| Id Trinity | FTRINITY_DN56402_c2_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_202871 |
| Sequence | GTTAAAAACAACTTGTCCGTTTACTTGACTTCTCTCCAATTTTCTCTCTCTTCTCACTTTCTCCATAATTTCCCCTTATTTCCAAACTCACTTCTTATCA TCTCTCTCTCCTTCTTCACCGGATATTCCGGTTCAATCTCCCAACTTCAGACAGTTCCTCCTCCCTTTTCATTCACCGGAAGATCCAGTTTTCCTCTACC AACAAGGCTATGCATATGTCTATGTGATCATTGTTTGAAAGATGTTTGACTGCGGTTACAAGTCAAAATACATGGGTGGCCAGCGGGAAAAGTTTGTGAG GTTGGATGACTTGGATTCTAGACTATCTTCACCTTCTAATGCTGGAACCAGAACACATGGATTCAATATTGATAAATTAAGCCATGGTGGCCATGGAAGC AGTGCAACAACCTCTAGGTCTTTTAAAAGGGGAATGAAAAAGGGATCTGAAGGCCTGAAGTCTATTGGTCGAACACTTGGATTTGGGGTACCTAGTGCAG TGTTCCCAGAAGATCTTAAAGTTTCAGAAAAGAAGATATTTGACCCTCAAGACAAATTTTTGCTGTTGTGGAATAAGCTTTTTGTTATCTCATGCATTTT GTCTGTGTCTGTTGATCCACTGTTTTTTTATCTCCCTGTCATCAATGATTCACTGAAGTGTCTTGGTATAGACCAAAAGTTAGCAATTATAGTTACCACC TTGAGGACTGTTATCGATGCTTTCTATCTTATACACATGGCTCTCCAATTTCGCACTGCTTATATTGCTCCATCATCTCGTGTTTTTGGACGGGGTGAGC TTGTGATAGATCCAGCACAGATAGCCAAGCGATACTTGCGGCGATATTTCATTATTGATTTCCTATCAGTGTTGCCCTTACCACAGATTGTGGTTTGGAG ATTTCTTCAGAGGTCAAAAGGTTCAGATGTACTAGCAACAAAGCAGGCCTTGCTGTTCATTATCTTGCTCCAGTACATTCCCAGATTCCTTCGGATGATA CCATTGACTTCAGAACTTAAGAGAACAGCTGGTGTCTTTGCTGAAACTGCATGGGCAGGTGCTGCATATTATTTGCTCTTATTCATGCTTGCCAGCCATA TAGTTGGGTCATTTTGGTACTTGTTAGCTGTTGAACGCAATGACTCATGCTGGCAGAAGGCTTGTAGAGAATCTATTGACACCGTGTGTAATAAAAACTT CTTGTATTGTGGCAATCAATACATGAATGGTTACAGTGCCTGGCAGAATAAAAGTAAAGATACTCTCAATTCTGAGTGCTCTACAGATGATAATGCACCT TTTGATTATGGAATTTTCGAACAAGCCTTGTCATCTGGTATTGTTTCATCTAAGAAGTTCATCTCGAAGTACTGTTACTGTTTATGGTGGGGGCTCCAGA ACTTGAGTACACTTGGACAGGGGCTTCAAACTAGTACCTATCCTGGGGAGGTCATATTTTCAATAGCACTAGCAATATCTGGCCTTATCCTCTTTGCACT TCTGATTGGTAACATGCAGGTATACATAAGATCAATTAGTTTAACATGTGAATGATGTAGGTGAGTCGGATTAAAGGACATTAAATGGTGTACTAGCCTC CAAACGGTTATCTAGAATTATTTGTATGAGCAGCTGGAGTTGACATATGATCTGCTATAACATTACATCGAGGAAAGATTGATTTTTTGCCAGATATCTT TTTCTCCGGCTAAAACATGTATAGTTTAAATGAATGCCATTGTTGCTAGATTTTCTGTGTCCTTTTTTTTTTCAGAATTTAAGTATTCACACTAAGAAAG GTCTAAGATGGTTCTCCATGAAGGATTTAGAACAAATATACATTTACATGTGCACATACTGAGGAAAGAGCATTCAATGTTATTTTGCTAGTTTTCTAAA TATTGTTTCTTCTTATTATATACTGGCTTTTAAACAGCTTTCAAATTTATGTTCACAAGCATGAAGAGCAGATTATTTGTAACTGATACCGAGGTTCTTT TTATATGATTACAGACGTATCTTCAGTCTCTTACCATTAGGCTTGAGGAGATGAGAGTCAAAAGGCGTGATTCAGAACAGTGGATGCATCATCGCTTGCT CCCACAAGAGCTTAGAGAGCGCGTGAGACGATATGATCAATATAAGTGGTTAGCCACACGCGGTGTAGATGAAGAAAGTTTGGTTCAGAGTCTACCGAAG GATCTTCGAAGAGACATTAAGCGTCATCTCTGTCTAGCTTTAGTGAGAAGGGTATGATGTCAAACACTTTAAAATTAGCAAAACACCAAAAATGCCCCCT AACTCAAATTTGAAACTAAAAAGGGTCTAAATTATTTTCTAAAAAGAGGGGACCCAAGGAATCATGTATAAAGAATTCACATGTGGTTAATTAGTTTTTT GTTACATGCTTATGGTATTACAACCATGTAATGTAATCAATGGTCCTTTTGCATGAATTAATTGTTTAGTCCTTTCTCTGTTCCCTCTTCATGTAACAGC TCATGATCTTTTCCTGGGTCATACATGAACTAATACAAAGTTGATATTAAATTTTTATGCTAGCTTACTTTTTGTCTAGCCTGTGGTACCTTTTGTGTCT CCCAACAAACTCCGAATCAGAGGAAAAGTGATAAGTCACTCAATTCTTTAACTTCGACATGTTCAAATCATGCAATGTATTCTATGAGATATTTCATAGT TGTTCTCCCTCTTAGATTAGTTCACCAAATTGGGCTGTTTTCGAATTTTTAATTTATTAATTGCTTTTCTTTGATTTGTAGGTTCCATTGTTTGAGAGTA TGGATGAAAGATTGCTCGATGCCATATGTGAGAGACTGAAGCCATGTCTATTTACAGACAAAACTTACATTGTTCGGGAAGGAGATCCAGTTGATGAGAT GCTTTTCATCATACGCGGTCGTCTTGAGAGTGTTACCACAGATGGCGGGAGGAGTGGATTTTTTAATCGCAGTTATTTGAAAGAGGCCGACTTCTGCGGT GAGGAGCTTTTAACATGGGCATTGGATCCCAAATCTGGGTCAAACCTCCCATCTTCTACTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_59853; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_202871
| Blastp | Probable cyclic nucleotide-gated ion channel 5 from Arabidopsis with 74.65% of identity |
|---|---|
| Blastx | Probable cyclic nucleotide-gated ion channel 5 from Arabidopsis with 74.19% of identity |
| Eggnog | Potassium voltage-gated channel, subfamily H (Eag-related), member(ENOG410XPSE) |
| Kegg | Link to kegg annotations (AT5G57940) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432542.1) |
| Pfam | Ion transport protein (PF00520.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |