Id Trinity | FTRINITY_DN56204_c0_g1_i2 |
---|---|
Name Transcript | Ll_transcript_61261 |
Sequence | TTATGCTATATGCTACATTGGTTATGCTTTATGCATACTCACACTGAATCACTCTCCCTTATTGGCAACTCAATAGTCAACACTCCCTCACCCTCATTCA CTTCAACTCTTCAAAACAACACAATCAATTTCACTCTCATTTTCTTCCATTTTTCTCTTCCCATTCTCATTCCCCCTTTTCTCATTTCCTCCAATGGACT CATCGGTTAACGTTCACATTAAACGCCCTGCTTCCACCGTGTTCTCTTCCGAGGGGCAAAAAAGATTAAAAATATCGAGTGATAGCCTTCCATACTCAGA ACTTGGACAAACTGAGCAGAAGACACCCGGGAAATCATCAAATGTTGTGGATTATAGCAATCCATTTGCAGTTACTGATTTCCTCAATTGTTTAGACAGT GGGAAATTTGGAAGTGTAACAAAGGACATAGAGTCCCTTTTTACTCGAAAAATGCAAATACTGGGGACTTACTTTGCCAAATATCCATCACTGCTTGATC ACTTAGTGAATGAGGTAGTGAATCATGAAGAAACCCATACGCTGGAATGTCAAGAAGTTGCTGATTTGGAGGCTAAGCATGTTGACAAGCATGTTCCACC AGCACCATCATCTGTTGTGATTATTGATTCAGATGATGACGAAGATAGAGATCAAAAATCATTTCTTCCATTTCATAAAGTTGTGTTGCCGAATCAACCA TCTCCTGCAGTGAAAATGACTGAGTCTCATCCTCCCATTCGTTACAGTGAAGAAAATAAAGATCTAAAATTTGACACAAGTTTTTTTTATAACGGTAACA ATGGGAAAGGAAAAGGCAAGCATCTTGATGATAAAGGTAATAGTAGTCAAGACAAAGGTGTTTATGTTGGTGTCGAGGATGAAGAAGATGACCAGGTTGA TACAAAGGATGAAGAACTAGATGATATTTGGCGGGAGATGTCAATGGCAATAGAATGCTCCAAAGATGTTTCTGTGAACCCTCTGCCAGATGAAGAACCA AAAAAAGATGAGGATTGTGATCATTCTTTTGTTTTAAAAGATGATCTTGGTTATGTTTGTCGCGTTTGTGGGGTTATTGACAGAGGAATTGAAACCATTT TTGAGTTCCAGTACAAGGTTAAAAGGAGTACTAGAACTTATGTGTCTGATTCATGGAATGCCAAAGAAAAAGATGCATTTGGAATTAAGATTGCTGGGGA TGATCTCTTGGTAACTGATATATCAGCGCACCCTAGGCACATGAAACAAATGAAGCCTCATCAAGTTGAAGGATTCAATTTTCTTGTTAGAAACCTTGCA GGTGACCACCCTGGGGGCTGTATTTTGGCACATGCTCCAGGATCTGGGAAGACATTCATGATAATCAGTTTCATGCAGAGTTTTCTAGGCAAGTATCCTA ATGCTAGGCCTCTAGTGGTGCTTCCTAAGGGGATACTATCAACTTGGAAAAAGGAATTTCAAACATGGCAAGTGGAGGACATACCACTATATGACTTTTA CACTGTGAAGGCAGACAGTAGATCTCAGCAACTAGAAGTGTTGAAACAGTGGGTGGAGCGGAAGAGCATCCTTTTCTTAGGGTATAAACAGTTCTCTTCT ATCATATGTGAGAATGGAACTAACAGCTCATCAACAGCTTGCCAAGAGATATTGCTAAAGGTTCCTTCCATTCTCATTTTAGATGAAGGACACAATCCAA GGAATGATAATACTGATATGGTACATTCCCTTGCCAAAGTACAAACCCCTAGAAAAGTTGTACTGTCAGGAACTTTATATCAGAATCATGTCAAGGAGGT CTTTAACATCTTAAATCTTGTGAGGCCTAAGTTTTTGAAGATGGAAACTTCTAGGCTTATTGTCAAGCGCATTTTCAGTAGAGTACACATACCTTCTGGT AAAAGGGGCTTCTTTGATTTGGTAGAAGACACTTTGCAAAAGGACCCAGATTTCAAAAGGAAAGTAGCTGTTATACAAGATTTGCGTGAGATGACCAGCC AGGTACTTCACTATTATAAAGGAGATTTTCTTGATGAGCTTCCCGGTCTTGTTGAATTTACTGTGGTCCTCAATCTTACCCCGAGACAGAAGCATGAAGC TGACAAATTAAAGAAGTTATCCAGGAAGTTTAAGATTAGTTCTGTGGGTAGTGCTGTCTATCTTCATCCCAAATTGAAGCCTCTTGCTGAAAAATGTGGT GAAAATAGCATATCCTGTAACATAAAGGAATTGGATGATATCATAGAGAAACTAGATGTGAGAGATGGAGTGAAGTCAAAATTCTTTCGCAACATGTTAA ACCTATGTGACTCAGCAGGGGAGAAGCTTCTGGTTTTTAGCCAATACCTCTTACCTCTGAAATACTTAGAGAAGCTAGCTATGAAATGGAAGGGTTGGAG TCTTGGGAAAGAAATCTTTGTCATCTCAGGAGAATCAAGCACTGAAGAAAGAGAATGCTCCATGGAGAAATTTAACAATTCACCTGACGCCAAGGTCTTC TTTGGCTCAATCAAGGCATGTGGAGAGGGCATATCATTGGTTGGGGCATCCCGCATCATTATTTTGGATGTCCATCTCAATCCATCAGTTACTCGCCAAG CTATTGGCCGTGCTTTCCGGCCAGGACAGAAAAAGAAAGTCTTTGTATATCGGTTGATAGCTGCTGATTCTCCGGAAGAAGATGATCACAGTACTTGTTT CAAGAAGGAATTAATTTCGAAAATGTGGTTTGAATGGAATGAGTATTGTGGTGATCGAGCTTTTGATGTTGAGGCAGTTCCTGTGAAAGAATGTGGTGAC CTTTTTCTTGAAAGTCCAATGTTAGGGGAAGATGTTAAAGCTTTGTATAAAAGGTAGACCGTGTCATTATGTTCATTGGACTTGGGAAGGCCAATGTCTT TTGCTGTTATATGAGTACTTATATTGCTGGATTTTTGATTCAGAACAAAGGAATTACTGAATTTGCTATCTCATTAGCTAGTTATATGTGACTCATCAGT GTGTTTAAAATTAAGCTGCAGTTGTTTAGTGTTAAATTGTCCTAACTTGTTAGTACTACAACAATCAGGTTAATCATGTGTCAAATATGGCCTCAGCTTA TTATGTGTTGTTTGAAATTTTACAATTGCACTTTATTGAAAGAAATGAAGAGGTTCTTGTACATGCCTTTACTTAG BLAST |
Tissue | flowers |
Gene name | LI_gene_58212; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_61261
Blastp | Protein CHROMATIN REMODELING 35 from Arabidopsis with 56.69% of identity |
---|---|
Blastx | Protein CHROMATIN REMODELING 35 from Arabidopsis with 65.51% of identity |
Eggnog | helicase(COG0553) |
Kegg | Link to kegg annotations (AT2G16390) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449406.1) |
Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |