| Id Trinity | FTRINITY_DN55818_c1_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_266939 |
| Sequence | TGAACATAGCCTAGTCTTATTTTACCATTATTTCCAACAGTGTGAGGAAGGAGTCATGAGAATTGAGCAGCATCATTTCCATATACTTGGTCATCATCTT CACCTTCTTCTTCTTCTTAGTGTAATTGAACTGCTTCAGTTTCTTTGACACTATAAATACTCATTCTCATTTCTGAGTCATAACAAGTCTTCATCATTTT CCCGCAGATATAGAAGAAAGTGTGTACACACGTCATTCCTTAACGTGCGCACCCCCTGCGTATTGAAATGGAGCCTCACACTTCATCATTTGTATCCAAA GCGAGAACCGCGCTTCATTCTGCGGCTGCGAAAGCGGAGCGTGTTCTCAATGACTTCAAATCCGATCGAGATTCTGATAAACAATCGAATGATGATTTTG GAGGGAAGCAGCGGCATGAATCTCCTCGGAATGAGAACGAGTCTAAGCTTCTCAGTGAATTGAAGCATATAAAGTGGAGACCACCGCATATAGGAATAAA GCAAGATTGGCAAGATAAATTTAACAATATTCGGAAAGGGAGAAAAGAAGTCGAAGATACAGATAAAATCCGAGACACAAACATGGCCGCTGTTCCATTT TACGATGAAAATTTGTACATCCTGAATATGAAATATGATGCTGATATCAAGGTAAGAACATCTTGATCTTTTTAAGTCAAGGGTTATGTCTTCCAATTGT GCATTGAAGTTTCTAAACCAGGCAGTTGTGTCAAGAAATTGGAAAATCTGATAATGTACTGTGTCACATTAATGACTCATAAAAAGGGAATCCTATTCAA TGCATGGCATGCTTGTGATGAGTTAGTAATGTATGCTAATTATTGATCTCATGGTTAACTAAGTGCCTGAAAACTCTTTTCAGTAAGTTGAACATATTGA TATTTGTTCATTTATTTTCTGACGCAATTATACAAATGGATAACATTAGTGATGGTTGATGAACAACTTGATTTAGGCTTCAGAAGCAATTCCCTCAGTT GAGGGCTTAATTGCCGCGACTAAAGACCCTATTCCTCCATCTTCTGTCATGAAGCAATTGGCTAAAGCTGTTGAGGCTGGAAGGAAAACAAATTCAATGA AAGATTTTGCAGCTTCAACTGAAGGTTCTTCACCTGCCAAAGATAGGGCAGGCTTAACTCTCTCTGCAATGAAGGCTTTAGTGTTGCGAGAAAAGGAGGA TAACCTTACCTCTGAGTTTAGTAGCAATGAGAAAGTTGGGCTCTTGATTAATTCTCTGTTTGATCCAGTTGGCGAGTTCCTCAAAAGGAAGGTAAACTCT TATCCAGATGAAGCTTGCATGACAGCTTTGCCAAGTGATATTCATGGTGCTCCTCCGGAAAGCTTGATTGTTAAGTTAGCTGAAGTCATTGGAAACTTCA AGACGCTTAGAAAAATGGGTCTTTTCTGGTGCAGGATTGTTGTCGAACTGCGAAAATTTTGGTCTGAAGAACAATATTTACCTGGAGTTCCCCCAGATGA CATTCCAGATCTGAAGTCATGTCTTCTATATCAACAATTTCAAGTAATTAATTGTTGCATCTCTCGGAAAAGGCGTCATATTATTGCAACCGAATCTCTT GATTCTCTGATGATGGAAGCCAATTCAAATGTAGAAGAATCAGAAAACAATACCAAGAAAATTCCTGCAAACCATTTATTATATGCTAAATTAAGTACAG GGGAGCTTGTTCTTCGACTAGGTGCCGAGTGCCCATCTGGAGATATGACGTTGTTGGAAACTGGCGAGCCTGTGTACTCTCCTGTCACTCAGGAAGGACC TCTGCTTACAGAAGATCTTATCAAAGAGACTGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGCGCTGGGTGCTCTCATCTCCTGTCTGATATGCAGGCT TTCAAGGCTGCAAATCCTGGTTGCATTTTGGAAGATTTTGTAAGATGGCACTCTCCTCCTGATTGGACAGAAAGTGAGGCAGGTACTGTGGACAGTGATT TTTTTGATAGTAGTGAGTCGTTGTCCACCAGAGGTCAGCTAAGTCTGCGAATGCAAAAAGAAGGCAATTTGTGGCGCGAATTGTGGGAAACTTCTAAACC AGTACCAGCTGTTAAACAGGCACCTCTGTTTGATGAGGATTTGGCAGTGGAGGGCATCCTCAATGCATTTGAGGACATTCGGCCTTCTGAGCTTTTTGAA CAGCTGTTTATTTCTTTACTTGGTGTAGGATTAGCAATTGCTGAACCTATGCTGTCTGGTGAAAGTGACTTCTCAAAGTTGTTCAATGACTGCAAGGATT ACGTAGTTACGACTTGTCAAAGCAACAAATTTAGTGAGAAAGTTGATGAGCTTGTTCAGGTGGGGGTACTAGAAGAAAATGGGGCTGATTTATGATTCTA CTCGGCATCTGAATTAGTCCTAGTATTGATTCTCTCAAGTAAATGTTCAAATTTTCACCAGTGCAGTGAACTCCAAAACTGCTTTATCCATCTAATTGAA CAGTCTTTAACTATATAAAGAGGAGCCTTGAGGAAAAAGGAACTCTTTGGGACTGGTCAAATATTGAGAAATTTGATACCATTTAACCAATCCTACTTTT TTATGTTTAGGTTCACTGACTGATAACTCGACCCGTACGAACATGGCAATGAAAAATAATTCCTCTGAAAATGTAGACTGACAATGATACTGGAAGCTGA TGATTTTTATCTTCCTATTCTAAATTACAGAACAATTGTCTAATGGTCACATGATCACATCTATGTGTAGGTATATGAAACAGTGGAGAAAATGTTACTG AAGCCTGAGGAAGTAATAAAGATGATGAAGAAAGCAGAAGAATCAAGTATGACTCCTGGTGAACCAAAGCGTCGGTTTAAGAGACTCCTCCTTATTTTTG GGGGTAAAGATAAAATGCTGACGAGTCCGGTCTCGAAGGATCAGACTAACGACGAAGAAAACCCGTTTCGACAATCCTTTTCCAGTTTCTTTGACAGCAA GTCATCTTTATTTTCGAAGAAGCCTCCTAAGCATGGAAGCCTTTCCCCTGCTGAGAATCCTCATTGTTTGGAAAGTGATTGGAAACTTGTCTAGACAGAG TTCAGCCTCACCCTATTTATGATAAGCAAACATGTTTTTTTGTTTTTTTGTCCCTAGCCAGATCACCGTAAATTATTTTTGTTTATTCCTTTTTAGTGAT CAACAAATTTTAATGCATTCTTAAATTACCTAAACTATTACTATTTTTTTATATTTTTTTGTATAGCATTGCTTCTTGGTGAGGGATTGTACAAGGATGA TTAGTCAAATGGTATAAAACTTCCCCGTTTCCTGCAAATGTCACGTTGCTTTTGAATATTTTCAAAGAATGCTGTTTTCCCCACTCACCCGTGTAATTCA TTTTTAAGCTCAATGTACACCATGAAATTGTAACAATTTGCTTTAGTCTTATAAAAAAGGGTTGGGCAAATATGTAGTGAAAGAATTTAGTTTTAAAACA TACCTCTTATGATGTTACTATTTCCTACTAGTACTTTGAGGTACGTTTGCGAGTTGGGTTTTAGAGGAAAATGAAAGACTTCAACGTCTTCTTTCAAATG TATTTCATAGCTCTCAATTTTTAATTTCTTTTCCTCTCTTAAATGCAACCCGAAAACATACCCTAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_54724; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_266939
| Blastp | Rab3 GTPase-activating protein catalytic subunit from Rattus with 32.19% of identity |
|---|---|
| Blastx | Rab3 GTPase-activating protein catalytic subunit from Sophophora with 31.07% of identity |
| Eggnog | RAB3 GTPase activating protein subunit 1 (Catalytic)(ENOG410Y2R4) |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002243) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440686.1) |
| Pfam | Rab3 GTPase-activating protein catalytic subunit (PF13890.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |