| Id Trinity | FTRINITY_DN56308_c5_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_219294 |
| Sequence | GTGATGGGCTAATACGATGCTGGGATGTTATATCGGGCCATGAAGTCTATAGGATTACAGCTGGACTTGGAGGTTTGGGCAGTGGACATGATCTTTGTAT ATGGTCATTACTGTCCTTAAGGTCTGGGGCACTTGTTAGTGCAGACAGCAGTGGTACTGTTCAATTTTGGGACAGCCATCATGGGACTCTCTTGCAAGCT CATTCACTACACAAGGGAGATGTAAATGCTCTGGCGGCAGCACCTAGTCATGATAGGGTGTTTTCTGCTGGTTCTGATGGTCAGGTATAGAGTTGCATAG TTTGTTGAATCTATATGAAACCGAAGTTGTTAATATTTTTTTACGTTGCAATGAGCTATTAATATTTGTTTTTCATGAATTCAATGCCTCAAAACTTCAT TTGCTGTTTGGCAATTTTTGTTACATTAGTAATTAGTATAAGTACTGTAACACAATAAGTTATCTCATTATTTCCAATATTTTGTAGACATGTTATGCTA TTCTAGTACTTACTGCTTATTTTAATTTCAGATCCTATTTTTGCATAATTTGTGTACTTTTTTCTTCGAATTAATTGGAACAGTGTTACAACAATGGAAT GTGTATGGTGTTTTGGATGGTATGATCATTTCAGAATGGCATGTTGCTATATGAGTGAAATCCTTAATGTTTTTAAATAGTACAGTAATTGAGAATAAGA TGGAAAACAAACATCATAAGTTGATATGCTTGAAATGGACAGCTATAATATCTCAATAGGATGACATGTGAGAAAGGCTCACGTGAAGGATTCCATCTAC TTGTCTCCAAGAATTGAAGCAATTATAATCTCCAAAAGCAGTGACCATCTTTACACTTTAATGTGTACATTTGGGGTTTTGTGAGATGGTTGAAATCCTT CGAAATATATTTTTACCATGGCCTGAGTCAGTACTGACTTTAGCATGATTCATACTGTCTTATCACTGTTAATAATGACCGACCAGTACATGTAATATTG ATACGTTGTTGTGAATTGATTGAAGGTGTGCCTTGGCACAATTGTTAAGGTTGATGCCATGTGACAAGGAGGTCACAAGTTTGAGTCGCGGAATCAGCCT CTTGCAAATGCAAGGTAAGGCAGCCTACTGTGGAGTATAGATCCACTCAGTGGGTCAGACTCTTTCCTGTTCGTTGCACATAGCATTAGCTTTAGAGCAC CATGTTGCCTTTTTTATACATCTTGATATGATTCCTTGTTGATTGGTAGGTTTTCTTGTGAGTAAACAGTGTTGCAGCATTGGTTGAAGTTTCCGAAAAA CCACTCATTATATTTGTTCTTCGAGATTGAGCCAAGTGGGTAACAGAATAGATACAATAACATTATTGAGCGAGGCAATTATGATAGGCACTGATAGGAT GAGCACACTCACTATTGTTGCTTTTGATATGTATAGATTTTACAGTCTGGTTTTTTCCCGTGCCTCTTTTTTCTGCCTTTAAACATATAGATTATTCTAC ATATCCAATGTCTTCCCGGGTCCGTATCCTTTCTTTTCTATAAGAAAACTATCTTATCTGAATCTTGAGTTGTTTTGGTGGAAGTTCTTTTTCTATATAT CACATCATTATGTGTATGATTCTCTGTCTGCCCCATTTTCCTTAACCTACTAGCTAAGTGCATTATAATAATGCTGGTGTAGTTTATTTTATTTGAAGGT TATTCTTTATAAGCTGTCTAGTCAGCCAGCGTCATCTGACGGTGTCAATTCTCCGATAATGATGAAAAAGTGGATCTATGTTCAATGTATAAGGGCTCAT ACACATGATGTCAGGGCCTTGACTGTCGCTGTACCAATAACTCAAGAAGATGCTTTGCCAGATGAGAGGGTTAAACGAGCTCGACGTGAAGAAAAACCTG TTGAGTTTAGTTATCATAAGTGGGCTCATTTGGGGGTTCCCATGCTTATCTCAGCAGGAGATGACACTAAACTCTTTGCATACCCTGTGAAAGAATTTAC TAAATTTTCTCCTCATGATATCTGTCCCGCTCCTCAAAGAACACCTATTCAACTAGTTCTTAATACTGCCTTCAATCAATCATCAATGCTTTTAGTGCAG TCTTCACATGGGTTAGATATCCATTTGCTACAACTCAGAAACATTCACACAGCTGGAGGCCGTGCAAAGACTGAAATGCTTGCCCGAGTCAAGAGTAAGG CATCTCAAAAGATAATTTGCAGCACCATTTCTAATTCAGGCATGCTTTTTGCATACTCCGACCATTTGAAGCCTAATCTCTTCGAATTGAAGAGGTCTGA AGGTGGGAAAGTTACATGGAGTGTCAGTAAAAGGAAACTTCCTTCCAGATTACCATTTGCTCATTCCATGATTTTTACTCATGACTCCTCTTGGTTGATA GTAGCTGGGCATGATAGAAGGATATATGTTGTGGATGTGGGAAGCGCAGAACTAGTTCATACCTTTACACCTTGTCGTGATTTGCAAGATGAAAAACTAC CTCCAACGGAGCCTCCAATAACAAGATTGTTCAGCAGTTCTGATAAGCAGTGGCTGTCAGCTGTGAACTGCTTTGGGGATATATATGTATTTAACTTGGA GATACTAAGGCAGCATTGGTTCATTTCACGATTAGATGGTGCCTCTGTTACTGCGGGTGGATTTCCGCCCCAGAACAGCAATGTAATGATAATTACAACC TCCTCAAATCAAGTGTATGCATTTGACATAGAAGCCAAGGAGTTGGGAGAATGGTCAAAGCGTCACACTTATGTTCTTCCCAGGAGATACCAGGAATTTC CTGGTGAAGTTATTGGGCTTTCATTTCCTCCCTCATCGTCTTCATCTTCAGCTGTTGTTTATAGCTCCAGGGCAATGTGTTTGATTGACTTCGGGTTGCC TGTGGAGCAAGATGATAATGATATGCTAAATATTCAAGACCCAAGGGCCAAGAGTTCGCAAAATCTTGGTGTCAAGAGGAAGATTAAGCATAAGAACTTT AATGTTTTGCCATTAGAAAATCCAGTTTTATTTCTAGCCTACATGTCAAAAAATTCCTTCTTTATGATAGACAAACCTTGGTTGGAAGTTGTCAAAAGTT TAGAAGCCCCACCAGTCCACAGACATATTTTTGGGACATAAGACTATTGTTCTCAGCTCTAGGGTTGCATTGTGGGGTTAAGACTATTCTTTCACTTCAG TTTTTACCTCTCCATGGCTGGGTTCCAGTATCATGTATTTTGTATTTTCATAATCAATTTTGTTCTATCAGTAATAGAGTTACATTAATTTTTTGGAAAA AAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_59038; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_219294
| Blastp | U3 small nucleolar RNA-associated protein 4 homolog from Mus with 25.43% of identity |
|---|---|
| Blastx | U3 small nucleolar RNA-associated protein 4 homolog from Mus with 25.79% of identity |
| Eggnog | cirrhosis, autosomal recessive 1A (cirhin)(ENOG410XQNR) |
| Kegg | Link to kegg annotations (21771) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436965.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |