| Id Trinity | FTRINITY_DN55900_c2_g2_i9 |
|---|---|
| Name Transcript | Ll_transcript_248901 |
| Sequence | CGTGACACGTGGCAATATATAAAACCTATTGATACGTCACCCCAGTGGGCACCTCCAACACCAACGGGTCATTTTAAAACGTCACTTCCTCTCTCACAAT TCTTTCTCCTCTCATCTTCTCTTCTCTCTCGTCACGTTTTCAATTTCTCTTCATTTTTCCATTTTCTCCGGAACCGATCTCAGATTTCCCTCACTCTTCT CGCCGCCACTCCGCTATTATCCCTCCATTTTAAAACGCTATCATGAATCCCGAGTAGTATGTGCCGTTTCCCTCTCCGCAATACTCAGTATCTCGTTGCG AATCGTTTACTTTGTTTTTTTGTAAATCAATTTTGTGTTGATCTGTTTTAATTATCGTTCGGTGATGTTAAATTTTGTGTTATGTGGAGTGCTGGTTCGA TTTTGTTATGAAATTTCTGTCGGTGCTCGTTTCTGATCGCGATTCAGAAAAATATGTTGCTGATTTAGATCTGTTATATTGTTGATAGATCGATTATTTA GAATTGTTTGTTTTTCTGATCCGGTTTGGGAAATTATTTTTTTGTTTTATTTTGGAATGGTTTTGCTTAATTTTATTTGCAAGGGTGATATAACTGCAGG TTTTATTTTGGGTGTCTAGAAAAATATTTGAACTTTTCTATTAGCTAAACATGTCGGAGTCATAAGGATTTTGTGATTGCTGGGGCTTGCGAATATATGC TAAAATTGATACTTTTAAAGAACGGGAATAATAGTGAATATCTTAATCTAGTTATGTGGGGAGGAACCACATGATTACTGATATTGTATTCTAGTTAGAA ATTGTTTTTGTCTGATTCTTCTGCAAATAGGTTTTTAAGCAATAAATCTGTTTGTAGTTTAGTGTTTGTTGAAGACTTTAAGTTATATAGATGGGTCTGC AAGTTTGATAGTTGACTGACAAGTGGTTCTCTCTAAGATAATTTGGTTTATAAACTTGTAGCAGTTTTTAATTGCTGAGTTCTCTTTAGGGCAGTGATTA AGGAATCAATAAAAAGTAAGTTCTCGCTTGGAAACTGCAAACTCTGCTTTTTAATTTATACAGGATCGAATACAAGTATACAACTACTTGCAATAAAATT TTACTTCCTGTGATTCCTTAGCCAATGCCCTGGTTATCATACTCAAATGATAAATGGGAAAGAGTTGTGTTAGGCAAAAGAACACAACTTTTGTACAAAA CTATTCAATATCATATGCTTTTTGTGCTGACAATGGTTGCACAAGTCTGGAGAGACATTTAATAGTGCTGAATGTGTTGTCTGTGCATGGCTAATCATAT TTTAATGAATGTCCGATATACGTAAAGACCTATGACCTTTTAGAAATGTCATGTTTACCGTGTACTATGGGCTGTGGCACATGTGCTTGTTTACATTGGC ATATTGCTATGTAATGCTCATTCTCTTATAAAATTTATAGACAGTTCCTCATCATTTCTCTCTCTTTGATTGGGCCATCACTGCGTTTATTTTTTGCAGT GACTATTTATTCAAGCTTTTGCTTATTGGAGATTCTGGTGTAGGCAAGTCATGTCTCCTTCTGAGGTTTGCTGATGATTCATACCTTGACAGCTATATTA GTACCATCGGAGTGGACTTCGTAAGTTTTATATTCACCAATTATCCTCATTTCAATGTTATTTTCACACAAATGTGACTAATTATTGACCTTGCTATCTT ATGTAGAAAATTCGCACCGTGGAACAGGATGGGAAGACTCTTAAACTTCAAATTGTAAGTCCATGATGGTATTAATGCTTTTTGGAATTAGGATTTTAAG GTTTGACTCACTTGTTTTTGGTTCTGATGGAAATGTTTTCACGATTATGTCACATTGATTTTTTCACCAGTTACATAAATTGTCTCAATTACTTAAATAC ACCTTGAAAACACACTCAAACTAAAGTATCTCATTTGTACCCAAGAATGTCTCTATTTTTAATTTGGAAAATGTTCACCTTACACCCCGATATGGAGTGT AAATAGGTGTAGAGAAGAGAGAGAGAAAGTGATAGATGTGATTGGTGGTGTGATATGAATGAAAGAGAGATATAAGAAGGAATTTAAGGTGCAAAAAGTG AGGTAAGAGAAAAAGTTGTAGGAATATATAAGTTACTAATGTTTGATGTAATTACCATATGCTTCATTCACCAAATGTACCCTTTGTGTTTTTCAAGTAT TGTCGCCATGTTGACATATTTTATGCATTTTTAATGTATAGTGGGATACTGCTGGTCAAGAACGTTTTCGTACAATCACTAGCAGCTACTATCGAGGGGC TCATGGCATTATTGTGAGTCATTATATAATTGTCCTCCCCTAGCACGTTCCTTTTTAGATTTTTGGAGATTGGTGTAATCATGTTGCATTTTATCTTTCT TTTGCAGGTTGTTTATGATGTCACTGACCAAGAGAGCTTCAACAATGTTAAGCAGTGGCTGAATGAAATTGACCGTTATGCAAGTGAAAATGTTAACAAG CTTTTAGTTGGGAACAAGAGCGATCTCACGGCAAATAAAGTTGTGTCCTATGAGACAGCAAAGGCATTTGCAGATGAAATTGGAATTCCTTTCATGGAAA CTAGTGCTAAAAATGCCTCCAATGTGGAACAGGCTTTTATGGCCATGGCTGCAGAAATAAAAAACAGGTGCTGTATTCTTATTTGCATTGTTATTAACTG AGGTGTGAGAGAGTTTAGAGTTTAGTCTTACTTATAAAAACATTCCTATAAACTCCTTATAGCTTATATTGGAGATGCAAGTTATTGCTTTCCCTTTTGC ACTTAAGGGTAAAAGTGTCACATGATTTGGCTGAAATCGGTTTCCTCCATTTATAAAATGGAAGACATACCGTAATTTTGTGAAGAAAGGGCATCTTTGT TTTTATGACATAGTGAATTCTGATTTGTTAATGACCAAGAGGTATATATATACCTAGATGATTGACGTTTCTTGATTGTGGTTCTTTTGCACAGAATGGC AAGCCAACCCATGAACAATGCAAGACCTCCAACAGTCCAAATTCGTGGACAGCCAGTGAACCAGAATTCAGGTTGCTGCTCATCTTAGAGACCAAAGTAT TTGCGGTCTTAGAAGTCCTTTATATGTGTCTCCCTGGCATGTAAAACTAGTTTCTCAACTTTAATATCAAGATTGTTCATCATGATTTGCTACTTATCTT CCCGCTCGTTAAAACTTCAATTCTTTTCAATGTATTTCATTTTAAAAGACCATTTGTACAAAATTAGGAATATTGGTGAATAGTAGTATTTGCCTTGTTC TTTCTCCCATGCCACTTTACTACTTTTCTTTTATGTTTTTGGGAAAAACTAAATACAGTATGTTGTGTTATCTGTCATTAACTTTTTATAGGGTGTATAT ATTTCTTTAGGAAAAAAATAACTATAGAGTGACACTTGGAATCTTATACCATTTCCACTCACAAATATAAAAATTAAAATAAGAGATGCACTTTATGCGC TACTTTTCATCTGTTCAAGTAGCACAGCTGAATACATTACTTGCAGGTCCAAAACCATGTTCCCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_55473; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_248901
| Blastp | GTP-binding protein YPTM2 from Zea with 89.66% of identity |
|---|---|
| Blastx | GTP-binding protein YPTC1 from Chlamydomonas with 90.8% of identity |
| Eggnog | member RAS oncogene family(ENOG410XQN5) |
| Kegg | Link to kegg annotations (542396) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421974.1) |
| Pfam | Ras family (PF00071.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |