Id Trinity | FTRINITY_DN56337_c1_g2_i4 |
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Name Transcript | Ll_transcript_219060 |
Sequence | ATTTTTTTGTGGAGTGAGGATTTTTCCAATATAAAAGATTTTTAGTCCTTAGTTGTATATCAACCACTCAACTACCTAAACCCACCAACTCTACAATAAA TAACCCCTTTCCCTTCTCTTCCTTTGAACCAAACCTGCTCCACAGAAACAACACCATCTCAAAAACTCGATCTCCTTAAAAAAAAATTCAATTTTCCAAG AACCCTTTTTTGGATCAAAGTTAAGGACTTAAATGATGGTGATTCTAAGGCTTATTCTGACACTTTCTTTATTGAGTTCTCTACTTGTGATAACCTCAGC CCAGACATGCCTACAACAAAATTTAACTTCAAACAATGTTTTCACAACATGCCGTGATCTTCCACACTTGACATCTTATCTTCACTGGTCCTATGATCAA GCCACAGGGAAACTTGACATAGCATTCAGACACACAGGAATTACCTCAACAGATAAATGGGTTTCATGGGCCATAAATCCCAACAATGATCTTAGTTCAG CTATGCCTGGAGCACAAGCACTTGTGGCTATTCCACAAGCTAGTGGTGCACCGAGAGTGTATACTTCATCCATAGCTAACTATGGAACCTCTTTGGCTGA GGGAAATATCAGTTATCCTAACACTGGCTTAACTGCTACATATCAGAATAGTGAATTGACCATTTATGCTACTCTTACTCTTCCTAGTGGAACCACTTCA TTGGTGCACCTTTGGCAAGATGGTCCTGTATCTGGTTCTACCCCTCAGTCACATGCAATGGATAATTCTAATACTCAAGCTAAGGAGACTTTGGATCTTG TTTCTGGTGCTAGTCAGGGAGGAGGATCAACTGGTAATTCACTTAGAAGAAGAAGAAATACCCATGGAGTGCTAAATGCAGTGAGTTGGGGGGTATTGAT GCCTTTGGGTGCCATAATAGCAAGGTACATGAAGGTGTTCCAATTTGCAGACCCTGCTTGGTTTTACCTTCATGTCACTTGCCAAACCTCTGCTTACATA GTTGGTGTGGCTGGATGGGGAACTGGTCTCAAACTCGGCAGCGACTCGGTCGGTGTTACATATGACACCCATAGAACACTTGGGATCATCATCTTCTGCC TTGGAACCCTTCAGGTATGAAATTAAATGTCCATTGTTTGTTTAGTAAAAACGATATTTGTACACTAAGTAGTTAACTAAGCATGTTATTTGAACATAAA ATTTGACACGAGGTACATCTTTTTATCCTCATATACATATGTTTTAAAGTTCAAACACTACATGATTAATATCCTCTACCTTCACCATATAATATACTTT GTTCATCAATTATTTGGTATTAGAAGTTATGTAAATTGAATAGCATAACTGGTTTATTTATGATGTGCCTACTCTGAATGTTGTGTGACTATTGTAATAG GACTAATAGATACCTCTGCTATTGTATACAGGTTTTTGCTCTGCTATTGAGGCCTAACAAAGATCACAAAATCAGAATCTACTGGAACATTTACCACTAC TTGATCGGATACTCGACCATAATCATCAGCATCGTCAACATTTTTAAAGGGTTCGAGGCATTGGAGGTTTCCGTCCAGGACCGCTACAACAGCTGGAAGC ATGCATACATTGGTATTATTGCAGCTTTGGGTGGCATTGCTCTCATTTTAGAAGCTTACACATGGATCATTGTGATCAGAAGAAGGAAATCGGAGAGTAA GACAGCACACGGCGTTAACGGAACAAATGGTGTTAATGGATATGGTTCTAGGCCTCAGCAGGTGTAGGGTTAGTGCACCAGATATAGTAGATTTTTGGCT TCTGAATCCTATCTATATGAGTCTTGTTGTTGGACCCTTTCTGTATATTTTTGGTCACATATATTGAGTATTTAGAATGCTCTCAGCTTCTTAGAGATTG GTTTTGAGATTATTCTTTCATAGGATAGTGAATTCCTGGGGTTTGGTTTTCTCCATTCTATTCCAGATGATACTTTGTATCGTTTTCTTTATATATTGTA TTTATTTGTTTCCTTATATCTTCACTTTCTCAACACCTTAGAGTTTCAAATACTTTTTATTATGTTATCTCTTGGGGCAAGATGAAGGCATTTAAAATTT CTTAATTTGACTGTTAGGGAAGGACCTGAAGTTTTACCATAAATTCTTTAAAGAAATTATCCATCTCACGGAGTTTTAAGTTTGTTTAACACAATCTTCC CTGTCTATGTTTAATTGATTCACAC BLAST |
Tissue | flowers |
Gene name | LI_gene_59288; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_219060
Blastp | Cytochrome b561 and DOMON domain-containing protein At5g47530 from Arabidopsis with 51.93% of identity |
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Blastx | Cytochrome b561 and DOMON domain-containing protein At5g47530 from Arabidopsis with 52.9% of identity |
Eggnog | Eukaryotic cytochrome b561(ENOG410ZKV6) |
Kegg | Link to kegg annotations (AT5G47530) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419294.1) |
Pfam | Protein of unknown function (DUF568) (PF04526.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |