Ll_transcript_225467

• Id Trinity: FTRINITY_DN56132_c0_g1_i43
• Name Transcript: Ll_transcript_225467
• Sequence: AAAGAAAATCAAAGTCAAATTAAGTATATTGAAATATATGCAAATCTAACATATCCAGAGAACATGGACTATTTTGGATTTAGATTTATTTATTCTCTTC AAAAAAGAAAGAAAGAAAAGGTTTGAATTAGGAAAATGCTGTGAACATCAAAACTTTCCTGTTAAGAAAATTACTACTATATATGGAGGGACCCACCCAC TCACCCATGTCCATGTTGATGTTGTATGGTTCTAGAAGGTACTGTTCCGTTGGTATTTAAAAGCAAGTTTAGCACAAGTAGAAAGAATGAGTGAATTAGA TGGGTACTATTAGTATTATCAAGTTTTGTCTTAACCTCTTCTTTTTCCTTCTACTTTCTCTATCCTATTCTACTTCCTCTTCCTTTGCTGAGGTTTTCTT TGAAGAGAATTTCCAAGATGGGTGGAAAAGCCGTTGGGTTTTGTCTGATTGGAAAAGGAGTGAAGGAAAAGCTGGTACCTTTAAGTACACTGCTGGAAAA TGGCCTGGAGATCCTGATGATAAAGGTATTCAGACATATAATGATGCTAAACATTATGCTATATCTGCTAAGATACCAGAGTTAAGCAATAAGAATAGAA CTCTGGTGGTTCAGTATTCTATTAAATTTGAGCAGGACATTGAATGTGGTGGTGGTTATATTAAACTCCTTTCTGGTTATGTTAATCAGAAGAAATTTGG TGGTGATACTCCTTATAGTTTGATGTTCGGACCAGACTTATGTCGCTCACAGACCAAGAAGCTACATGTTATACTATCATACCAGGGGCAGAATTACCCT ATTAGAAAGGATCTACAATGTGAAACAGACAAATTGACTCATTTCTATACATTTATTCTGAGGCCTGATGCCACTTATAGTGTCCCTGTCGATAATCGAG AAAGAGATTCTGGAAGCATGTACATAGATTGGGATATCCTTCCTCCAAAGAAAATCAAGGATGTCAATGCAAAAAAGCCAATAGACTGGGATGATAGAGA GTACATTGAAGACCCTAACGATGCCAAACCAGAGGGATATGATTCGATTCCGGCTGAAATTCCTGATCCAAAAGTCAAGGAGGTTTATGTGTTTACTACA CATTTAGAATTTAAAAGATGTCAATAAATATGTTGTGGATAGTAAGCCACTACTTTTTATGCAAGACTTAATTTCGATGGGGGCTTATGAATGTTCTTTT TTCTTCAAATTTTTGTTTTAGTAGCCTGTGGACTGGGATGAAGAAGAAGATGGACTTGAAAGCCCCCGAAAATTCCTAATCCAGCATACCAAGGACCACG GAAGCGCAAGGTTCTTCAAGCTACAGATATTTGGTTTACATTATTCATATCTTGGTTTCTAATAGTTGAAAATCACTGTATCCAGAAAATCAAGAATCTC AACTACAAAGGAAAGTGGAAGATTCCATGGATCGACAACCCAGAATTTGAGGATGACCCTGATCTTTATATGCTGAAACCAATAAAGTATGTGGGCATTG AAGTGTGGCAGGTGAAAGCTGGTTCAATTTTCGACAATATCTTAACTTGTGATAGCAAGGCAAGTTGTGGAAGAATTTTTGTCTGATAACAGAGAGGAAG CACAGAGAGCTAGAGAAGAGGGTGAAAATAGGAGGAGAGAGAGGGATCATAAATATGGAGATAGGAAGAGGGATGAACTTTGAAATGTGCAGTGTCATTG TGGGTAGTTGTCCGAAGTGTGATTTGAAGCAATGTTGAATTGAATTGAATTGAATGCCATGTTTGAAGATATTTGAGTGTAGGACCAAAGGTGCAATTGC ACTGTCCATGCCAAGCTGTATTAAACTGTATCATCTCACTAGATATGGGCACTACCCATTATGTTCATTTATTTTTCCATGGAATTAAAACTCACTACAT TCAGATCCAAACATTTTCTGCCGGGGCGTTGGTTCAAGTGGTGCATGCTTGATTCTTCTTAAGCAAGGTCTCAGTTCGATTCTTGTGGATGAAAAAAATA TCCGCTGGGAGAGTTAGCCCCACATATGGATGTTCCCGGCTATGACAAGATCGCCTCCAATGCGAGGACATCTGTGGGAAACAAAAAAAAACTCATGAAA CTTACCTGGGGTTACTTTTGTCTCTGCATTTGTTACGAGCTTCTTGAATTCTTGATTGTTCCATTTGTTCCAGCTATTTGAATAATTAAAGTATGAACAA GTCTTTTGTGAATCAAAGTGTTCTTGTAAGTTCTTCTGCAGAACAAATACGACAGAATAAACAGGTGAACAGGAGCACATGTCTCGCTTATTGCCTTTGT TGAGGAGGCAGAGTCTTAATAATTTCCAGCGAAAGCGAATCAGTTGTAGCTTGATCCCCAATCCTGTCCACTTCCACACATTTATATTGCCTTTATTGGG ACCAAGGTCCGTTTCTCCTTCATGCGAATTGGATGTAAGGGGTTTTTGTACTGTAACTGCAACACTTGGTGCAAGCCCTCTAGACGATGCTGGTGATGAT ATCGTTTTACAGGATACTAAGAAAACCTATGAAAAGCCTATTGATTTTACTCAAATTCAGATTACTCGCCTCCCCACTGTCATCATTCTAGGCCGACCTA ACGTAGGCAAGTCTGCTTTGTTTAATCGTTTAATTCGGAGGAGGGAGGCTCTGGTGTATAACACCCCACAAGATCATGTCACCCGCGACATTCGAGAAGG AATTGCCAAGTTGGGTGATTTACGATTCAAAGTGTTGGACTCTGCTGGTTTGGAAGCAGAAGCGACTTCTGGCTCTATCCTCCACCGAACAGCTTCTATG ACAGCTCATGTGTTAGCAGCATCTAACTTTGCACTCTTCCTCACTGATGCAAGAGCTGGACTCCATCCTCTTGATTTGGAAGTCGGAAAATGGCTGCGCA AACATGCACCTCAAATCAAACCTATTGTCGTGATCAATAAATCTGAATCGCTGTTTGATGCTAGCGGCTCTCTCGCGTCAGCTGCTAATGAAGTATGCCG GTTAGGATTTGGGGATCCTATTGCTATATCTGCTGAGACGGGACTTGGAATGCATGAATTATATCTGTCTCTTAGACCTGTGCTGGAGGACTATATGCTT CATGTCTTGAATAATGAAGTTGCTCAGGATAATAGCTACAGTGAGGACAGTAGCTCCCCCGAGGTTGACACCAGTAAGCTCCCGATGCAGTTAGCAATTG TAGGACGACCTAATGTTGGGAAATCAACCTTACTGAATTCATTGTTAAAAGAAGACCGTGTTCTTGTGGGTCCTGAAGCGGGTCTGACAAGAGATTCAAT CAGAACCCAGTTTGAATATCAAGGAAGAACAATTTATCTGGTTGATACTGCTGGGTGGTTGCAGAGGACAAAACAGGATAAAGGTGCAGCATCCTTGAGC GTTATGCAATCAAGAAAGAGTCTACTCCGCGCTAATATAATTGCTTTGGTGCTAGATGCAGAAGAGATTGTAAATGCTAAACGAAGTATGAAACATGCTG AAGTCGTTATAGCTAGACGGGCAGTGGAAGAGGGACGTGGCCTTGTTGTGGTTGTAAACAAGATGGACCTTCTAAGGGGCAAGAATAAATCATTATCCTA TGAGAAGGTTATGGAAATTGTTCCTCAAGAAATTCAGACAGTTATACCCCAGATAACAGGAATCCCAGTGGTATTTACTTCAGCATTGGAGGGAAGGGGT CGAACTGCTGTCCTGAACCAGGTCGTTGATACATATGAAAAATGGTGTACAAGATTACCTACTTCTCGTCTTAACCGATGGTTGAAGAAGGTTATGAGCA GGCATTCTTGGAAAGACCTGGCGGCGCAGCCGAAGATCAAGTACTTTACTCAGGTCAAGGCCCGGCCGCCGACATTTGTTGCATTTATGAGTGGAAAGAC TCAGCTTTCTGATACTGACATTAGGTTCTTAACAAAATCCTTGAAGGATGATTTTGATTTGGGTGGAATTCCTATAAGGATCATGCAACGTTCTATCACT AAGAAAGAAGCAAGAAGCAGTAGTAGCAAGAGTAACCATTCGGTTTCAGCAAGTAGAGTGGCTGAAAGGGTCATGTCTGACAAGAGAAAAGTCATAGTTG AATGACAACATTATGAAGATGTAGCAGACCAGGATTTGGGAATTAGTTAGATGCTTACTGCAATTTATTTTTAAGTTTATTATCACGTCAAACGGTAAGG TTGTTTACCTTCTGATTTCGAGGTCACGAGTTCAAATCATAAAAACAATATCTTCGCTTGCAAAGATATGGTTATATATTTCTCAGACTTCATTAGATGA GAACCTCATGTATTAAACCGATCTTATGTTTGATTCGGAAATCTGAACGAATGAGTAGCACAATTACAAAATATTCAGTTGTATATAT
• Tissue: flowers
• Gene name: LI_gene_57581;
• Additional information: details;

Expression of Ll_transcript_225467

FPKM

• FPAB: 0.6
• FPNAB: 1.5
• LF1: 0.6
• LF2: 0
• LF3: 0.3
• LF4: 0.5
• UF1: 0.1
• UF2: 0.2
• UF3: 0
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_225467

• Blastp: GTPase Der from Parvibaculum with 39.54% of identity
• Blastx: Calreticulin-3 from Arabidopsis with 84.48% of identity
• Eggnog: GTPase that plays an essential role in the late steps of ribosome biogenesis (By similarity)(COG1160)
• Kegg: Link to kegg annotations (Plav_3492)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420018.1)
• Pfam: 50S ribosome-binding GTPase (PF01926.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;