| Id Trinity | FTRINITY_DN56163_c1_g4_i3 |
|---|---|
| Name Transcript | Ll_transcript_226358 |
| Sequence | AAAAAGACCAAGACTTTTGAGTGCTACAATTTTTGTTTATTATTATTATTATTATTATTTTTATTTTCTCTATTATTATATAGTTGCTGTTACTATTATT AATTAATTTGTGGTGAGTGAGCGAGAGAGAGAGATTGGCGCTTTAAATTTTCTCTCAGATTCTGAATACCTAAAATCTAGGGTTTTATTGTTCTTCCCGG GTAAGTGAGTAATTTGATTTTCCTTTTATTAGTTTAAAAAAAATGATTTTGGGATTAAGTTCGTTTGCGTGATTCGTTTCTCTCTGATGCTCTTTTGAAA TTAGGGTTTTTGTTATTGCTCTTGAGGTGAGAATCATGAGTTTTTTAAATCATCTGGGTCGAATAATTCTGTCTCTGCATGGCTTTTGGCCTTTTTCTGA GGAAATTAAACCCTAATTTTTTTGTGGTTGGAATTTCTTCGTGAGCTGGGGTTGCTTTTGGATTTAGCTCACAAATTTGGTGTTTGGTTTTCTGGTCGAT AGTTATATTGCATGCTGGCTTGGTATTTCCTATGACTCTGTTTGGTTCTCTGAGTAATAAATATTGTTTTGAAAAAATATTAGGATTTGTTCTAGATTTT GTTTCTGTGGTTTTTTATTTAGCTATAGATATAGCTAATAATTGAAAGTTGTTCCCTTTCAAGAGTTGCAAGCAGTCTAGTATAAGGTAAAGTTTGTAAA TAAACACCAGTTTTGTAAATTTTGGCTGTGACTAAGAAGTGTTCAGTTTCATTTTATGACGAATCATAATTAATTTCACTGAGGGTGTATTAATTTTCTT ACATTGTGCATTTTTTAAAATTATTGTAAATTTATTATCCTTTTAATGTGTTTCTTGTTTTTTTTAGACATTTGTATCGATCAGCTTTGTTTAAGCAGAA TGAATAATGAATGAAAGTTTTTCTAGGGATCTAAAGATATGCAGTCCAAGTCTGAAACAAATCCAACGAGGTCGGATCCACATTCCTTTCAACCTAACAA TGTTTATGCTGAACCGTGGTGGCGTGGTATTGGGTACAATCCCATTGCCCAAACAATATCTGGGGCAAATGCAACCAAGTCATCCTCTCTTGATTGCCCT AATGGTGATTCAGAATCCAATGAAGGCCAGTCTTTGTCCAATAGTGGTTTGAATGAGGAAGATGATTCTGCTGCTAAAGATTCCCAACTTGCGGCTCCTA ATCAAACAGGTGGTTTAGAGTATAGTGTAACTATTTTAAACAGTAAAATAAAAGGGAAGATAAACAGATGAATTGGCTCTTCAAATTATATTTTTTTGGT AGTTTTTTCATTTGTTCAAATATCATAAGTTATAGAGATGTTGAAGTACACTATTCTTTCTTTTTTTGTAGAAAATTTTGGACATGAACAACAAGGGATG CAGCAAACTTCAGCACCTGCACCTTCTGTGCGTGAAGATGCCCATACCCAGACTCCGCAGCTGGAACTTGTTGGTCATTCAATTGCTTGTGCCACAAATC CTTATCAAGATCCATACTTTGGGGGCATGATGACAGCTTATGGACACCAGCAGTTGGGATATGCTCCTTTTATGGGAATTCCACATGCAAGAATGCCTTT GCCTCTTGAGATGGCACAAGAGCCTGTTTATGTGAATGCTAAACAATACCAGGGAATTCTGAGGCGAAGACAGGCTCGTGCTAAGGCAGAACTTGAACGG AAGCTTATAAAAGCCAGAAAGGTACAAATCCACTAGACCTATGCATGTTTATGTATATTTCTATTTTTTTACTATCGCAGTTGGGTGCTTCTTTATTAAT TGGGCAGGTGATATCTAACCACTTTTAGGTGTGAGACGTTTGTTCTGCTCTGTTGCCTATTACTAAACTTAACCTTATGACTCTCATATGAGCTAAAAGC TTTTGTTTTGTATGAATCTTCTCCCAAAATAAACTAGCAGAGCATATTTGCCTTCTTTTGGTGTGCTATAAAATAAGTGGTTGGGAAATACAAGCAGTAT AAGAGTAATTTTTCCTTTCCTTTGAGAGTGAATGAGAGATAGCCTTATTTGTCCAGGCAGTCTTCTCTACCTTCTTTACATTATGTCATCTGATAGTTGC TTAGTCTTAGTCCGGAAACCATTTTTAAAATATAGCAGTGGGCATGTGAAAAGGAAAAGTTTGTGAAAAATTGTTCTGTATTGCCTATTAAGAGAAAACA AGAGATTTGCTGACCTTGTAAGGACTCATGAACATATCCTTTCATATTTTGAGCCTTTGCCGCCTTTGCAGTAAGGTCTGCTACATCCATGACTTGCTGA TTTAATGATGGAAAAAATGAGTCCACCTTTATTGCATTGGAATTGTTGATGGACCTTCATGAAATGATATCACCCTATTGCTTAAAATCATATAAATTAA ATATCAATTTACTATAAATAAATCAAAAATCCTAGTCGGGTCCTAATATCTATTTAAATTCACACTGAATAGCGCAACAGGTTTGATTTCTATGTTAAAC AGATTTATGATTGGGATTTGTCTTGTGCTTAAACTGCAACTCTAGGGGATTTTTAACATGCTTAGTAGGAATCGTTTTGCAATGAGATAAGTAAAAATGG GAAGCTCCATATGGTGAATGCAGAAGCATGTTAACTAGAATACTTTTGAGTTTGTAGTGAAACCTCAGTGAGGAAAAACTTCTAATTTAGTTTTGAAAGA TTGCTATTGGAGACTGAACAAAGTCAGCCTTGTCTGTAAGAATTAGGTTCTAGAAAAATAAGCATGCAGATGTAGACGGTGGAAAATGGAAGTCATACAA GTTCACAAAGGTCAAGAAACTTATGACCTTTTAGCTTCTATAATAATTTTGATACATTAATTTATGATTCCACTCTGATTTTGCGTCTGTATGCAATCAC CTTTTAGAGCCATTTCATTAAAAATCATGAAAACAAAAGGGTTAAGGAGCTTATTTTCTCAATGTTTTGAATGAAAAAGAATCTGATGCTATTAGTATTG CTGTCATGACTAATGTTAACTGTTTTTTTCATTCAATTCTCGTGTCCTCCTCTGGGCTTATGATAACATCTGTTTTGCACAGCCATATTTGCATGAATCT CGTCATCAGCATGCTATGAGAAGGGCAAGGGGTAGCGGAGGACGATTTGCAAAGAAATCTGATGCTGAGGCCTCCGGCAAGGAAAAGGATGCGGGTTCTG GTCCAGTCCTGTCATCACAATCAATCAGTTCATCTGGTTCTGAACCTTTACCTTCTGATTCTGCCGAAACCTGGAATTCTCCAAATATGCTGCAACAAGA TGCAAGAGGATCAAAAGCGCAAAGCAGGCTGGAAACACCCAATTATGAAAATGGCAGTGGTTCCTACCATAATCCTAATGGCATGCAATCTTCAACTTAT CATATGCACTCAGGTGAGAGAGGGGAGGAAGGCGACTGCTCCGGTCAGCAAAGGGGAACCATATCTTCCGAGCACGCCTCGCAGAGGCGTCTTGCTATAC AGTAAAACCCCCCGGCATGGGGGATAGAGTTGCCAAGGTTGGTTTGTATCCTAGTGATATATTCTGTGAATACCTTGGTTATCTGTCAACATTCTTGGCA AAATATATATGCCAAGCGGCAAATCATTCTTGGCTTTGTTCTTGTGTTTATGGTGTGAAAGGTATGATGGGGGAAAGAATGATGAATGAGATATGATTTC CTTTGAAGTTAAATCAATCTTTCATTCTTATCTCATTTTTGCATTTTGTACAGAACTATAGTGGTTAGTGAACTCAATCCCAGATGCATGGTCAGATCAG AGATTTCAGAAGACTTTTGGAGAAATAAACTCTTGATGTACCAATTCTAGTTTCATGGGTTTTGTCTTATGTAACTCTTACCAGTTCATTTTTAACATTA GACATCATAGGGGAATGACATGAATTTAGTTACATTATATTAGTTTGCCTTGTGATTTAATTTTAGCATTCTAAATTTGGAGCCACATTTCTATCCCAAA CTTTGTACCACTTCATATATTCAATGTTTCTCATTGGTTAGAAAAGTAAAACATGTATTAAATATATATTAATTTTACATTTTCTAACCAATCAGAAATA GGGGGTATAAGATGATATACATTTTGGGATAGAAAATATACTCCCTCTACATTTCCATATTTTCACTAGCTAAACGGAAGATAAATAAGAAAACCATATT TTCTCTTTTCTCCACGACCCTTTATCCTTTGGGGAGAATATCTGCTGTCTCATTTTTTGTACCACTACATGTAACATCACTTCTAATTGGATGAAATTTT TTTATCTTATCCTTGCCTTGTAAGTGGTCACGAGACGCCAAATTGTTCATACCCAAATGCGATTCAATTGTAGTAAAATGAAATATCGATTCTTCACCAT ATCATTGCATTTATTGTCTTAAACATTCTCATCACATCATAAAAGCATTTCATACATCTTCTCATCGTCTTCATGCATTCAAATTCAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57861; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_226358
| Blastp | Nuclear transcription factor Y subunit A-1 from Arabidopsis with 60.94% of identity |
|---|---|
| Blastx | Nuclear transcription factor Y subunit A-1 from Arabidopsis with 43.17% of identity |
| Eggnog | Nuclear transcription factor Y(COG5224) |
| Kegg | Link to kegg annotations (AT5G12840) |
| CantataDB | Link to cantataDB annotations (CNT0002912) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003551355.1) |
| Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B (PF02045.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |