Id Trinity | FTRINITY_DN56377_c0_g1_i27 |
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Name Transcript | Ll_transcript_219030 |
Sequence | GGAACATTACATAGTTTGAAAGGTTGTATTTATCTCTCTCCTCTTTGTTCCGGAGTTAACCCTCCATTTCCGCAAGTGGGGCAACTCTTTAGCCCAAATC CTTGGCACTCGAAACATCTAAAGACCAATGCATGATTTTAAGTGACCAACAAAATTAACTACATAGATACATAGATACAATTTATATTGAGGGAGAACAA AAAAACTTACTTCCATCTTTCAAATATATTTCCATTCTTTTTATTCCTCCCCGTCCCCTGTTATGTGATAATTCCAATATTGTTATATTTATAAAATTTA TTCTTTTGAATAAAATGTTTTATATTTGTAATAAGATGTTATCCTTTTATTAGAACTAACCTTACATCCAGGGCATTCGGTGGCTCCTGTTCCTCGGCAA GTTTTACAAGCACTCAGAATCTGCACCACTTCTCATCACAATCTCTTTCAAATATATGAATGATGCAATAAGTGGACATAAATTGAAACATACCGAGTTA AGTGAAGCAGACGGTACGAGTCTTGGTTTGGGTGCTATAATTGTTGGGTGAGACAGGAAATGAGAAGGAGTGATCTGTTTTGGTAGCAGTGGAGGAGGAT GAGCCGCTAAGCAAATTGAGATATGTGACATCTTCCCTCACTTCAGATATGTAACAGCTATAACAGATATATATGTAATAGCTAACAACTTCAAAGGTTG ATATTAATAGATGAGGTCTTATTGTGTGTGTGGTTCATATTTTTACATTTTTCTTTATCTTTATATATTCAAATAAAAAATAGAAATAAAAAGCGTGGAG CGGAACCTCTCTTTTCTGTTTTGTGAAGATGACGTCACCATCATCAGATGATGAAGTGCGCCCTGAGAAGTTCAGGCTGTATGAAACTCGAGCGAGATTA TACCTGATCGGGTGTGATCGGAAGAAGAGATTGTACCGTCTCCTCAAAATAGATCGATCAGAACCGTCAGATCTGAACATAAGCGAAGATCCAGTCCTGT ACTCACCGCAAGAGATAAACAACCTTCTTCAACGCATCTCTCAAGGTAACAAGGCCACCGGTGGTCTCACTTTCCTCGCTAATGTTTTCGGAATCGCCGG TTGCATCCACTTTCTTGAATCCTATTATCTCATTCTTGTTACTAAGAGAACTCAAATTGGTTCCATTTGTGGTCACCCTATCTATTCCATCAACGACACT CAATTCATTACTATTCCTCATCTTTCTATTCAATCCGATTTAGCTCACTCTAAAACCGAACTTCGTTACAAAAAACTCTTATCTAGTCTTGATTTGACTA AGGACTTTTTCTTTAGTTATACTTACCCTGTCATGCAAAGTTTGCAAAACAATATCTCCTTCGGACAACAAGGCATGCCTTATGATAATATCTTTGTTTG GAATGCTTACTTGACACAACCTATTCGATCAAGATGCAAAAACACCATTTGGACTATAGCTTTAGTTCATGGCCATTTTAGGCAGAATCGTCTATCAATC TTTGGGAGGGACTTCAGCGTTTCTCTGATTTCTAGACGATCTAGGCACTTTGCTGGGACACGTTACTTGAAAAGGGGAGTGAATGACCGGGGGAGGGTTG CTAATGATGTTGAGACAGAGCAGATTGTCCTTGTTGATGAAGCTGGCTCCTGCAAGGGAAAAATGAGTTCAGTTGTGCAAATGCGTGGCTCAATTCCACT TTTCTGGTCACAAGAAGCATCGAGATTTAGCCCTAAGCCCGACATAATCTTGCAGAGGTATGATCCCACATACCAGGCAACAAAATTGCATTTTGAAGAC CTTGCTAAGAGATATGGCAATCCAATTATTGTGCTTAATTTGATTAAGACTGTTGAGAAACGGCCTCGAGAAATGATGCTGAGGCGTGAATTCGCAAATG CTGTTGGCTATCTAAACCAAATTCTACCTGTAGAAAATCATCTTAGATTTATTCATTGGGACTTTCACAAGTTTGCTAAGAGCAAGTCTGCCAATGTTTT GGCAGTTTTGGGAGCTGTGGCAAGTGAAGCACTTGATTTAACAGGTTTTTATTACAGTGGCAAACCCAACAACATAAAGAGGGCTGACAAGAGCAACCGA ACAAGCACAGGAAGGGATACTTCGCTTAGAGATCTGAGAGCTAGCTCTGGAGATCTTGCAAGGATTGGAAGCAGTAATGAAATTCTAAACTCTGTAGTTA ATCGAGACAGAGAGACTGAGATGAGTCATCAGAATAACAAAGATAATTTTAGTAGTGATGCACCACGTTTTCAGAGTGGAGTTCTCCGTACCAACTGCAT TGATTGTTTGGACCGTACAAATGTCGCCCAGTATGCTTATGGTCTTCAGGCTTTAGGACGCCAGCTCCATGCAATGGGTTTGACTGATGTGCCAAAAGTG GATCCTGATAGTAGCATTGCTGCAGCTCTAATGGACATGTATCAAAGTATGGGTGATGCTCTTGCCCAGCAGTATGGTGGTTCTGCAGCTCACAACACTG TGTTCCCAGAAAGGCAGGGAAAGTGGAAAGCAACAACACAATCAAGAGAATTTCTAAAATCCATAAAACGATACTACAGCAATGCTTACACTGATGGAGA AAAACAAGATGCAATAAACTTATTTTTAGGTTATTTCCAACCACAGGACGGAAAACCTGCCCTCTGGGAGCTGGATTCAGATTATTATCTCCATGTATCT GGGACAGGGGATGATCTAATCCCTGAGAGGTGTTCTGAATCAAATCCTAAGCCTTCTACTAGAGCTGGAATGGCGTTCACTCCTGTACCAGCTTGCAGAG AGGACTTCACACGCATAAAATTGACTTCATTTGATAAGTTAATTGAAAAAACCTGCAGTACAATTAAGAATGTAAGACTTTTCAGTGAACCTGATCAAAG ACCAGGTGGTGGTTCTGTAAACAGTGGTGTCGCACCTGATGCAGCGGAGATACAGCTTAAAAGCCCAAATTGGCTTTTTGGTCAGAGAAAATATGAAGAA GGAACCCCTGCTGCAAAAGTTGCTTCTCGTGAAAGTGATGTTGAAGGATCTCAAGCTAATGGCTTTTGCAACTTGAATTGGCTTTCATCTGACAGTGATA TGAATGAAGAGGATATTTTACAAAGGTGTGTATCTAAGAAGTGCATTATCCACACAATTTCAAATACTCTATGCCCCTTCCATTTTGTTGTATGATAATT GGTGCCCCATCTAGTTACTTTTAGTACTAGGTAACACCTTCAGTTTAGGTCACCACTTAGTTATTTGATGC BLAST |
Tissue | flowers |
Gene name | LI_gene_59645; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_219030
Blastp | Phosphoinositide phosphatase SAC1 from Arabidopsis with 75.39% of identity |
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Blastx | Phosphoinositide phosphatase SAC1 from Arabidopsis with 74.68% of identity |
Eggnog | Phosphatase(COG5329) |
Kegg | Link to kegg annotations (AT1G22620) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019465464.1) |
Pfam | SacI homology domain (PF02383.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |