Ll_transcript_60540

• Id Trinity: FTRINITY_DN56213_c1_g2_i3
• Name Transcript: Ll_transcript_60540
• Sequence: TGAAATTATGAATGGGTTTTGTTTCTTTATGGAAAAAATTTCTTCTTCTTTTCTTATGGACCCCGTAGAGTTGCTTGTGGGATCAAGTTTCGAGGTTTGT GATTGGGTCTCACTCTCTCTGTCTCTCTTTTTGAATGTTTATTAAGGAGAGGCTATTACAGACAACCCTTGCTGAAGTTGAGGGTTGGAAACAAGAGAAG GAACCCAGAGAGAGAAAGTTAAATGCTGCTGAAAAAAGAAGCTGAAAGTTTTAAAGCAAGTTAAAAAAGCTGAGGAAAAAAGCCAAAAGGAAGAAAAGAA ATAAAAATAGCTTTTGTAATTTTCTTCTCTTCTTCTTCTCTATGTCCTAGCTAGGCCTTCTAGCTATATCATCATCTTCTTGTATCTCTCTTAATCTCAA TCTTCTCTTCCCTTGCTTAAATTCTATCAGAAATATAGAAAACATAGACTTTGTGCTTCATTTCTTAGGCTATTATCAATTATCATACAAGATATATATA CAACTTATATATATCAAACACTTACTATAGAGTGATACCATGTTTGCCAATAACTTATCTCCCTTATTAGTTCCAACTTCTGATCCTTCTTTCTCATCTC CTGAGAATGGTACTTCAACCAATAAAAGGAAGAGAAGACCAGCAGGAACACCAGATCCAGATGCAGAAGTAGTGTCACTATCACCAAAGACCTTATTGGA ATCAGATCGTTATGTGTGTGAGATCTGCAACCAAGGATTCCAAAGGGACCAGAATCTTCAAATGCATAGAAGGAGGCACAAAGTGCCATGGAAACTATTG AAGAGGGATACACCAATGGTGAAAAAGAGAGTGTTTGTGTGTCCTGAACCAACTTGTTTGCACCATCAACCATGTCATGCACTTGGAGATCTTGTTGGAA TAAAGAAACATTTCAGAAGAAAACATAGCAATTATAAACAATGGGTTTGTGAAAGATGTTCTAAAGGCTATGCTGTGCAATCCGATTACAAAGCTCATCT CAAAACTTGTGGCACTAGAGGCCACTCTTGTGATTGTGGCCGAGTTTTCTCAAGGGTGGAGAGCTTTATTGAGCATCAAGATGTTTGTAACATGGGGAGG CAACCTCATCAACCATTGCAACAATTACAACAACAACAACAACCTGCATGTTTGTCTAGAACAGCTTCAAGCCCAAGCCCATCAAGTGAAACCGATTTCA GCACATGCCCTAATTGGCCACAAGGGTTAGTAGTAATGCCAAAACCAACAAATGAACCCGCATTCTTCAATATGAACCCTACTTCTTCCACTATTGCCAT CAATGCTGAAACCTCATTAGCCAAGAAAAGGAATAATCTTAACCCCAACTTGGATCTTCAACTCTCAACAAACAACAACTCAAACATATCAAACACTTAC ACCTTCGATGTTGTAGCTGCATCATTGTCACCTGATAAAAGAGATGATGATAATGATCATCATCATCAAAAGCATTGCACACAGTTGCAGCTATCAATTG GTTCATCAGATAACAATGTGAAGAAAGACCAATCAAATAGGAACAACAACAACTCATCACCAAAAGAGACTAGTAGTGAGAAACAAGGCATGGCTATGTT AAGTGTAGCCATGGCAGAAAAAGTTTATGCTGAGGAAACAAGGAAGCAAGCAAAGAAGCAGATAGAATTAGCAGGACAAGAGTTCACAAATGCTAAGAGG ATCAGACAACAAGCACAAGTGGAACTTGAAAAAGCCTATGCTTTGAAAATGAATGCAGTGAAGCAGATAAACTCCATCATGCTTCAAATCACTTGTCATG CTTGCAAGCAAAAGTTTCAAGCACAAACAACAAGCAACACCCTTGATCATGAGAATAATAGCTCTTTGGGGTTAAGCTACGTTTCTTCTGCTCTAACAAT AGAAGGTGACGAAGTAGAAAACAATAATGGGAAAGGTCATTGGAAATCAAACAACTAATTCTCAGAGTTCATCTTATCTCTCCCTATATTCTCTATCTTG ATTTTTTCATCCATGTCCACCATCATTGGTTAATCTTTTATAATTACTACTAAATGTTGAAATGCGTGATTTTGATTAAGTGGGTGGGGAAAGAGTACTG TTATTCTTGTCACTCTTTATAGCTTATTATGGCATGTTATAGAAGAAGTTGATTATATTTGGCATAATAAATGCATATCATAAAGGAGCTTTCACTAAGA AATATATGGTTAGGTTTTGCTTATTTCTGTAGCTTTTATAATATGAC
• Tissue: flowers
• Gene name: LI_gene_58287;
• Additional information: details;

Expression of Ll_transcript_60540

FPKM

• FPAB: 0.1
• FPNAB: 1.3
• LF1: 0.3
• LF2: 0.2
• LF3: 0.3
• LF4: 0.4
• UF1: 0.4
• UF2: 0.2
• UF3: 0.3
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_60540

• Blastp: Protein SHOOT GRAVITROPISM 5 from Arabidopsis with 54.44% of identity
• Blastx: Protein indeterminate-domain 14 from Arabidopsis with 50.89% of identity
• Eggnog: Zinc finger protein(COG5048)
• Kegg: Link to kegg annotations (AT2G01940)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431363.1)
• Pfam: C2H2-type zinc finger (PF13912.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;