Id Trinity | FTRINITY_DN55808_c2_g1_i1 |
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Name Transcript | Ll_transcript_267969 |
Sequence | GGGATAACAGTAAACAGAAGGATCTAGAACAGAAGCTTCGAAGCAGTGCTTAAGATTTGGATTGAAAACAGTACAAGTTGAACAATGGATGCAAGGGAAG TTGAGAAGAAAGCAAAGGAAGCATTTTTCGACGATGATTTCATCGCCGCCGTTGATCTCTACTCTGAAGCAATCCTTTTGGATCCTAACAACGCCGATCT CTTTGCCGATAGAGCTCAAACTCATATTAAACTCAATTGCTTCACTGAAGCCATTTCTGATGCCAACAAAGCTATTCAATTCAACCCTTCTTTGCCCAAG GCCTATCTTCGTAAAGGGGTTGCTTGTATTAAGCTTGAAGAGTATCATACTGCCAAGGTAGCACTACAAACTGGTGCATCTTTTGCACCAAATGATTCAA GATTCGCCAAATTGATCCAAGAGTGTGATCGTTATATTGCAGAGGAACCAGGTAGTCTTACTAGCACCTTATCACCAAATGGGCCCGTAGCGGCTGTACG ATCGGGTGATACAAGTGCTGTAACAACTAAAGAAGCTGAAAGAGACAGTTTGGTTACCCAAATCAATGAAGTCGCGTCAACGGGACCAAAATACAGGTTT TCAATTTTCTTTTCCTTTCGTCTATGCTGCTACTTTTAACTCATTAACTCTGTGACATTACACTTTGTTGTCTTCTCATTTTCTTTGCTTTTCTTGTTTG TTTAAAGTTCCCGTGATTTCCCTTGGAGATGGATGGTGTAGGAGGCAAAGACAATTGTTATAATAATCATGTAATCATATTAATAGAAGATTTTTATGGT TATAGACATACAGTTTATTGATCTACCCAATGACCGAAATTTTTCATCCAATTATGGTTTTTTAGTCTCCCTGTCTCTCTCATGTCTGTATAAATCTTTG TATGTATGTTGAAATTGCTGCCTCAACTATCTGGTTACTTGTCAATTAATGCTTTAACAGACATGAATACTACCAGAAGCCAGAAGAAGTGGTTGTCACA ATATTTGCAAAAGGGATACCAGCAAAAAACGTGGTCGTTGACTTCGGAGAACAGATTGTACGTTTATATGGCCGGTGCTTTTTTTCTTTCACTTGCTCTC GAGAACTTTCACAAATAGTTTATATACTAACTTGAATTGCTTTAATATCTCAGCTGAGTGTTACTATTGATGTACCTGGCCAAGGTACCTACCATTATCA ACCTCGATTGTTTGGAAAGATAGTACCTGATAAGTGCAGAATTGAAGTGTTGTCAACTAAAGTTGAAATCCGTCTTGCAAAAGCCGAAGCTATTAATTGG ACATCTCTAGAATATACAAAAGATGTGCTTCCCCAAAAAATAAATACTCTCACAGTTCAATCTGAAAGGCCTACATACCCATCATCAAAGCCAAGGACAC GAGATTGGGATAAGTTGGAAGCTCAAGTGAAAAAAGAGGAGAAGGAAGAAAAGCTAGATGGTGATGCTGCTTTGAATAAATTGTTCCGCGATATTTACCA AAGTGCAGATGAGGACATGAGGAGAGCTATGAGCAAGTCTTTTTTGGAGTCAAATGGAACAGTGTTGTCAACTGATTGGAAAGAAGTGGGATCAAAGAAG GTAGAAGGTAGTCCTCCAGAGGGCATGGAATTGAAGAAATGGGAGTACTGATTTTAGTATTTCAATACCCAAAAACAGTGAATAAATAAATCCTGAAAAG GGAAAGAGATTCTGTAAAACCCTTATTCTTAAAGAGTTTTCTTTGTGGTGAGAATGGCCTAATTTGCATTTGCACTGGAAATGGATTCTATTTTGCTAGC ATATGTTGATACAATTACTGTTTTAACCAATCTGAAGTTATGATGAAAGGTGAATTTTCAGTTTCTTTTTCATGGAGTCTCATTTCATGTTTACTTGACG GGATAATATTAGGGGTATTCATGTACCTTTTCAACAAAGATCACAAGTGTATTTTATGACTCTTGGACTATGTTATTTCCTCCGTTATCCCTAAAAAATC AACAATTTAGTCTGCCACCTATTTTAAGGTTCTAGCCAGTGCAAGCAATCAGTGAAATAAGAGTCTGGACACATATACCTAGCTTTAATTCTCATAGATT TGTGATTAATTTGTAATGATATACAACATTTAATGTCATCATACAAATTATTTTGGTTCTTTCCAAATAACCCA BLAST |
Tissue | flowers |
Gene name | LI_gene_54627; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_267969
Blastp | Protein SGT1 homolog B from Arabidopsis with 63.78% of identity |
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Blastx | Protein SGT1 homolog B from Arabidopsis with 64.66% of identity |
Eggnog | Suppressor of g2 allele of skp1(COG5091) |
Kegg | Link to kegg annotations (AT4G11260) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422379.1) |
Pfam | Tetratricopeptide repeat (PF13181.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |