| Id Trinity | FTRINITY_DN56132_c0_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_225435 |
| Sequence | AAAGAAAATCAAAGTCAAATTAAGTATATTGAAATATATGCAAATCTAACATATCCAGAGAACATGGACTATTTTGGATTTAGATTTATTTATTCTCTTC AAAAAAGAAAGAAAGAAAAGGTTTGAATTAGGAAAATGCTGTGAACATCAAAACTTTCCTGTTAAGAAAATTACTACTATATATGGAGGGACCCACCCAC TCACCCATGTCCATGTTGATGTTGTATGGTTCTAGAAGGTACTGTTCCGTTGGTATTTAAAAGCAAGTTTAGCACAAGTAGAAAGAATGAGTGAATTAGA TGGGTACTATTAGTATTATCAAGTTTTGTCTTAACCTCTTCTTTTTCCTTCTACTTTCTCTATCCTATTCTACTTCCTCTTCCTTTGCTGAGGTTTTCTT TGAAGAGAATTTCCAAGATGGGTGGAAAAGCCGTTGGGTTTTGTCTGATTGGAAAAGGAGTGAAGGAAAAGCTGGTACCTTTAAGTACACTGCTGGAAAA TGGCCTGGAGATCCTGATGATAAAGGTATTCAGACATATAATGATGCTAAACATTATGCTATATCTGCTAAGATACCAGAGTTAAGCAATAAGAATAGAA CTCTGGTGGTTCAGTATTCTATTAAATTTGAGCAGGACATTGAATGTGGTGGTGGTTATATTAAACTCCTTTCTGGTTATGTTAATCAGAAGAAATTTGG TGGTGATACTCCTTATAGTTTGATGTTCGGACCAGACTTATGTCGCTCACAGACCAAGAAGCTACATGTTATACTATCATACCAGGGGCAGAATTACCCT ATTAGAAAGGATCTACAATGTGAAACAGACAAATTGACTCATTTCTATACATTTATTCTGAGGCCTGATGCCACTTATAGTGTCCCTGTCGATAATCGAG AAAGAGATTCTGGAAGCATGTACATAGATTGGGATATCCTTCCTCCAAAGAAAATCAAGGATGTCAATGCAAAAAAGGTCTGAGAGTTCATGTGTCAACC TGTATCTATGTCTTTTTCTTATTAGAATGATGTAATGGTGCAATCCTGCAATGTTCTTGTTTATTACTGACTGGATCCCTAAAGTCCTATGCTCTGAAAC AACTTAAACAGCATTCTATGAGATTATTTCATTGAAATACGAGAATTTTGGTTCGTTTTGCAAATCTTACATTATGTATCAGTCTACTTTTCTTGTAAAA CCTTTAACTTTCTCTATTGCAGCCAATAGACTGGGATGATAGAGAGTACATTGAAGACCCTAACGATGCCAAACCAGAGGTACTTTCTGTCCCCCGTTCC GCCCAAATCTTCCGATGTTAATGTGATTTCCCATCAAGATTGTAAGATCACAACCTTATTAGTATTTGCAGTTACATAAGAACCTTGATGATCACCTGTA GGAATTTCTATGAAAGGGTTTATTCTTCATTTCTATTTAATTACATACTCAGATGATAATTGCCTACTACAGCTAGCCGCACTATTAGAAAATGTTGGTT TTTTTGTTGATAGAGAGGCTTTTCAATTTTCAACAGAAATCTATAAAATTATAAGCATGGATAGAAGCACTTTCAATTAATTATTCTTTTATAACACATT GTTCTTCCTATGTTTATGTTTTCATTTGAGTGCTTATAACTGTCTTGATATGGCAGGGATATGATTCGATTCCGGCTGAAATTCCTGATCCAAAAGTCAA GGAGGTTTATGTGTTTACTACACATTTAGAATTTAAAAGATGTCAATAAATATGTTGTGGATAGTAAGCCACTACTTTTTATGCAAGACTTAATTTCGAT GGGGGCTTATGAATGTTCTTTTTTCTTCAAATTTTTGTTTTAGTAGCCTGTGGACTGGGATGAAGAAGAAGATGGACTTGAAAGCCCCCGAAAATTCCTA