| Id Trinity | FTRINITY_DN55844_c1_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_268408 |
| Sequence | ATTCATATGTAAACTACGTCGTTTCAAAGCTCAACTGATACGACGTCGTGTAGCAGTAGTTTGCAGTATGCGAAAGTGAGGGAAATCTGAAGAAAAAAAA GATTCATATTTCTTTGCAATGGAATTTTTTTTGATTTTTAATGAAGAGAATTTGAAACCCTAATTCGTGAATCATAAAATCTTGAATTGTAAATGGACGC TAAAGATATTCTAGGATTATCCAAAAATTCATTCCCAGCATTGGAGAAGAAATCTCGTCCTCACAAAGAATCTCATAGAAAACCCGATGGCATTTCACGT GAGGTATATGCACTTACTGGTGGATTGCCATCTCTTATGCCTTCAATTGACGCCTCTCATTTGAAGAAAAAGCCTCCTTCTAATGAAAAGATCACTTGGC AATGGCTTCCTTTCAGTAGTTCCGCTCGTAAAGATAATCTTCAACTTTACCATTGGGTTCGGATAATCAATGGTGTTCCCCCAACGGGAGACTATTCCTT TGCTAAGTATAACAAGTCTGTTGAGATTATCAAATACACAGAGGAGGAGTATGAGAAGTATTTGACAGATCCTGTATGTATTGTCTCTAATTGTACACTT TTATGGAACTTCATGTATATGTTTGCTTGAACTGCATGTTGCAATTTTTATGCTACCCGAGAACTGAACTTTAGTCACTGTATTAAGGTTAGGTTGTGGT GTCCTCATTGGTTTTTTCCCAATATTACACATTGAAAGGTCTATTTTTGTATACAATTTTAATTTTATTAAATTGATAGTTGGAAATTACCTATGGTGAA GCTTATACATCATTTTTCTGAAGAGGACACTGGTCTATCCCTGTGCAGGCTATTCACAGTGAGCTTTTATGGTGCCATCCTAGGGTTGTTTTCTTTATTC CTTGATTTGACACAGATTTAGTTTAAAATATTGATAAATCCTCGAAACTCAAGAGAATAGTGTGAACTCGGATTAATATACAAATTTGTGGGGGTATCAT GATTCCATATGCATGACCAGGATCATGACATTCATGACTGTAATTAGAATTTGGTGAGTTAAATTTGACTCACATTTACTTCTACCAAGGATTATCTTTT GAGGCAACTGTGTATACACCTATCTGTTTCAATAAAGTTTAAATGCTTTGCTCTCTTCCATTATGCTTTATCTATGTAGATGTGGACCAAGGAGGAGACA GACCAACTATTTGATTTGTGTGAGAGGTTTGATCTCCGATTTGTTGTAATAGCTGATAGGTTCCCGTCATCTCGGACTGTAGAGGAATTAAAGGATCGAT ATTACAGTGTATGCCGGGCTATATTAATTGCTAGAGCTCCATCTTCTGGGGATGTTGCAGCAAATCCTCTTGTTAAGGACCCTTATAATGTTTCACAAGA TATAGAGAGAAAACGAGCACTGTCCATGGTGCTCTCTCAAACAAGGCAACAAGAGCGAAGAGATGAAGAGGTTCTTGTTGAAGCAAAAAGAATAGCTGAG TTACGCATGCCAGCTAAGGCTGCTGAAGAGTCTCAGTTGGCTGTTGCCTCAAATCCTGGTGCAGAAATTACAGAGAGGATTATCCCAGGTGAAACTCCAT CTTCATCAATGGTTGTGCCTTCCACATTAACAGATAATGCAGCAACTTTAGCTTCTCTTCGCACTCTTCGTGTATATTTGAGAACATACGCACTTGAGCA AATGGTGCAAGCTGCGAGCTCATCTGCTGGGCTTCGGACTATCAAACGGATTGAGCAAACATTGCATGATCTTGGGGTCAATTTGAAACCAAGGGTTCCA ACAAAAGCTGTTTGCGCAGAGCATCTTGAACTAAGAAAAGAAATACTAATTTTACTTAATCTTCAGAAGCAGGTGAAATATAAAGAGGCTGAAGGTTCAA TTCGTGATGGGTTATATGGGGAATCACCAGAAACACCAAAGGATCAGACATTTATTCCAGAATCCATGAGCTTTGGAGGGGAAAGAGTTGGCAAAAAGGA CCACAAGCGCAAGGGACCTGGAGCTCCATCACAATCTGCTCATAAAAGACCAAGAAAAATGAAGGCTTCAGATATTTAGTTTCAGTGTAAGGGCATAGAT ATTTAGCTTTAGATGACATAGACAAGACTTATTAAGCTTCAGATATTTAGTTTCAGTGTAAGGGCATAGATATTTAGCTTTAGATGACATAGACAAGACT TATTAAGCTTCAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_54954; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_268408
| Blastp | SWR1-complex protein 4 from Arabidopsis with 64.22% of identity |
|---|---|
| Blastx | SWR1-complex protein 4 from Arabidopsis with 64.22% of identity |
| Eggnog | DNA methyltransferase 1 associated protein 1(ENOG410XSA4) |
| Kegg | Link to kegg annotations (AT2G47210) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422059.1) |
| Pfam | SANT/Myb-like domain of DAMP1 (PF16282.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |