| Id Trinity | FTRINITY_DN56340_c4_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_218354 |
| Sequence | CCAAAAACAGGTAAACATAAACATGCTTGTTCCACATCTTCTCAAAACTGTTTCATTTTTAACAATGTTATTGAGCAATGACACTTCAATATAATTCCAA CTTTTTTCTTGCTCCATCTATGTTAGCATTGTAATGTTGTTAAGTTCTTCCCCTGATGCTCATTTACATAACTATATACTTGCTGCCTATGTAGCACCAA TACTTCAAAATGTTGTTGTACATGTATGATATTTAGTTGTTTTTTTTATCAGCATGATATTTAGTTGTTAATAAGCATATATGTATTTATTGGGTGTATT TAAGTATGGTTTTTCATATTAGATATAAGGTGATGAGTGAAAGAGTTTATAAGTGAAAATGATAGACGTGTTGTCTCACTTGTAGCTCTGCACTCTTTGC ATGCCCCAATAACAAGGAGACTCCCTACTCGTTGGAGGCTCCCCGATGGCAATGGAATCCAACAAGTGGTATCAAAACTGATAATTAGCTTCGGCGAGTG GACTTATAGGGGAGCAGAATAGTAAGTGTGCGGTACACACCATAAACACTTGAGGAGAAGATTGTTGGGTTTATTCAGTGTGAAGTCTCACATTGCATAT GATTACATATGAGTGATGAGTGAAAGAGATTATAAGTGTAAAAGACTCATGAAACCATTGTCTTAAGGTTTTGGTTCAAGACGTGATGTCTCACTTGTAC CTTTATACTCTTCCCATGGTATCCACAATTGAAGGAGAGATTGTTGGGCTTATTAAATATTGATCACTATTGGACCCCACTGTGCCCTGAAGCCTCCAAA CTAGGAAGTTCCATTATCACTAGGGCATGAGAAGCGTGAAGAGCCATAAGTGAGACACCATGTTTTGAACGAAAACCTCCACGAGTCTTTTCCACTTATA AATTCTTTCACTCACCCCCCTATACCCAACATATCCAATTTGAGACTTCACACTCAAATAAACCCAACAATGTCATATATGTTTGATATTTCAAGTATGA AGAAGAAATCCCATATTGTGTAGAAGTGGATGAGTAAAGAACATATAAATTGATGGACTTATAGACCTAATACCTTAAGGTTTTGGATTAAGATTGGTGT CAAACCCATTTTTATGTTTCTTTTGCTTAGCATATGGAAGAACAATTTAGCCAATGGATGAGGATCTACCAACAAGTGATATTAGAGTTGATGGTTCGAT TGCTCAACTGAATATTAAAGAGATAGTTGGTCGATAGATCCACGTGAGATTCTTGTATCGATAGTCTTCTTGATGAGAGGTTAAAGTAATCATTTATTGA TGAAAAAAACAAATCAACATCGATGCAAGTAGATAGAATTTTGAGTTATAATGTGTTTGACACTCGAAGGAGAATAACTCACACTTAAGTATAGTTAGTT TACTTGCTATGAAAGGAAGACATTGTATTTGAAAATCAGTTGTTGAATAATAATATAGAAAGTTCTCACTCCATTCTTTTTTCTTTCTCTGCATTCATTT TGTCTCCATTCCTTTCCTTCACTTTCTTCATTCACTATCTAAGTCTTTCAATATACACAAACTTCAGAACTAAAGGTACGGTTCCAACAATGGTATTAGG AGCATCAAGATCTAGGATTTTGGAGGTGCTTGTCAAGGTGAAAGGAGCTTCAAGTAGAGGAGATTTGGTGAAGATCAGCAAGATAATAGGTGAAGTGAAA ATTGCAAGGAGGAGATGTCATCCTCACATGGGTTCTCAATGAATCTTCTAATTTTTTATGGGAAGAACTATGATCATTGGAACATTCAAATGAAGGCAAT ATTTGGGTTCAAAGAATGTCTTGATGTTGTGCAACTTGGATTGCAAACAATAGAGGAGAACACTACTGAATATAGGGAAGCCAAAAAGAGAGATTGCAAG GCAATCTTCTTGATTCATGAATGTGTAGACAGTTCCAACTTTGAGAAGATTTCTGTAGCTTCTTGCTCCAAGGAAGCATGAGAAATCTTGGAGAAAAGTT ACTCTAGTGGAGTGAAGGTGAAGAAGGTGAGACTCCAAACACTTAGGAGACAATATGAGTTGCTACAAATGGAGGAACACAAAACAATTGCAGATTACCT TACAAGGATTTGTGGCTTGGTCAATCTAATGAAGGGGTGTGGAGAAAATCTGTCTGAGCAAGGTGTAATGAAGAAGATACTCAAAACACTCACTCCCAAA TTTGATCATATTATAGTAGCAATAGAGGAGTCAAAGGATCTTGAAAACTTCAAGATTGATGAACTGCAAGGATCCTTGGAGGCACATGAACAAAGGTTCA TAGAAAGGTTGGTTGATAGGCAAAAAGTTGTGAGTGCTCAATTCAGACAGAAGAATTCCGATCACTTTGACAAGCACAAAAGAGATAAGAGTAAATGGCA TGGTGATAGGAGAAGTGACGTTGCAAACTCAAAATCATGTGGACAAGGATTTCAAAAGTCTAACTCTAGCCATCATAACCATGATTCTGAGATAAGCATA ACCAAGAAAGGGAGCAATCAATAGAGTGAAACAAAGAAGAGGGAGAAAAGTAAGATTCAGTGTTTCAATTTCAGGAATTGAGAACATTTTGCAACAGAAT GCAAGATCAAAAGGGCCACCAATGTGAAAGAAGCAGAGGCCAGATTGGCTAAAGATGAAGAGGTACTACTATTAGCAAGAAGAGAAATTTCATGCCTTAA TTTTACTGATTCAAAGGAGGACTCAGATGAAGAATTGTTGATGGTGACAACCCAAGATGATCAAAAGTCAGATAGCTGGTATATTGACATAGAGTGTTCC AACCATATGACTCGCCATAAAGAGTGGTTTGTGACCTCAGAAAACTCTGTGGAGACAAAGATCAAATTTGCAGATGATAGTTTCATCACTACAAAAGGAA TTGGAAAAGTGATAATCAAGAAGAAGGGTGACTCAATCTTATACATCTCAAGTGTTCTATATGTACCAAGAATGAAGAGTAATCTTCTAAGTCTTGGTCA ATTACTTGAGAAACATGAGATTATAGGACACGATGCTCAAGATATTCAACAAGAAAGGATTGTTGATCTTGAAGGCTCCATTATATTAAAATAGAAGCTT CAAGATTGGTATTTAACCTGTAGATCATAAATGCTTGGAATCAATTGTAGATGACACATGGATTTATTATCAAAGGCTTGGTCACCTCACCTTCAAGAGT CTAGAACTGTTAAGCAAGGATGAAATGGTAACTGGACTGTCTAGCATCAAAACTCCAATTGAGGTATGCGTTGAGTGTCTCACAAGTAAGCAAGCAAGAA ACTCATTATGCTCACAAATACCAACAAAGTCCACCAGACTACTTGAAGTTGTGTACACTGATATGTATGGTCTCTTGGAAGTTCAATCACTTGGAGGGAA CACCTACTTTGTAACCTTCAATGATGACTTCACAAGGAAACTGTGGATCTATTAGATAAAGAAGAAAAGTGAAGTATTTGATAAGTTTAAGAGTTTCAAG ACCCTTGTTGAAAGGCAGTGTGGCAACAAACTGAAATTGTTAAGGAGTGATGGTGGTGGAGAGTATGTATCTCATGAATTCCATGACTTCTGTGATAGAG AAGGAATAATACATGAGATAATTGTATCAATTACTCCTCAACACAATGGAACAACAGAAAGAGTCATTAGAAGCATTCTAAGCATGGCAATGAGTATGCT GAAAACAAAGTAGCTTCTAAATTTTTTTGGGAAGGCTGTGGCTGCTACAACATACATAATGAATAGATGCTCTAGAAAGAGGTTGAAGAATGTGACACCT GGAGAAGCTTGGTCATGACTCAAGCAGTGAAAAAAAAGTTGTTGGACAGAAACAATAAAGGAGGAAATTAGATCAATTGAGAAGAACGACACATGGGAGC TTACAACATTACCAAAGGGTAAGAAGGCCATCTTAGTAAAAATGGGTGTATAAGGTGAAGCTCAAGCCTGATGGAACTGTGTCTAAATACAAGGCCATGT TGGTGGCCAAAGGGTTTTGCAAAGATCAGAATTAGATTTTGATGAGGTTTTTGCTCTAGTGGCAAGAATGGAGATAATAAGACTTGTCACTGCAATTGTT ATCTCAGAGGATCGATCTTTATGTCAAATGGATGTGAAACAAGATTTTATGAATGGTCCATTAGATAAGGAAGTGTTTGTATCACAACTTCCAGGCTTTG AAGTACCAAACCAAGATAATAAGATGTATAAATTGCATAAAACACTGTATGGATTGAAACAATAATAATATGCTTATTATATGTAGATGATTTGCTTATA ACTTGGCAGAAAGGATGATAAAATAGAATGATTCAAAGCAAAGTTGAAACTTGAGTTTGAAATGTCAGACTTGGGAAATCTCTCATATTTCCTAGGAATT GAATTTGCTAGGACTAATGAAGTCATCCTGATGCACCAAAGAAAGTACATAGCTGATGTACTTGAGAGGTTCAATATGCTTGAGTGCAACTCAGCTTCAA CTCCAATTGAAACTGGTCACACTCTAAGCAAGGAGAACTCTTAGAATTCATAGGCTAAAGCAGTTGATCCAACACTCTGTAGACAAATGATAGGATCATT TAGATACATCTGTAACACAAGGCCTGATCTAGCTTATAGTGTTGAACTGATAAGTAGATATATGCAGAATTCTAAGCACTCACATGTTGGCAGTGAAAAA GATACTCAAATGCCTCAAAGGAAGCATGGATTTTGAAGTACTATTCCTACCAAAAAAAGCAAAGAACTCAGTGAAGAACTCAACACAATTCATGGCTACA CAAATGCTAAGAGCACAAGTGGATACCTATTCAAGCTTGACAATGCCGATGTGAGTTGGTGCTCTAAGAAGCAAAAGGTTGTTGAGGATGATAGAAATAG GACAAGTGAATACCTATTCAAGCTTGGTAATGCAATTGTGAGTTAGTGCTTTAAGAAGCAAAATGTTATTGCTCTATCATCATGTGAAGCAGAATACATT GCAGCTTGCTTGGGAGGATAACAGGCATTATGGCCGCAAGCTCAGTTTATGGAGTTGGGAATGCAGATGGATGAACCAATCCTGTTGTTTGTAGACAACA AGTCAACCATCAATTTAGTAAAGAATTCAACGTCTCATAGTAGAAGCAAACTCATAGAAACCAAGTATCATTTCTTGAGAGATCAAGTGGAGAAGAAACT TGAAGCTAGAATTTTGCTAGACTCAAGAACAACAAGCTCACATACTCACCAAACCATTAAAAATAGATGATTTTCAAAGACAGAGAAGACAACTTGGTGA TAAGCTTAGCTAGTATGAATTAAGGGAGAGTGTCGAGTAAAGTGTAATTCATATAGCTAGACTCATTATCGATTAACGGTGTGCTTAATCAATTAACAAA TCTTATTGTTAGTTATAGTATAGTTAGTTTACTTGCTATAAAAAGAAGGCATTGTATTTAAAAATCAGTTGTTGAATAACAAGTCTGAGTCCATTCATTT TTCTTTTTCTGCATTCATTCTGTCTCCATTCCCTTCGTTTACTTTCTTCATTCACCATCCAATTCTTTCATTACACACGAAATTCAGAACCAAAGTCCAA AGGTTCCAATAACTTATGGATGAGCTTTATTTGCAAGATTGTATTAAAAGTCATCCATGAAAGTTTTAACCCCACTTTTCACCTCATATGAAACTAACCC TTACAGATTTAACTCGTGATATGTTTGATTATATTTAGTCAAAGCATACAATATTCTTGATACTTGATGAATCTCTCATCATAAATTATTTCTACTTTTT TACTTGTGTCAGTGTGTGTATGTTTTATTAATTGATTATGCTCTGTTTCCATGGCAGGGGGAAGCAACACCAGTTTAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_59308; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_218354
| Blastp | - |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 29.37% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451834.1) |
| Pfam | gag-polypeptide of LTR copia-type (PF14223.5) |
| Rfam | - |
| GO | - |