Ll_transcript_225507

• Id Trinity: FTRINITY_DN56128_c0_g1_i2
• Name Transcript: Ll_transcript_225507
• Sequence: ACCAATTTTTGTATGTTGTGAAGGTTTTAATGTGGAGGTTACTCCAACCTCCTCAAATAAATCAAATAAGATGTACCAGAGAATTAACTAGGTATACAGT GGACTAACCATCCTCATTCCTCATACTCAGATCCCATTTCCTCATCTTGATACTTTAAAAGGTTTCGCTTTCAACTAATGTATGATAAGGTATTGAAACT TGACTTTATTCCAATGGTTGCGCCGCCATCGTCGTTAGGATAACCACCATAAGTGGATGCTATCAAGAAGGATAACGATATATCTCTCTCATTGTTGATT ATCTCACCAAAGTGAACCTAATATACAACTTCAGTATCATAAATTATTCAACCACTTTATTTCTTTATCTCCTTCTAATAATGTTTAGGAGACACACATA ATTTCTTCAATTTTTGCAATAAATTCTTCAATTTTTTACATTGACATACACATGGAACATCATATAATAAGTTGATTTATATCATAAATTGTATATGTTG TCATCTCAGAAGTAATATTATTGTTCATTGATTCTCTCACATATTCTCCTTGTGTTGGAACAACGACTATGTCGTCTACATAGGTATACGCATAGTTGTT CTTTCTACTTTCTGTTTTATAATGATCTAGAATATTATATTACTTTTATTTTAATTAGCGTTTGTGAGTTCTGGAATAATATTGATTAGATTAGGTTCTA GTCGGTGTTTAATTTAGTGGAAATTGAGAGAACTCTGTTAATGCATATTGTTAAAGGAGCAAACATTTATATTCTTTCTACTTTTTGTTTTAGTTGTTGT TTGTGCACTTGCTGTTTGTGCTTTAAGAAATGTATAATCTTATTCATTTATATCAACAATGTATATTAACACATAATTTTTTATTCTTGAGTTGGAAGAG TAATTTATCTTGAGAAGATGATGAACTTTGGTGCTATAGACATGTTTTTTGGCCCCCTTTGCAAGGCTTCACATTTATATAGTTGTTAGTTATTTTTTTG TTCCTAATTTTGTTCTCTAGAATATGATCAACTTGGAGAAGATGCTATTTGTTCTTATACTGCATAAATTTTGTCAGGTCTTTCTTACATGGAAGAGGCA TAGTCCAGAGGTGACTTTACATGTTTTATTTAATTTCTATGGTAGTCTTTTAATTTTGTTGGTAAAGTAATTTTTGATGTTTTAATTACGAGATTTTGTT CAAGGACATCAAAGGAGCAAACATATTGATGGATCCTAATGGGATTGTGAAACTAGCATATTTTGGAATGGCAAAGCATGTTATAGATATTGGTGAAACA TTGTCGTTGTTCATGGAGCTTCAAGCACTAGGTGCTGGATGACTACAGCTCCTCTTAAGCATTTCAGAGGACTAAAATTTTCAGGGATGTCCAATGAATA TTGAAGGGACTACTAAGGTGAATATTGAAGGGACTACTAAGGAACCCCTGCTCTCACATCTAGAGGCTTTGCCGAGGAAGATTTTAAAAAAGTAGCCGAG TTCTTTATGAGGCAGTCAAGTTAGCCTTACAGATTAAGGCAAATTCCCAAGGTGCAAACTTCAAAGATTTGGTAGCAGCTATGCATTCTGATGCACACAT TCAACCCAAAATTGCTAAAGTATGCCATGAAGTAGACATATTCTTGCGGTGTTCTTAGTGAATAAGAATATTTGTTATGTATTTTGTTTTTAAAGTGTCA TATGAGACTATTTTTAGTTTTTTGAGATTTCATGGTGTGGTTGGATTTATAATGAAGGATGTAGTATAACTCTTTCAATTTTGTTACACTACCTTGGTTA TTTGCAATAAAATTTTATTATTGTAAGAACATTGTATTTAATATTGTATAGTTAAA
• Tissue: flowers
• Gene name: LI_gene_57554;
• Additional information: -

Expression of Ll_transcript_225507

FPKM

• FPAB: 0.8
• FPNAB: 0.5
• LF1: 1.5
• LF2: 0.2
• LF3: 1.3
• LF4: 0.3
• UF1: 0.7
• UF2: 1
• UF3: 1.3
• UF4: 1.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_225507

• Blastp: -
• Blastx: Serine hydroxymethyltransferase 1, mitochondrial from Arabidopsis with 42.86% of identity
• Eggnog: Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (By similarity)(COG0112)
• Kegg: Link to kegg annotations (AT4G37930)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461799.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;