Ll_transcript_225536

Id TrinityFTRINITY_DN56128_c0_g1_i14
Name TranscriptLl_transcript_225536
SequenceACCAATTTTTGTATGTTGTGAAGGTTTTAATGTGGAGGTTACTCCAACCTCCTCAAATAAATCAAATAAGATGTACCAGAGAATTAACTAGGTATACAGT GGACTAACCATCCTCATTCCTCATACTCAGATCCCATTTCCTCATCTTGATACTTTAAAAGGTTTCGCTTTCAACTAATGTATGATAAGGTATTGAAACT TGACTTTATTCCAATGGTTGCGCCGCCATCGTCGTTAGGATAACCACCATAAGTGGATGCTATCAAGAAGGATAACGATATATCTCTCTCATTGTTGATT ATCTCACCAAAGTGAACCTAATATACAACTTCAGTATCATAAATTATTCAACCACTTTATTTCTTTATCTCCTTCTAATAATGTTTAGGAGACACACATA ATTTCTTCAATTTTTGCAATAAATTCTTCAATTTTTTACATTGACATACACATGGAACATCATATAATAAGTTGATTTATATCATAAATTGTATATGTTG TCATCTCAGAAGTAATATTATTGTTCATTGATTCTCTCACATATTCTCCTTGTGTTGGAACAACGACTATGTCGTCTACATAGGTATACGCATAGTTGTT CTTTCTACTTTCTGTTTTATAATGATCTAGAATATTATATTACTTTTATTTTAATTAGCGTTTGTGAGTTCTGGAATAATATTGATTAGATTAGGTTCTA GTCGGTGTTTAATTTAGTGGAAATTGAGAGAACTCTGTTAATGCATATTGTTAAAGGAGCAAACATTTATATTCTTTCTACTTTTTGTTTTAGTTGTTGT TTGTGCACTTGCTGTTTGTGCTTTAAGAAATGTATAATCTTATTCATTTATATCAACAATGTATATTAACACATAATTTTTTATTCTTGAGTTGGAAGAG TAATTTATCTTGAGAAGATGATGAACTTTGGTGCTATAGACATGTTTTTTGGCCCCCTTTGCAAGGCTTCACATTTATATAGTTGTTAGTTATTTTTTTG TTCCTAATTTTGTTCTCTAGAATATGATCAACTTGGAGAAGATGCTATTTGTTCTTATACTGCATAAATTTTGTCAGGTCTTTCTTACATGGAAGAGGCA TAGTCCAGAGGTGACTTTACATGTTTTATTTAATTTCTATGGTAGTCTTTTAATTTTGTTGGTAAAGTAATTTTTGATGTTTTAATTACGAGATTTTGTT CAAGGACATCAAAGGAGCAAACATATTGATGGATCCTAATGGGATTGTGAAACTAGCATATTTTGGAATGGCAAAGCATGTTATAGATATTGGTGAAACA TTGTCGTTGTTCATGGAGCTTCAAGCACTAGGTGCTGGATGACTACAGCTCCTCTTAAGCATTTCAGAGGACTAAAATTTTCAGGCACCAATTGATTGGA GAAGACAGATTAACCAACTTTGGTTTCATGTCAGGGATGTCCAATGAATATTGAAGGGACTACTAAGGTGAATATTGAAGGGACTACTAAGGAACCCCTG CTCTCACATCTAGAGGCTTTGCCGAGGAAGATTTTAAAAAAGTAGCCGAGTTCTTTATGAGGCAGTCAAGTTAGCCTTACAGATTAAGGCAAATTCCCAA GGTGCAAACTTCAAAGATTTGGTAGCAGCTATGCATTCTGATGCACACATTCAACCCAAAATTGCTAAAGTATGCCATGAAGTAGACATATTCTTGCGGT GTTCTTAGTGAATAAGAATATTTGTTATGTATTTTGTTTTTAAAGTGTCATATGAGACTATTTTTAGTTTTTTGAGATTTCATGGTGTGGTTGGATTTAT AATGAAGGATGTAGTATAACTCTTTCAATTTTGTTACACTACCTTGGTTATTTGCAATAAAATTTTATTATTGTAAGAACATTGTATTTAATATTGTATA GTTAAA BLAST
Tissueflowers
Gene nameLI_gene_57554; 
Additional information-

Expression of Ll_transcript_225536

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_225536

Blastp-
BlastxSerine hydroxymethyltransferase 1, mitochondrial from Arabidopsis with 42.86% of identity
EggnogCatalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (By similarity)(COG0112)
KeggLink to kegg annotations (AT4G37930)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019461799.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;