Ll_transcript_268430

Id TrinityFTRINITY_DN55872_c0_g1_i16
Name TranscriptLl_transcript_268430
SequenceAAAAATAACATGAATTTTTGTTGCCCATGAAAGACACGATCCTCTCCTCCTTGTGCATTTTCTCCTCCTTTGTTTCTCTCTCTTCCCTGTGTTCTTTCTC TCTCCTCTTCCCTGTCCACCCTTCCGTTACCGATTGTGATCAATTTCTGCATCCTTCAGTTTCTTTCAACGGTAATTGGGGGTTTCTCCATCAAAGTTTA AACTTTTTTGCTGCAAACTCTGTTTTTTGTGGCAATCTAGGGTTAAATTATCTCCATTTTCCTTTTTTCCGATGAAAGGAATGAACTTGCATTCTTGGGT CGTCACCACATTCACCGGATTATAATTTATGAGTTTTTTCTTTTAACCCCAGTAATAAATTTGACTTGTTAATGTAGAAAAGGTTAAAATTTTATTTTGT TGTGAATTTTCAACAGAGTTGATTTTGGGGGTGTTCCTGGTATGTTATATTAGTCTCTGAAATTTGGAAGCTGCAAGCTTTTGTTTTGATGATAATAAGG ATTAATTTACGTCAACAAATCTCTACACTATGGATCAGATAACGGATTCTGAAATGGATCAACGGAGGCAAGGATATTTCCATTCTGAGCCCGGTGTTGT TTCGAGAGGATCCGCGAGTATCTCACAGCCGAATATCCGCACAATGGTGGCAGCTTCAGGGACCACAACCAATGTCAATTCCTACTATTTACAAGATTCT CATGACAATACTGGGGTGTATGGCTTGGCACAATACAATGGCATTCAGCCTCAACATAATTTTGACATGGGTGGTGCTGCTGCAGCCAACATATATTATT CCGGCATGAATCCTTCTTCTAGTACTGGCGTATTTACCACTTTACCTCTAAACCACCAAGCCTCTGATCAATTGCCTGGTTCGAACACATTTGCGATCTC TGGAGGTTCTTCAGATAGTTTTGGAAGAAACAGCAGCTTTGTGGATGATGTCAGAGGTGCATACAAAATGAAAATTGCTGAAGGGGTAAGAGGAAATCAT CAGTATTTTAATGCTTCAGCTAGTTCTTCCGTTGTGCCCCCTAATGCAAGACATGCCGATGGGATTGCTATGGACACTGCATCATTTTCCTTGCACAGGC CTTCACTTGTGGAAGTAGGACAGCATGGTGGTGGATGGAACAGGTCAGGTGAGTCTATTATGATGCATGACCAAAACCATTTGATTCGAGGAAACTACTT AGGTCAGCACTTTCCGCCAGCTCCTCGTCCATGGTTTGACCAGCAGTTAAACAATGATGGCCATACTACAGCCTGGAATCAGCCTCTTCCAATGCCTTAT ATGCAAGCACCAAATGTTAATGGAAGTTCATTAGAGAATGCAAGTATGGGTTTGCAGAGATATCATGATACAGCCAACAACAGAAATGGTCTCAGGTTTC CTCATCCCCCTCCTGCCAACCACCCACACCATAATTATCTTCATCCGCCACTACCTATGCAAGGAGTGAGAGGTCATGCTATCAACTTTCACCCTCCGGC AACTGCAGCTTCATTTAGAGTTCCTACAAATCCTTCACGAGGTGCTGTGATCCCCCCACAGACTGGTTTTGAGATGATACCTAGGCATGTTGGTCCTGTA CCGTCAGCAGGCCTAAGGATATACCGACCTCACAGATCAATCATGCCCGATACAACTCTCGGACATAGAAATCTTCCCCCCATGGGCTTTCTCCGAGTTG ATGATGGTGCTTTAATTGACGAAGTGGGAAATTTGGTTGACCATCACAGAGATATGCGCTTGGACATAGAGGATATGTCTTATGAGGATCTTCTTGCTTT GGGTGAGCGGATTGGCAAAGTAAGCACTGGTTTGTCAGAGGAAACAATTTCAGCTCAATTGAAGACGAAGACTTATTTAACACATGCTACCGCTATTAAT TTGGAAGAGGAAGTTTCTGATGATCAGGAATCTGATTCTTGTATGATATGTCAGGATGAATATAAGGATGAAGAGAAGATTGGAGTTCTTCGATGTGAGC ATGAGTATCACGCAGATTGCTTAACGAAATGGTTGCTCGTAAAAAATGTCTGTCCTATATGCAAATCAGAAGCCTTGACCCCTGAAATGAAGGACATAGA GAAATGAATGTAGCCTATATCTCTTTCTCATCCTCCCTATGCCAATCTTGGCTAATTTATTTTTGAACAGAATTCACATTTTGTTGTGTCTTTTTTGTAA ATCTACTTGCACATATATAGACAGTTACAGTGTCCAACTCATTTACTGTTGGCATCAGAACTTTTGTATGTATGAATTTGTACAGACTTTGTTTTGTTTG GTGTATTAACTTCAGGTAATTACACTATTACTGTTTATGATTTATTATTTTGATTGATATTTATGGTTGGAACTTTGAAGTGTCATGATTAAAA BLAST
Tissueflowers
Gene nameLI_gene_55266; 
Additional informationdetails; 

Expression of Ll_transcript_268430

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_268430

BlastpProbable E3 ubiquitin-protein ligase ZFP1 from Oryza sativa with 29.39% of identity
BlastxProbable E3 ubiquitin-protein ligase ZFP1 from Oryza sativa with 38.76% of identity
Eggnogzinc ion binding(ENOG41121N2)
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019425908.1)
PfamRING-H2 zinc finger domain (PF12678.6)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;