ATCCAGCATACCAAGGACCACGGAAGCGCAAGGTTCTTCAAGCTACAGATATTTGGTTTACATTATTCATATCTTGGTTTCTAATAGTTGAAAATCACTG TATCCAGAAAATCAAGAATCTCAACTACAAAGGAAAGTGGAAGATTCCATGGATCGACAACCCAGGTAGACTTATGTCGTAAGCAACCGATATCCATTTT TCTAATTTAGTTTTAATGCACTAGGGGAATTTGATCGGGCATTAGAAAAAAATATTAAGATTGATACTTCAATGGTTTTCACTAGTTATTTGGTAACAAG TATCCTACAGCCTCCTTTGCTTTCACTTGACTTTCAGTCTTGCTTGTGCAATCTAATGAATTTTAGCTCATGAGCTTTGCTTCCATTTCCCGTGTTCCGG CAGAATTTGAGGATGACCCTGATCTTTATATGCTGAAACCAATAAAGTATGTGGGCATTGAAGTGTGGCAGGTGAAAGCTGGTTCAATTTTCGACAATAT CTTAACTTGTGATAGCAAGGCAAGTTGTGGAAGAATTTTTGTCTGATAACAGAGAGGAAGCACAGAGAGCTAGAGAAGAGGGTGAAAATAGGAGGAGAGA GAGGGATCATAAATATGGAGATAGGAAGAGGGATGAACTTTGAAATGTGCAGTGTCATTGTGGGTAGTTGTCCGAAGTGTGATTTGAAGCAATGTTGAAT TGAATTGAATTGAATGCCATGTTTGAAGATATTTGAGTGTAGGACCAAAGGTGCAATTGCACTGTCCATGCCAAGCTGTATTAAACTGTATCATCTCACT AGATATGGGCACTACCCATTATGTTCATTTATTTTTCCATGGAATTAAAACTCACTACATTCAGATCCAAACATTTTCTGCCGGGGCGTTGGTTCAAGTG GTGCATGCTTGATTCTTCTTAAGCAAGGTCTCAGTTCGATTCTTGTGGATGAAAAAAATATCCGCTGGGAGAGTTAGCCCCACATATGGATGTTCCCGGC TATGACAAGATCGCCTCCAATGCGAGGACATCTGTGGGAAACAAAAAAAAACTCATGAAACTTACCTGGGGTTACTTTTGTCTCTGCATTTGTTACGAGC TTCTTGAATTCTTGATTGTTCCATTTGTTCCAGCTATTTGAATAATTAAAGTATGAACAAGTCTTTTGTGAATCAAAGTGTTCTTGTAAGTTCTTCTGCA GAACAAATACGACAGAATAAACAGGTGAACAGGAGCACATGTCTCGCTTATTGCCTTTGTTGAGGAGGCAGAGTCTTAATAATTTCCAGCGAAAGCGAAT CAGTTGTAGCTTGATCCCCAATCCTGTCCACTTCCACACATTTATATTGCCTTTATTGGGACCAAGGTCCGTTTCTCCTTCATGCGAATTGGATGTAAGG GGTTTTTGTACTGTAACTGCAACACTTGGTGCAAGCCCTCTAGACGATGCTGGTGATGATATCGTTTTACAGGATACTAAGAAAACCTATGAAAAGCCTA TTGATTTTACTCAAATTCAGATTACTCGCCTCCCCACTGTCATCATTCTAGGCCGACCTAACGTAGGCAAGTCTGCTTTGTTTAATCGTTTAATTCGGAG GAGGGAGGCTCTGGTGTATAACACCCCACAAGATCATGTCACCCGCGACATTCGAGAAGGAATTGCCAAGTTGGGTGATTTACGATTCAAAGTGTTGGAC TCTGCTGGTTTGGAAGCAGAAGCGACTTCTGGCTCTATCCTCCACCGAACAGCTTCTATGACAGCTCATGTGTTAGCAGCATCTAACTTTGCACTCTTCC TCACTGATGCAAGAGCTGGACTCCATCCTCTTGATTTGGAAGTCGGAAAATGGCTGCGCAAACATGCACCTCAAATCAAACCTATTGTCGTGATCAATAA ATCTGAATCGCTGTTTGATGCTAGCGGCTCTCTCGCGTCAGCTGCTAATGAAGTATGCCGGTTAGGATTTGGGGATCCTATTGCTATATCTGCTGAGACG GGACTTGGAATGCATGAATTATATCTGTCTCTTAGACCTGTGCTGGAGGACTATATGCTTCATGTCTTGAATAGATAATAGCTACAGTGAGGACAGTAGC TCCCCCGAGGTTGACACCAGTAAGCTCCCGATGCAGTTAGCAATTGTAGGACGACCTAATGTTGGGAAATCAACCTTACTGAATTCATTGTTAAAAGAAG ACCGTGTTCTTGTGGGTCCTGAAGCGGGTCTGACAAGAGATTCAATCAGAACCCAGTTTGAATATCAAGGAAGAACAATTTATCTGGTTGATACTGCTGG GTGGTTGCAGAGGACAAAACAGGATAAAGGTGCAGCATCCTTGAGCGTTATGCAATCAAGAAAGAGTCTACTCCGCGCTAATATAATTGCTTTGGTGCTA GATGCAGAAGAGATTGTAAATGCTAAACGAAGTATGAAACATGCTGAAGTCGTTATAGCTAGACGGGCAGTGGAAGAGGGACGTGGCCTTGTTGTGGTTG TAAACAAGATGGACCTTCTAAGGGGCAAGAATAAATCATTATCCTATGAGAAGGTTATGGAAATTGTTCCTCAAGAAATTCAGACAGTTATACCCCAGAT AACAGGAATCCCAGTGGTATTTACTTCAGCATTGGAGGGAAGGGGTCGAACTGCTGTCCTGAACCAGGTCGTTGATACATATGAAAAATGGTGTACAAGA TTACCTACTTCTCGTCTTAACCGATGGTTGAAGAAGGTTATGAGCAGGCATTCTTGGAAAGACCTGGCGGCGCAGCCGAAGATCAAGTACTTTACTCAGG TCAAGGCCCGGCCGCCGACATTTGTTGCATTTATGAGTGGAAAGACTCAGCTTTCTGATACTGACATTAGGTTCTTAACAAAATCCTTGAAGGATGATTT TGATTTGGGTGGAATTCCTATAAGGATCATGCAACGTTCTATCACTAAGAAAGAAGCAAGAAGCAGTAGTAGCAAGAGTAACCATTCGGTTTCAGCAAGT AGAGTGGCTGAAAGGGTCATGTCTGACAAGAGAAAAGTCATAGTTGAATGACAACATTATGAAGATGTAGCAGACCAGGATTTGGGAATTAGTTAGATGC TTACTGCAATTTATTTTTAAGTTTATTATCACGTCAAACGGTAAGGTTGTTTACCTTCTGATTTCGAGGTCACGAGTTCAAATCATAAAAACAATATCTT CGCTTGCAAAGATATGGTTATATATTTCTCAGACTTCATTAGATGAGAACCTCATGTATTAAACCGATCTTATGTTTGATTCGGAAATCTGAACGAATGA GTAGCACAATTACAAAATATTCAGTTGTATATAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57581; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_225435
| Blastp | GTPase Der from Magnetospirillum with 41.91% of identity |
|---|---|
| Blastx | Calreticulin-3 from Arabidopsis with 85.28% of identity |
| Eggnog | GTPase that plays an essential role in the late steps of ribosome biogenesis (By similarity)(COG1160) |
| Kegg | Link to kegg annotations (amb1344) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420019.1) |
| Pfam | Ferrous iron transport protein B (PF02421.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |