| Id Trinity | FTRINITY_DN55973_c1_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_249974 |
| Sequence | TTTTCTCTCAAGCTCACATACTGATCGTCGGATAAAATTTTCAGGTACCTCCACCGACGGGTCCATCTTCTCTTCTCATCCACCTGCTCAACATTCTTTC TACTCTTCCTTCTCCTCGACGTCCAACAATCTTCTGCAACCGTTACTGTATCCTTTGTGTTCTAGTAAAAAACGACTAACATTAACACCTAAACAAATAA TACAAATGAATAATAAATGATATATAAATATTGACGCTACTAGTATATAGATATTAAACTCTTATTATTTTGTTATTAATAAGTACCATAACTCCATAAG TAATTATTTTCATAAAAAAAATTGTTTAGATAAAGTAAAAATGCATCTACAAGCAAAGAGTTTGGTAGTTGTGAAGAGTGAGATGAGTTGAGTTTAAGTG TACTATCATCACCAGAAACACAGAAAGGAACTGAACATCCTTAAAAGCACTTCAACATCTCAATCACATTCCTCTCTTTGGTCTCAAATTTTTGTAAGTG TCTCTTTTATTACTACTACTACTATTATTATTATCTGCATTCATGATTTTTGTGTAATTGGGTATGGTTACATGTTTGATCAAATTTTCTGATCACTGAT CCATGAATGCATAAGAAATACTGAATTTTTTTGTTCAATTGTATTCATTTTGAAACTTGTCATCAATTATATGCTACAAAATGTGAATCACAGAAAGTGT ATAATGTAATTGGCTTGATTTACTTAACATTCTACAAATACTAATAAATCAAAGGCACAATGGTTTTATGAAGCCAGGTAGTGTCACTGTGAATTGTTGT TGCAAGGATTTGCTTTGCAATCATGAGTTTTGTTTTCAGAGGAAGTAGAGGAGACATTGAAAGTGGATTTTCAGAATATGTTCCTGAAAGAACCACAATG CGTGTTCATTCGGCTCGGCCACATAGCAATTCCCTGGCTCTTCTTATTATAGTTTTATGTTTTTTCATGATATTGAACTCTCCTCAAGCAACACATTATT TTTTGCTATGGCTTGTGCTGGCTTTCTTTGCAATGGCAACAAGCATAAGGATGTATGCAGTGTGTCAACATCTTCAAGCTCAGGCTCGGGCTCATGCCGC AGCAGCCACTGGGTTAATTGGCCATACTGAATTACGATTTCACGTGCCACCATCATTAGCGATTGCAACTAGAGGAAGGTTGCATGGACTTAGACTTCAG CTTGCACTTGTAGACCGTGATTTTGACGAGCTCGATTATGATACTTTGAGATCTCTGGACTCTAATATTGCTTCTACTATTCCGTCAATGACCGAGGATG AGATAAATGCTTTGCCTGTTCACACATATAAAGTTGCAGATCCAACAAAGGATGTCACTGCTGGAATAGAATCTTCAAGTGCAGCTGAGATTAAACAAGA CCATGAAGGATCAGAGGAGAATTTGCATGGTCTAGAAGATGAGCTTACATGTACTATATGCTTGGACCAAGTTAACCGGGGGGAGCTTGTTCGTAGCTTG CCGTGCTTGCATCAGTTTCATGCCAACTGCATTGATCCATGGCTCAGGCAACAAGGAACATGTCCAGTGTGTAAATTCAGGATGGGGTTGTTGGCATTAC AGAGAAACATGGATAGTGAATCTGATGGTTCTGGTTCAGATATTGTGTAGCACACTTCATAGTTCAAATACAGTTGTAAAATGGTGTCACTAGTAGTTAT ACACATATGTATATCTAAATATAATAATATTATATGATGTGCTGCTACCTTGAACTTGACTTAAGCACAAGAATGTAAATTAATCTATCTTTACTCATTT CACACACAAAAAATGGACAAATCACCCTTTGAACTTCCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_56187; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_249974
| Blastp | E3 ubiquitin-protein ligase SDIR1 from Arabidopsis with 66.27% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase SDIR1 from Arabidopsis with 66.27% of identity |
| Eggnog | zinc ion binding(ENOG41121N2) |
| Kegg | Link to kegg annotations (AT3G55530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447966.1) |
| Pfam | Ring finger domain (PF13639.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |