| Id Trinity | FTRINITY_DN56144_c1_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_225923 |
| Sequence | GTACATTTGAGAGGCCTTAGACTTAGTTGACTTATATATGCCACTGATTTTGAGTTTATGTCTTATCTCTTTAATTTTATGCATTTTTCTGTCTTTTAGC ATTTATATGTATTACTATAATTTGCTTCCTAAACATCTCTATCCCGGCCATCCTGCTATTCCATTTTTTGAAGTGGACGAGGGTGCTCTGGGGTTGACTA CTTTGGCTTTAACAAATAGACAAATGATGATTGATTTGTGAGGAAACAATTGGGTAACTCACCTGTGGATGTTCATCTATAACTTTTTTAATGCGAGTTT AAATTATGACAATCTGTTAAGTTTAAACATGGTTGTAATCTCAATTTGTTTAATGTGAGTTTGAATGATGACGATCTGTTAACTTTCAACATGGTTGTAA TCTCAAATTGTTTAATGTGACTTTGAACGATAACAATTTGTTAAGTTTAAACATGGTTGTGTATCTCAATTTGTTTAATGTTACTTTGAACGGTGGTAAT TTGTTAAGTTTAAACATGGCTGTATATCTGAAGTTGTTTAATGGTAGTTTGAACGATGATAATTTGTTAAGTTTAAACATGGTTTTATATCTCAATTTGT TTACTAGACGTCTCTTTCTTATCATAGTTAATGCACAGGTGCATGTACACCATTCCTTATTTATCAAATGCATTGCTAATTGTGTTTGTCTGTTAGATTC AATGTACTGTTGGTTGCATGGCCTCTTATTTATCTAGGTTTCTGTTTATTTATTTATTTTAAAGTAACACTTCATTGTGAATCTTCTCTATTTTGTTAGG ATGCCCATGAATTCTTGAACTTTTTGTTAAATGAAATTGTCGACATTCTGGAGAAAGAGGACCAGGCTGCAAAAAATGATGAAGAGACATCACCACCTTC TGAAAAAACTGCAAACGGTCCTAAGAATGGTCTATCTAATGGTGCTAAAAAGGAGCCTTTAGTTACTTGGGTGCACAAAAATTTTCAGGGAATACTCACC AACGAAACAAGGTGCTTGCAATGTGAAACTGTGACAGCTAGGGATGAAACATTTTTTGACTTGAGCCTTGATATTGAACAAAACAGTTCAATTACAAGTT GTTTGAAAAACTTCAGTTCGACTGAGACGTTGAATGCTGAAGACAAATTTTTTTGTGACAAGTGCTGCAGTTTGCAAGAAGCTCAGAAGAGGATGAAGAT AAAGAAACCGCCTCACATCTTGGTCATCCATCTTAAGCGGTTTAAGTACATTGAGCAGCTAGGCCGCTACAAGAAGCTGTCTTATCGGGTTGTCTTCCCT CTAGAGCTAAAGTTGAGTGACACTGTTGAAGAAGCAGACATCGAGTATTCTCTATTTGCAGTAGTCGTCCATGTTGGGAGTGGACCCAACCACGGACATT ATGTCAGCCTCGTGAAAAGCCATAACCACTGGCTATTTTTTGATGACGAAAATGTCGAGATGATCGACGAGTCCGCTGTTCAGACATTCTTCGGGTCATC ACAAGAATATTCCAGTAACACAGACCATGGTTACATTTTGTTCTATGAGAGCATTGCCAACAGGAACTAGAGGAAGGAACCACCTTACCAGATTTTCTAG GTACTTGAATCATTTGAACTTAATCTGTTTTCGGTTTATTATTAATTATTTTTCTCTTAACTTTTACCGTTTGAGTTGTTATACATCCTTGAGAGGATAG ATGTTGTGAAAATGTATACCTAGGTGGTTGGCATGTACAGTGGATAGTGGAAAAACTGTCCTTACCCCTCTCCCTATTTCCATAATAAGAACAGACAGAT AGAGCAGTGAGTATATATATGTTCTCAGATTTTCTCTGACAATGTATTCAGTCACAAATGTTCAATCAACATTAGAACTTAACAACATTCTATGTTTTCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57688; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_225923
| Blastp | Ubiquitin carboxyl-terminal hydrolase 3 from Arabidopsis with 94.31% of identity |
|---|---|
| Blastx | Ubiquitin carboxyl-terminal hydrolase 4 from Arabidopsis with 86.33% of identity |
| Eggnog | ubiquitin carboxyl-terminal hydrolase(ENOG410XQ81) |
| Kegg | Link to kegg annotations (AT4G39910) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416530.1) |
| Pfam | Ubiquitin carboxyl-terminal hydrolase (PF00443.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |