Id Trinity | FTRINITY_DN56377_c0_g1_i12 |
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Name Transcript | Ll_transcript_219015 |
Sequence | ATTTCTTCTATATATACATATATAACAACTTGATATTGCTCCCCCCTATGATTTGTGGTTATGGATGTATGGAACTAGTAGTATTTGGTAAACTGAAAAT GTTCCAATCATTTCATCTTATTACTGCAGCAATTTGCTGTGGAGTTTGTGTAACTAGTCAACAAATGAACAATTGTGGATGATAGCTAGAGTTCCATTGG AGACCATGTGAAGCTATATAAACTGTTTTTGTGTGTTTTGTGGTATAAGGAAGGGTATAGGGATTCCTCATAAGTTAGTCTATCCTACATTCCTACGTAT GGTATGTACGTTGATAACATTCCAGAGTTCCATTGGAGACCATGTGAAGCAATATATATACTGTAATCCTGTCATGTGCTTGTTGGCCTTCCAGATGACA TGATTGGGATAACATTCTTTAGAACTCTCCTTGTTTACATGAGGCACTGAATTCAATTTCAACAACAATCAAGCCTTATTCCACTAGGTGGAGTTATCTA CATGGATCACAATCACCATACGACCCCATTAATCTCTATTTAAGACCAAGTTTAGATAAACCTAAAAAAAGGGTGACCCCTAGTGCACGTTTGGGGAGGG TAAATGTACGCAGTCTCACCTGTTTGCAGAAAGATTAGATAAATTTGAGTAACTTTAACTACCCTAACAAAAATCGTAGTAAACACCTCTGACAAGTTTA CGTGGTTATCCGAATCTGAGGCCAAATGTGACAGGGATTGTCTGGAAATTGTGAATTCGGAATCCTTTGCCATAGGAAATCATCACATGGTATCTTAGCT GTATTCAAAATTCTTTTAACAATTGAGACCTTAATTTAAGATGCTATTAGATTTCAAACTTGTAAGAATGTACATTTACTTGTAACAAAATGCTTGTGCT CATCTTGTTTGCTTTAAATAAATGCAGATCAGCCTGTGTTAGGACAGGTGGGACTGCTTGGTTTGATTGCTGTAGTTTCAAATATATAAAGTCACTAATT AACAAGAAAGTAATATATATTTCAATCTGAAGTTGGTGGCGAATATGAGGATGCAAGACATTATCTTTTCTTTCCACTGCCACTAGGATCTTGTTGCTAG TTCACTGTGTATCAATTCACTATCCTGAACAATTCATTGATCATTTCAAGTGCTTCATCCCAAAGCCAAAATGAGTTGTTAGGAAGCAATTTCTAACTGC TAGCCGATGATAAAGTTAGAGAAATATTTGCATAAGTTTGGTAGTATGGTGATTATGCCCTTTTATTAAAAAAATCACCAAAATGAATTAGAATCAAGAA TTTATAATTTTCAGTGTCAAAACTGGAAACTGGACCCCTTTGCGTAGTTGAAGGAGAATCGAGTTAAGGAATAGCAGCTGTAAAATAAGGCTGGTTAAGG GAGTCTTGGAGTTATGGCGCATGACTACTAAACAATTTAGGGTCTGACTAAAAAATGTACCTACTTGACTTATTTGGTTCTCCATCGATTACAATTAATT TATTTTATCATGTTTTAGAGTTAGGATTTAGCCTTGATGTCTGAGCATTCACATCCTCGAATTTGTTGCACTTGTGTGCTACTTCAATAACAATTTGAAT AAATCTTTTCCTCTGATATCATTTTGTAGGTGATGAATTACATTCATGTGTCTTCCAAACTTAACTTTTTAAATAACATAAACAGTTTATGTAATGTTTT ACCCCCATAGGCAATTATTTGTTGTGATTTGTCCAGGGAAGGACTGAACGAGGAGGAGCAACAAACCAGTTACTTGAAAAGGGGAGTGAATGACCGGGGG AGGGTTGCTAATGATGTTGAGACAGAGCAGATTGTCCTTGTTGATGAAGCTGGCTCCTGCAAGGGAAAAATGAGTTCAGTTGTGCAAATGCGTGGCTCAA TTCCACTTTTCTGGTCACAAGAAGCATCGAGATTTAGCCCTAAGCCCGACATAATCTTGCAGAGGTATGATCCCACATACCAGGCAACAAAATTGCATTT TGAAGACCTTGCTAAGAGATATGGCAATCCAATTATTGTGCTTAATTTGATTAAGACTGTTGAGAAACGGCCTCGAGAAATGATGCTGAGGCGTGAATTC GCAAATGCTGTTGGCTATCTAAACCAAATTCTACCTGTAGAAAATCATCTTAGATTTATTCATTGGGACTTTCACAAGTTTGCTAAGAGCAAGTCTGCCA ATGTTTTGGCAGTTTTGGGAGCTGTGGCAAGTGAAGCACTTGATTTAACAGGTTTTTATTACAGTGGCAAACCCAACAACATAAAGAGGGCTGACAAGAG CAACCGAACAAGCACAGGAAGGGATACTTCGCTTAGAGATCTGAGAGCTAGCTCTGGAGATCTTGCAAGGATTGGAAGCAGTAATGAAATTCTAAACTCT GTAGTTAATCGAGACAGAGAGACTGAGATGAGTCATCAGAATAACAAAGATAATTTTAGTAGTGATGCACCACGTTTTCAGAGTGGAGTTCTCCGTACCA ACTGCATTGATTGTTTGGACCGTACAAATGTCGCCCAGTATGCTTATGGTCTTCAGGCTTTAGGACGCCAGCTCCATGCAATGGGTTTGACTGATGTGCC AAAAGTGGATCCTGATAGTAGCATTGCTGCAGCTCTAATGGACATGTATCAAAGTATGGGTGATGCTCTTGCCCAGCAGTATGGTGGTTCTGCAGCTCAC AACACTGTGTTCCCAGAAAGGCAGGGAAAGTGGAAAGCAACAACACAATCAAGAGAATTTCTAAAATCCATAAAACGATACTACAGCAATGCTTACACTG ATGGAGAAAAACAAGATGCAATAAACTTATTTTTAGGTTATTTCCAACCACAGGACGGAAAACCTGCCCTCTGGGAGCTGGATTCAGATTATTATCTCCA TGTATCTGGGACAGGGGATGATCTAATCCCTGAGAGGTGTTCTGAATCAAATCCTAAGCCTTCTACTAGAGCTGGAATGGCGTTCACTCCTGTACCAGCT TGCAGAGAGGACTTCACACGCATAAAATTGACTTCATTTGATAAGTTAATTGAAAAAACCTGCAGTACAATTAAGAATGTAAGACTTTTCAGTGAACCTG ATCAAAGACCAGGTGGTGGTTCTGTAAACAGTGGTGTCGCACCTGATGCAGCGGAGATACAGCTTAAAAGCCCAAATTGGCTTTTTGGTCAGAGAAAATA TGAAGAAGGAACCCCTGCTGCAAAAGTTGCTTCTCGTGAAAGTGATGTTGAAGGATCTCAAGCTAATGGCTTTTGCAACTTGAATTGGCTTTCATCTGAC AGTGATATGAATGAAGAGGATATTTTACAAAGGT BLAST |
Tissue | flowers |
Gene name | LI_gene_59645; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_219015
Blastp | Phosphoinositide phosphatase SAC1 from Arabidopsis with 74.8% of identity |
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Blastx | Phosphoinositide phosphatase SAC1 from Arabidopsis with 75.9% of identity |
Eggnog | Phosphatase(COG5329) |
Kegg | Link to kegg annotations (AT1G22620) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019465463.1) |
Pfam | SacI homology domain (PF02383.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |