Ll_transcript_226174

• Id Trinity: FTRINITY_DN56151_c0_g3_i4
• Name Transcript: Ll_transcript_226174
• Sequence: CTCAAAGGCATCGCAGAATTATTGAGACCGTAAATCCCAATTTAGTGAAAGCAAAGAATGTGAAGGCAAAAGATATTGATCTAAATGGAGAGGAAAACAT AACCCTCTAGGTGAGAAAGGATTAGAGAAACAAAAGGCTCATGAACGATATCTGAGGCTGCAGGAGCAAGGGAAAACTGAACAAGCAAAAAAAGATTTAG ATCAGAAAAGAAAGAAGCGTGTGGCACTGCAATGGCGAGAAAAGCGGTTTTAATCGGATGCAACTATCCAGGAACAAAGGCAGAATTGAGAGGATGCATA AACGACGTTTGGAAAATGCACAGCTCTCTCATCAACAGATTCGGTTTTTCTGAAGACGACATCGTCGTTTTGATCGACACCGACGACTCTTACACTCAGC CTACCGGGAAGAACATCCGTTCTGCGTTGCAAAGGCTGATCCGATCATCGGAGGAAGGTGACGTGCTTTTCGTGCATTACAGCGGACACGGCACGCGCCT CCCTGCGGAAACCGGCGAGGATGATGATACTGGTTATGATGAATGCATTGTTCCTTCTGATATGAATCTCATCACTGGTTTGTTCAATTCCAGAATCAAC CTATTTTAGTAGCATATTTTATTTTTATCTTAATTGCAATATTTGTTGACTTTGTTTGATCTGTATTGTTTTATGATTATGATTCAAACCAATTGCTTAT TTATTGGATAAAGTTCAAATCGTTTTCTGCACATATCTACCATGGCATGATTTTGTCTTTTAATTTTTAGATTTGCGATATAGATTATTTTAGAGTGTAA TATCTATGAATGCATTGTTCCTTCTGATATGAATCTCATCACTGGTTTGTTCAATTTCAGATTCAACACATTTTATTTTTTATGTTAATTGTAATGTTAA TTGACTTTGTTTGATCTGTAATATTTTATGAATATGATTGAAACTAATTGCTTATTTATTGGATAAAGTTTTCTGCACATATCTACCATGGCATGATTTT GTCTTTTAGAGTGTAGTATCTATGCGGCATAAAGATTTATATATAGTCACTATTCATTTGGATTTCTTTTGAAAAGTCAATGATAATTACATATAAATGA TGATTGATATAATAACAATATAGTCAGTGCATACATTTTTTCTCTCGTTATTTTATTATACGATTTTGGTAAAGAGCTATTGAAGATGATTCTTGTGGAA AGTGATGAGGCATTTATTTTTGTGCAAACAGATGATGATTTCAAGGAATTTGTAGATGGGATCCCTAGAGGTGTTAGGCTTACAATTGTATCAGATTCTT GTCATAGTGGTGGTTTAATTGAAGAAGCTAAGGAACAGATCGGAGAGAGTACAAAGGGAGAAGACCAAGATTCTGGCTCTGGTTCTGGCTTTGGATTGTC AAACTTTCTGCATCGAAAAGTGGAGGATGCTTTCGAGTCTCGTGGTATTCATGTCCCTTCAGCATTGCGGCACCATGGACATGGGAATGATGGAGATGAA GATGGGGATGCTGAACTCCCACATGGGCGATACGGCTATGTAAAGAACAAATCTCTGCCACTTTCAACCCTGATTGATATTCTCAAGCAGAAAACTGGGA AAGATGATATAGATGTTGGGAAACTGAGGCCTACGCTTTTTGATGTTTTTGGGGATGATGCTAGCCCTAAGGTAAAGAAGTTCATGAAGGTGATCCTGGA CAAACTCCAACATGGAGATGGTGAAAGTGGAGAACAGGGTGGAATCTTGGGGTTTGTGGGTAGTCTTGCCCAAGAGTTTCTGAAGCAAAAGCTGGATGAG AATGATGAGGGATATGCAAAACCTGCTTTAGAGACACATGTGGAGAGTAAGCATGAGGCGTATGCTGGATCAAACAAACGTGGCCTCCCAGAAGGTGGAA TTCTGCTGAGTGGTTGTCAAACTGATCAGACTTCAGCAGATGCAAGCCCTGCAGGAAATGCTGCCAGTGCTTATGGTGCTTTCAGCAATGCAATTCAGAC TATACTTGAGGAATCTGATGGTGCAATCACGAATCATGAGCTTGTTCTGAAGGCTCGAGAGAAGCTGAAGAGGGCGGGTTTTACTCAGCAACCTGGACTC TATTGTAGTGACCATTATGTTGACGCTCCTTTCGTGGCTTGATGTCTCTTCTTATGCAGACAAGGTGAATCATGTGTCTTGTTTTCTTGTATGCTTATGT ATCACTGTGTGTTTGAGGTGTGTGTTGTGAGAAATGATGTGGAACAACAAGAAATGTTTACTTCAAATATAATTTTTCAATAATCATTTATGATATGTTC AGACTGGACTACATGTAATACAACCTAGCCATCTACTATGTTACACTTTCTCAATCATCTTTAAAATATACAAAATGGAATTATATGCCAAAATGGG
• Tissue: flowers
• Gene name: LI_gene_57748;
• Additional information: details;

Expression of Ll_transcript_226174

FPKM

• FPAB: 0
• FPNAB: 2.5
• LF1: 10.8
• LF2: 15.7
• LF3: 0
• LF4: 1
• UF1: 10.2
• UF2: 8.7
• UF3: 1.7
• UF4: 1.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_226174

• Blastp: Metacaspase-5 from Arabidopsis with 60% of identity
• Blastx: Metacaspase-4 from Arabidopsis with 58.06% of identity
• Eggnog: Metacaspase(ENOG410Y41C)
• Kegg: Link to kegg annotations (AT1G79330)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449305.1)
• Pfam: Caspase domain (PF00656.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;