Ll_transcript_249971

Id TrinityFTRINITY_DN55973_c1_g2_i1
Name TranscriptLl_transcript_249971
SequenceTTTTCTCTCAAGCTCACATACTGATCGTCGGATAAAATTTTCAGGTACCTCCACCGACGGGTCCATCTTCTCTTCTCATCCACCTGCTCAACATTCTTTC TACTCTTCCTTCTCCTCGACGTCCAACAATCTTCTGCAACCGTTACTGTATCCTTTGTGTTCTAGTAAAAAACGACTAACATTAACACCTAAACAAATAA TACAAATGAATAATAAATGATATATAAATATTGACGCTACTAGTATATAGATATTAAACTCTTATTATTTTGTTATTAATAAGTACCATAACTCCATAAG TAATTATTTTCATAAAAAAAATTGTTTAGATAAAGTAAAAATGCATCTACAAGCAAAGAGTTTGGTAGTTGTGAAGAGTGAGATGAGTTGAGTTTAAGTG TACTATCATCACCAGAAACACAGAAAGGAACTGAACATCCTTAAAAGCACTTCAACATCTCAATCACATTCCTCTCTTTGGTCTCAAATTTTTCCAGGTA GTGTCACTGTGAATTGTTGTTGCAAGGATTTGCTTTGCAATCATGAGTTTTGTTTTCAGAGGAAGTAGAGGAGACATTGAAAGTGGATTTTCAGAATATG TTCCTGAAAGAACCACAATGCGTGTTCATTCGGCTCGGCCACATAGCAATTCCCTGGCTCTTCTTATTATAGTTTTATGTTTTTTCATGATATTGAACTC TCCTCAAGCAACACATTATTTTTTGCTATGGCTTGTGCTGGCTTTCTTTGCAATGGCAACAAGCATAAGGATGTATGCAGTGTGTCAACATCTTCAAGCT CAGGCTCGGGCTCATGCCGCAGCAGCCACTGGGTTAATTGGCCATACTGAATTACGATTTCACGTGCCACCATCATTAGCGATTGCAACTAGAGGAAGGT TGCATGGACTTAGACTTCAGCTTGCACTTGTAGACCGTGATTTTGACGAGCTCGGTATTATGCTTCTAAAATCCACCTTTTGACATTTGCCATTTGGTAT TTTTTTAGAATGAAAGTAGATGAATGCCTGTACAGCTTTCTTCTTTATGTACAAATGTGTAACATTATTCATATTACCTTTTCTTCATTTTGAGGTAGAT TATGATACTTTGAGATCTCTGGACTCTAATATTGCTTCTACTATTCCGTCAATGACCGAGGATGAGATAAATGCTTTGCCTGTTCACACATATAAAGTTG CAGATCCAACAAAGGATGTCACTGCTGGAATAGAATCTTCAAGTGCAGCTGAGATTAAACAAGACCATGAAGGATCAGAGGAGAATTTGCATGGTCTAGA AGATGAGCTTACATGTACTATATGCTTGGACCAAGTTAACCGGGGGGAGCTTGTTCGTAGCTTGCCGTGCTTGCATCAGTTTCATGCCAACTGCATTGAT CCATGGCTCAGGCAACAAGGAACATGTCCAGTGTGTAAATTCAGGATGGGGTTGTTGGCATTACAGAGAAACATGGATAGTGAATCTGATGGTTCTGGTT CAGATATTGTGTAGCACACTTCATAGTTCAAATACAGTTGTAAAATGGTGTCACTAGTAGTTATACACATATGTATATCTAAATATAATAATATTATATG ATGTGCTGCTACCTTGAACTTGACTTAAGCACAAGAATGTAAATTAATCTATCTTTACTCATTTCACACACAAAAAATGGACAAATCACCCTTTGAACTT CCT BLAST
Tissueflowers
Gene nameLI_gene_56187; 
Additional informationdetails; 

Expression of Ll_transcript_249971

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_249971

BlastpE3 ubiquitin-protein ligase SDIR1 from Arabidopsis with 59.32% of identity
BlastxE3 ubiquitin-protein ligase SDIR1 from Arabidopsis with 53.54% of identity
Eggnogzinc ion binding(ENOG41121N2)
KeggLink to kegg annotations (AT3G55530)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019447966.1)
PfamRing finger domain (PF13639.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;