Ll_transcript_61494

• Id Trinity: FTRINITY_DN56259_c0_g4_i4
• Name Transcript: Ll_transcript_61494
• Sequence: GTCGCTACCTGATGGAATGGTTATAGCAAATGATCTTGATGTCCAAAGATGTAATCTTCTCATCCATCAAACAAAAAGAATGTGCACAGCCAACCTAATT GTCACTAATCATGAAGCGCAGAACTTCCCAGGATGCCGTCTAAACAGGAATCACGAAAGAATTGAGCCAGATCAGCATATTAGCCAACTCTTATTTGACC GTGTTTTGTGTGATGTCCCATGCAGTGGAGATGGTACTCTCCGTAAGGCACCTGATCTTTGGAGGAAATGGAACTCGGGGATGGGACAAGGGCTTCACAG CCTACAAGTTCTAATTGCTATGCGAGGCTTATCTTTACTCAAAATTGGTGGAAGGATGGTTTATTCAACCTGCTCAATGAATCCTGTCGAGAATGAAGCC GTGGTTGCAGAGGTTTTGCGTAGGTGTGGAGGGTCTGTTGAACTTGTTGACGTCTCTAGTGAGCTTCCCGAACTTATTCGTCGACCAGGTCTTAAGAGCT GGAAGGTATATGACAAAGGCACATGGTTAGTCTCTTGCAAAGATGTGCCTAAGTTCCGTAGAAGTGTAATTCTTCCTGGTATGTTTCCTTCTGGCGGAAG CTATCAGGACCTTGTTGAAAGTAATGGTAATGCTGACGTGGGAGAAGATATTAGTGTTTGTCCCAATGGAAATTCTGAAGATGGTTTACAAACAGTTGAG AATCCCGTGAATCATCAGTCCGCTGAGGAAGTTCCTTATTTCCCCATAGAGCATTGCATGAGGATAGTGCCTCATGATCAGAACACCGGAGCCTTCTTTA TTGCTGTACTGCAAAAAGTTGCTCCTCTTCCAGCAATTCAGGAAAAATCCAAATTGGAAATTGTTGAGCAATCTGTAGAACCAGTAAATCAGAGTCCTCA GGATGGACAAGCACTGCAGATTAATCCATCAGAAAGTGCCCTGGAAGAAATCTCCAAAGCAGTTTCAGAGGAAAATGTAAATGACCATGAACAAAATACA GAAGATTTAGAAGTTAGTCCTGTTGAAGAACAGGATTCCAACGAAACCAAAGAGCCCCCTAGTATAGAAAACATGGAAAAGAAGGTTCCAGCCAAAAGAA AGCTACAGATTCAAGGCAAATGGAGAGGTGTTGACCCGGTTGTCTTTTTCAAAGATGAAGCAATTATTAATAGTATAAGGGCATTTTATGGCATCAGTGA GCAGTTTCCACTTGATGGTCACCTTGTTACAAGAAACAATGAGGCAGGTCATGTGAAAAGAATTTACTATGTCTCCAAGTCAGTAAAGGATGTGATTAAG TTGAACTTCTCTGTTGGGCAACAACTTAAAATAACTTCTGTTGGCCTGAAGATGTTTGAAAGACAATCAGCGCGAGAAGGTAGCGATGCACCATGTGCTT TCAGGGTTTCATCTGAAGGATTACCCCTTGTTCTCCCATACATGACCAAACAGATTTTACATGCATCGCCAGAAGTCTTCAAGCGTCTTCTACAGGATAA AGATGTAAAGTTTGCAGATTTTGCTGATCCTGAGTTTGGTGAGAAGGCTGCAAACCTAATGCCAGGCTATTGTGTGGTGATTCTGGATAGAGGGAACAGA TCAGCTACAGAGTCCCCCAAAGTGGATGAGTCAACGATAGCCATTGGATGCTGGAAGGGTAGGGCGAGATTGACAGTGATGGTTACTGCAATGGACTGTC AAGAACTTCTTGAAAGGCTTTTAATACGTCTCGACCCAGAAAAGGGTTCTTCCATACCTGTGGACTGTTCCTCTTAATGTGGGAGGTGAATTACAGCATG TACCCGAGATCAACAGTAAATTTGATGATGATGTGAAAGCTGCAATGAGTTGAAAGGGACTGGCTAACAGATATTTAAGCTATTGCATTTACAGAAATTG CAACTTTTTCCTTCACCATGAAACATTGGTGATGGGATTGCTTATTTTGGTGAACCTCGTCATCATGTTTCTAGAACAAAGTCAGACGTTGGTTCATATT TGTATTGAGATATATTCTTCAGCTTTTGAAGGTTGTCATTATTTCTGGGAAGCTCTATTGCTGTACCTGTATGGATTAGGGACAATTTTATAGACACTAA AAAATCATTGCTGATACTCAGATTGTATGATCCATTCATGTGGCCACAAATCTATTATATCGACCGATTATCCACCCGTGTAGTTGTGATCAGTGATTTT TTGGGCGTTAAAAGCTGTTTTTAAATGTATTTTGGACAGAAGTTCTAAGTCCACACAGGTTATGTATTTAATAAGTCCACAATTATTTTGACATACCCTC CTTGGTGAGGGGTTACTATTTACATGTTAATATCTAAAGAATGATGATTTGATGATAAATACAATACATGCCAATCTTGTCTAGCCATTGTATGTTGTCT CTGAAGTTTAC
• Tissue: flowers
• Gene name: LI_gene_58636;
• Additional information: details;

Expression of Ll_transcript_61494

FPKM

• FPAB: 7
• FPNAB: 11.3
• LF1: 9.1
• LF2: 6.5
• LF3: 7.5
• LF4: 9.4
• UF1: 7.5
• UF2: 6.6
• UF3: 7.4
• UF4: 8.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_61494

• Blastp: tRNA (cytosine(34)-C(5))-methyltransferase from Gallus with 33.81% of identity
• Blastx: tRNA (cytosine(34)-C(5))-methyltransferase from Gallus with 33.81% of identity
• Eggnog: nOP2 Sun(COG0144)
• Kegg: Link to kegg annotations (420938)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462085.1)
• Pfam: 16S rRNA methyltransferase RsmB/F (PF01189.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;