| Id Trinity | FTRINITY_DN56175_c2_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_227079 |
| Sequence | ACAGTGTTGAGAAGCCTATGGAGATTGATCATCATTTGTATGAATTTGGATCAGTACAGTATCATATTCAGTCACAAGCCTCCAATCCACTGGTAGCTTA CTTGTCAATATCAACACCATCTCTTTGCCATGGAGTCCTACAAAATGAACTATCTTCTTACACAATTGAAACGGTAAAGAGACTATGTCCTGAAATTGTG GAGATTGTTGAACCTGCCAGAGAAGGATATCAACTTACTCTTAGGCTTAATCTCAATCAAATTCCACGAGGCAAAGATTATGTCAAAGTCATTCGAGATA TTTCCACGGTTCAATCAGTAATTCTTAGTTCACAGCTGAAAGAAATATTATGGAATGTCAAGTCAAATGTTACGATGCAGGGGATGTACAAGCCCATCAA ACTAGTCTACCATGCAAGAGAACCTTTCTTTATCATCATCGAGCCACAAAGAATCATAGCAGTATTCCCAATTCGTTTCAAAGAAAAGTCAGAGTTGATT ATTGCAACAACTTTCTTTCAGGAGCTAATGGATGTTGGAAGTTCAGATAAATGGGCCAAGGCACCATCTTGTAACTGGTCAGCCATTCCTCCGCCAGAGT TAAGAGGAGAAACTTTGGAGGATTTGAGTACCAATGGAGGGTTTGTCACTTTTGATATCTCTTCTCGCCATATTGAAGGCAAAAGGCTAGACAAGACTGT CTGGAATCTATTAAATTTCAATGCCTATGTTAGATACCATGTAAAGGTAATATATATGGATATTAATATTGCTTCTTGACAGGACTTACAATAATAACAA AAAATCCGTTCACAATGAAATAAGTACATTCTTTGTCCAAGTTCATTGCTGGAGATGAGTCGTTCCTGTTCATATTTTACAACAGTAAGCTAAATGAGCA ACATTCTTAAAATAGTGATTCAACTTTAAAAAATAGAAAAAAATTGTTAGATGAAAAATCAATAATAAACAAAATAAAGTAAAAGAGAATAACTAAAATA GAGTTGCATCATTAGAAATGATTTTGGTTTGAGTTGCAACGAAAGGAGTTGCAGTGGATGCTCTAAGAACTAATTCTAATTGTAAATCACTATTTATGAC ACCTTTAACTGACATCTACAGAGCACTGAAGGCTTTATTCAAAGAAAGAGTTTGGAAAATTTGGTAGAGGTACAGAAACAGCTTAAAGTGTAACATTAAA TTCATTGTTAGGACAAAAATTCTGGTTTAGGCAGCACCAAGATTTGAGCAGAACTGTGGGATCTAGAAGATAATGCTTTCCTACACTATTTTTCAAGGGC ATAACTATAAATTACTCACTTTCAATCACTTGATTGTAAACAATAAAGAGAATAATCATTTTTCTTGAATAATAATAGCTATAATAATAATAATCATGTT TAGCAATGTATAGATCAACAGGACCACTGTGCTAAATGTATCGAATAATAATAGCTATAATAATGAAGTTTAATATTGAAATATTCCACAAAAGATGTGG AAATCACTCAACAAGGATTCCATCAAACTTAGATTTCAGTATTCAAACAGAAAAGTCTAGGATTGAAGAGTTCTACTGAACACTTTTCTATACTAATTGC TTAATATAACTTGACTAGAAGAAAGCAAGGGAACTACCCTAGCTTCTTGAAAACTCTTAGTTCCTCAATAAGTTTCTTTATCGGGTTTCAACTTTTATCT GTACCTAGAATTTTGATGCATCTAAAAACCTAAAGCAGGCAAAAAGTTTCTTCATTTCTCATGTGTTTACCTGGGACAGCAGCAGCAACATTAATATTTC CCCCTTAGAAAATCCAGTAGAGTCCTCGGTTCCGAGAATCGAATACTCAAAGTACTGTACCTGTTGTGCTGCTAATTGCTATCTTAAGATTGCTAATGAT GTTTTTATCATTCTACTATACCAGAACACTTGTCTTATCAGCTCATGAATTTTATTAATTCTGAGGATGCATCATCCACTCATAAAAACTAGTAACCGAA ACAGAATCGAACAGTTAAGTACAGAAGAAGCCAAAACACTGAGGAAAAGCAAAAGGGGGCACCAAACTATAATTACATGGTTATGATCAATTCTACACAT TACTTGATAGGATTTGATGGAAGGTATATCAAGAAGGAAGAGGAGTGTAGCACAGGATCCTAACTATATAAATAAGGATTAGTGAGAGTAAGTTGGTTCT TGGAAAAGAAGTTAATTGGTTGATACTGGGATAGAGGAAGTTCTCTCGAATATACCTCTAGGTATTCATTGTTTTTTTCTGTTCTTCTACCTAGTTCAGC ATCATTATTACTTTGATAATGATTTAGGAGCATAGGGTTAATCAATATAATCTAGATTTCCTTTCAATTCCTAAATCACTTTGATAATAATATTGAGAAA CCGACTTTAAAGGCCATTACGAATTTCTTTCATGTCATTTGGATTAATAAATGTACCATCAACATTTCAAGCACTCGTGAATGAAGTCGTCAAACCTTTT CTTCTAACATGTGTGGTTGCCTTTTTTGATGATATACCAATCCATGGAGCTACTCTTACAGCATTCACGGCCAGTTCTTCAAGTACTACAGGATAACTAA ACCAACTGAAAGTGAACAAAAAGAAGTGTACTTTTGGTCAAAACAGTTTGTAATACTTCGGTCACATACTGGATAAGGGAGTTTCAGCCGATCCTAAGAA GATTGAAGCAATGTGGTTGTGGCCTCCTCGTAAAGGCATCAAAGGGCCGAGGAAGTTTTTGGGATTGACAGATATTATAGAAGGTTTGTGCAAGGGTATG GAAAAATTGCAAAACGTTTGACCCAATTGTTAACGAAGGATAGCTTAAAGTGAAGTGCGGAAGCACAATTGGATTTTGAGGAGCTTAAAGGTGCTTTCAC TGAACCTCCAATTGTAGCAGTTCCTGATTTTACTAATCCTTTTAGGGTGGAAGATGCTTCAAGTAAAGAGTTAAGAGCTGTCCCTTTCGAAGAAGGAAAA CCTCTCGCTTTTTGGAGCCATGCTTTATCGGAGAGAGGTCAACATAACTCAGTTTATGAGAGAGAGCATATAACAGTGGTCCAAGCCCAAAGGTCGAGAC ATTATTTGAACGAAAACCATTTTATCATCCTCACTGATAAAAAAAAGTATGAATTTTTAACAGAACAGATTGGCAGAGTATCAACATAAATGGGCTTCAA AATTGATTGTTTATGATTTTGAGATACAATACCGACCAGGTAAGGAGAATATTGAAGTCTGCAGAAGATGCCTTTTCCAAAAGAACAATGTTTTCAGCAA TGACAGTGTTACAATTTGGTAAATAGTGTGAAGGTTCCATCTCAACCAATTGGCAATGAGAGAAAAAGACCAACAAGTATTTAAACAATGCCTAGGAGAA TGAAGCAGACAATGGGGACTTGCTTCCCGACATGCTCCCTTCATAGAATGAAATCCTTAGCTAAGGGACCTAATGCTAGGTTGAGTCTGCAGTATTTAAG CCCCTAGCAGATATTGCAGAGGATAGATCAGGGCGCTTCCAAATTGCAATTACCTGATAGTAATGTATATGTCCTGTCTTCCATGTTTCAATACTCAAGA AAGTTATTCACCCTACTGCAATTCCACAACCTTTACCATCAATGTTTTCGGATGAACATGTGCCGGAAGTAGTTCCAGAACAACTGTTGAATATAAGACA GACCTTACAGGGTGAGTTAGAAGTGTTGATCAGGTTGCAGCAGCTCCCTGACCATGAGAATAGGTGGGAACTGGCTAAGAGCATACATGACATATTTCCT ACTCATCACCATGAGGACAAGGTGGCTCTTTTACGGGAGAATACTGATAGGATGTGTGGGGAGATATATTAGAGAAGGAAGATGACAGTAGCACAGGATC CTAACTCTATAAATAAAAATTAATAAGAGTTAGTTGGTTGGGATTGGGAGAGAGGAGGTTCTCTCGAATAAATCTCCAGGTATTCATTGTATTTTTCTGT TCTTATACCTACTTATGCATCATGATTTAGGAACTTAGGGTTCATCAATATAAATCTAGTTTTCCTTTCTACTCCTATACTAATTTACCAGTTTCTATCA CTACTTCAGAATACAATGCTCGCTGCTCAAGAAACAGAATAAGGAACAGTAATTTTTGTTACCTTCTTTCCCTCGTATTCAATTTTAAGTTACAACATCT AACAAAGAAACTGATATAAGCATATGTATCAACACTCCATGCTGACCTTTTCTTAATCAGTCTCCAGAAATAGATTAAAAAGCACGTAAAAGATCAAACT TAACTCTCTTATAAGGACTAAAAATCTAAAAACTGACATTGTTATGTTTATATTGACGCACAATAACTAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57968; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_227079
| Blastp | Actin-related protein 2/3 complex subunit 2B from Arabidopsis with 52.8% of identity |
|---|---|
| Blastx | Actin-related protein 2/3 complex subunit 2B from Arabidopsis with 53.01% of identity |
| Eggnog | protein 2 3 complex subunit(ENOG410YKF6) |
| Kegg | Link to kegg annotations (AT2G33385) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429504.1) |
| Pfam | Arp2/3 complex, 34 kD subunit p34-Arc (PF04045.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |