTTGGCATGAGACCACCTATATGGCTGT ATGACTTCATGCGTGAATCTGAAGTTTCATTTTGGGAACGTTATTATTACTGATTTTGACTCCTTGAAGTTCTTAACACCCATGTCCATTTTTTCAAGGC AAAAGCATTTGTATTTCTAAGAACAATTTGCCCTCTTCCACCCAAACCGTTGCATTTTATTAGGAAATTTTTCACTTTTGGGGTTTATTTTTTGGCAGGG TTTATGGTTAGTTGGTTGCAGATGACTGATCCGTGGTTAGGGTTTGTCACTTTGTCCACCTTGCACATTTGTGATCTATAATGTATCACTCGGCTAACGG TAAGGTTGCTTGCCTTGTGACTTTGAGGTCATGAGTTCAAATCCTGGGTAAAGCTTCTTCACTTGTAAGGGTAAAGTTGTGTACATCAATCCTCCCTAAA CCCGACTAGGTAGGAGCCTTGTGCACTGGCTCACCCTTTTTTAATCACCAACTCTTGCTGTTCTACCATTTATATTAATAGGAATTTTGAATTGAGAAAA CATTTCGGCAAGGTCGTATTTTTTTAAACCAAAGAATCATAACAAATAAAACACAGACCGGCTATTCTTATTTGGCAGTTTCTTAATACTTCTAGTGTTC CAATTAGTTGTATAGAGGTGTCTTATTCTGTCGAGATCGGTTTGTGTGTTTTTTGTAGCTGTCATTGCTCTATTCCCCTGGTTGATGAGATTTCTGCTTG CAGGGAAGATTGGCAGTCTGTAATCTAGCTTGTGAGGGCTTAAACGGAACAAGTAATGCTTCAGATCTTGCTCTAAGGAAGCTTTATATTGGAAGCTTAT CACCAGAAGTCACAAGTGAGATGCTACTTAGCTATTTTGCAAGGCATGGTGAAATAGAGGAAGGTTCAGTTGCATATGACAAGGATACAAATGAATCACG GTAAATGTAGCGACATGATTTATTTGGATGCGATATTGTATTGTCTACTTCTTTAAGTGGCTTTTCCTGTAATCTATATTCCAATTGTTTTATTTCCATT TGTAGTGGTTTTGGCTTCGTTACATACAAGGTAGCGGAGGCTGCAAAGAAAGCCATTGACGACCCAGAAAAGACTCTTGGGGTAAGCTTAACACTAGATT TTTTTTATCAATCTGGAGGTGAGCTGTGAATGTAGGACCTGATTATTTCTATGCTCACATAATGTCTTGGAGTTGCAACAAGAAGACGGAAAAAACATTT TTAGTGAAAAAAACATCATATTGGAGGAAGTTCTTTCTTAATTAGTAATTATCTAATGGCACATACCACTGGTTTGATCCGTGGTCTCACCCTCAAACCC TGTTCTTATCGGAGTAGAGCAAATAATGGAAGGGGTTCCAGTTCAAACTCTAATTGATTGTATGATTTGGATCATATAAAGGTAGCTTGTCGCTAAAGTG AGCAAGATTAAATCCACCATTCCACCCTTTATTTGATATAGTGCATCAAAGTATGATAGGATACTGGGTTAGATAGTGTTTGGGGTGAATAGGATGCATA TCATTTGTCGGATCCAAGCCCAGAGACCTATTGTCTGGAGAGTTTACACTATTAGGTAGAAAGGGGGATTGGAGGGGAGAAGAGTGAGGGTCATGCTTCT GTCTTTGAGTTTGTTAGGCAGAGAATTGTTCTCCGAAGGAACCATAGGCTGTGGACAACAATCTATATTGTTTCTTTACCTTTGTAAGAACTCTTCAACT TCTCTTTTAATTGAGTTCCAATACTGTATCATAATCTTAATCCACTAAGTTATTTAATGGTAGATCCACTCTTACTTGCTCTCTTAAGACAAGCTTTCCC CCGAATTATAATGCACTTACGAAAAATGGCTACCATCATTTGTTTGATTGAAGTTGACAATTCCTCAATTATGTAAATTTTATCATACCACATGATGTCT TTTGTGATATAAATTAACTTCCCTGTATTCATATATAGCCTGCAATTTCTTAAGGATTATGAACATTGAAGCAATTACATATTGTCATTGAATGACATAG TATTTATTCTTGGTTGATTGCAGGGGAGGAATATAATTGTAAAATATGCTGATTCTAACAAGGGTAAAACTGGGCAGCAATCATTTCCTGCAGGAGTGGT TCCGATGGCACCCTTACCTATGGTCCCAGGATATGTGCAGCCTGGAAAAGCCCAAGGCGGTGCTGCCGCCCCAGTTGGTTACACTTACCCCCAAGCTGTA GCTCCATATCCTGCATCTTCTTATCCAGGCCCTCCTGTTGCACCATCTCCTTATCCAACACAAGGGCAGGTTCCGTATCGTTCAGTTTCTTCCCAAAAAG ACCGACTCGGGTTCCCGCCAGCACAACCCGTGGGAATGAACAACTACCCTTATTACTATCCCAAGCAATGAATGTAGTTGAACCAAATATGGCGACTCTT GGCTTTCCAGTTCAGTTCTTATTAGCCAGACCCTAGTTCCAGCCATATCATCATCAGTTATTTATGATGCTCTGTGCTGCACCTTCCTTTTTTTTCCTAT GTAGAAGAATTTTGACATTCTTATTTTATGGTAATACTAGGTCAGGAATTCCTGTGACTAGAACAAATGTTGTATTCTTTTTCTTCTGAATATTTTAATT TTTATCTGCCCCAACTGATGGATGCATTTAAGCAAGGAATCTTAGATTTCAAATCACTTGCTATACTTTGTAAGGATATTTGGTTTCACTTTGAGGGTGA TCCAGAGGTATGAGTCCAAATCTCGGAAACAATGTGTAAATCTACTCTCCTCATACCCCAAAACTAGATTGGTCATATCTTCTCCCAGTTAGGCTAGAGT TAACTTGATTTTCATTGGCATGATAATAAAGCCATAAGCAGTAATAACTATGCAAG BLAST |
Tissue | flowers |
Gene name | LI_gene_54196; |
Additional information | - |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_191283
Blastp | - |
---|---|
Blastx | UBP1-associated protein 2C from Arabidopsis with 28.12% of identity |
Eggnog | Rna-binding protein(COG0724) |
Kegg | Link to kegg annotations (AT3G15010) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_020213092.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |