| Id Trinity | FTRINITY_DN56428_c1_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_202404 |
| Sequence | CCTATGGCTCCTTAAACCTCCCACAAAGGTCTATAAATTAAGTGGCACCCCTTATCATTATTCTTCACATTTCCACTTTACATTACCTCTCACTAGTTCA AGTCCAACATTGAAACTTCAATTTCAAAGTAATTGCCTCTTATTTCATTATTTCAAGTACAAATTACGTGCACATTTTTCAGCTAAATAATTGACTATAT TTAATTTTGGATGTGCAGGAAAAAATGGCTCTCGTTGGTTTAGTCTTGGTTAGCCTTCTCTCAATGTTCTCATCTGCCTATGGCTATGGAGGGTGGGTTA ATGCACATGCAACCTTCTATGGAGGGAGTGATGCATCAGGGACAATGGGTACTAAGCATTTTGATACATTTTATGAAATAAAGTTTTTGTTAGAGAAACC TACTTATGTGTGGTTATTAATGATATAATATAGTCTGTTTTTAGAATAGATAAAAGGTGAACATTGTGTTAAGCGGTCCATATCGAAAATAATTGAATTT CTATGATAAGGAAACCCATTAGACTAACTTATTTGTTCTAATGGAATGTTTTTAGGCGGTGCTTGTGGATATGGGAACCTATACAGTCAGGGCTATGGAA CAAACACTGCTGCTTTGAGCACTGCTTTGTTCAACAATGGCTTAAGTTGTGGCTCTTGCTATGAGATTAGGTGTGTTAGTGACCGTAAGTGGTGTTTGCC TGGGTCAATTTTGGTCACTGCAACCAATTTCTGTCCACCAAACAATGCCTTGCCTAATAATGCTGGAGGATGGTGTAATCCTCCTCAGCATCACTTTGAT CTTGCTCAGCCTGTCTTCCTTCGCATTGCCCAATATAGAGCTGGAATTGTGCCTGTTTCTTACAGAAGGGTTGCCTGCAGAAGAAGGGGAGGAATTAGGT TCACAATCAATGGTCACTCCTACTTCAACCTAGTCCTCATCACAAATGTGGGTGGTGCTGGTGATGTGCATGCTGTGGCCATCAAAGGTTCCAGAACAGG ATGGTCTTCAATGTCAAGAAACTGGGGTCAGAACTGGCAGAACAACAACTATCTCAATGGCCAAACCTTGTCCTTCAAGGTTACCACAAGTGATGCCCGT ACTATTGTCTCTTACAATGTTGCTCCACCTGGTTGGTCCTTTGGACAAACATACACTGGTGCCCAATTCCGCTAGAAATGCTATATCCAAAGTTTCAATT CATAAATTTCCATACATTTCATTATATAGTTTGTTACAATTTCTCATTCCAAATTTAAGTGTTAGTATTAGTATGACTCTAGTATACTAAGGTATTAGAT AGTATGCTACTTGTTAAGGGGTGTCTAGAAAGCGGGAATGGCCTATTTTAATCTAGCTCTTCATTGTGTTTATTTGATTGTGTTAATGGGGAGGGTCCTA TTTTTTATGGCCTTCTTCAATGTTGGGGTCTCTTTTGTATAATCTTTGAATGATTTTAGAAACTTCTGCTGGTTAAAAGAAGCTGGTAGAGGTGAGCTTT TTATATGTAAACTACTAAGTAGGAAGAGGTGGACAATTGAACCACCCGCCATTAGTACTGGAATGGTATTATTTTCTCCATCTTTTTGGGAGTGTTGGAA TCATTGTTTGCTTCCCAAATTGTTGTAAGCAGCATTGGCTTGATGTCTTTGGTTGTATTATTTACTTATTAGAGACTAAAAGTGTAAATTTTCTTATTTC TGCCTGTAATGGAAATGAATTTACTGGTACTCTTGCTATCTCAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_60086; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_202404
| Blastp | Expansin-A1 from Arabidopsis with 85.99% of identity |
|---|---|
| Blastx | Expansin-A1 from Arabidopsis with 85.99% of identity |
| Eggnog | loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found(ENOG410YCRV) |
| Kegg | Link to kegg annotations (AT1G69530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003518007.1) |
| Pfam | Lytic transglycolase (PF03330.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |