Id Trinity | FTRINITY_DN56460_c0_g2_i22 |
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Name Transcript | Ll_transcript_200362 |
Sequence | GGAAAAAACTTTACTCTTCAAAGAAATTTATCATAGCATGCTTTTGATATATTACTATGTTGACTAGTCCCAACAAAACACTCCTCTTTCTTTTCCATGC TGTACCCTCTAATAATCCATGTTAGGAAACATTGTGGTACACATTTTTGTTTAGTTGCTACCCTCCCTAGTTGTTTCTAACCAAAACTTATTAGCTATAA TTGCTTATTCTGCTTTTCTATACTTTCTAACATTCTTGCATGAAACTACTAAAGTATTATTCACTTTCCAGCTTCACATGTCAATGCATGTATATGCTTG TTTCTGATTTTAGGCCACCATATATGTGACCTCACTTCTAATATTGGTGCTTCTGCTTCAACCACTTTCTTCAGCTTGTAAAGTTACTTCAAGCTTATGC AGCTTTTCCACTTGTGAATACTTTTCTGCTCATTCAAGTAGCATCAATAATATGTTCCCTGGGTATGTTTTCTTCTTTCTTTACTTTTTAAACTCTTTAG GCTTTTCCAATGCATTTTTTGGCTTAATTTTGCTAGCATAGGGAGATAACTAGGGGCTAGAGAGAAATCTGATTAAAGTATTATGTTTGACTTATTACTC TACAACAAGTTAAAGCTTAAAAGTGCTTTTTTTTTCATTCTGTTATAAAGATGAATAGCACTTTTGTCAGATATATAAAAAAACAATTTTGAGAAAAGCA GCAGAATGAAGGTTTTGCTTATAAAAATCAAAGAGAAAAGGAACAAAAAGAAAATGATAAAACCTTCAAGTGGAGGGTGAGATGAGGGTAATAACTAGTA GAGAACTTCTTGAATTCTTGAAGAGAATGTTCACATAATTGATATTACCTATGAACTTTCTGAATTTTGTTTATGATCATAGACTTGTGATCTGTGAGGG ATACCTCCAAGAAAAAAGTGCCTTATAACTATAAGGACTTTGATGCTATCAGTCTTATTTGGAAGAAAAACATGAAAGTCTTTTCTTCTGTCTTGTTGAA AGTAATAGGTGTGCCACAAAAACTGTTTTTTGCTTTATCAACCACATTTGTCTGTGAAAGCAAAGACCAAGTTGCATGTCAGATTTGAACAAATGAATGT TACATAATAGGTTTGAAACAAATCTCATAAAAAACATGTCTAGTGTGTTGTTTTTATGAAACTAATGTGGATCTCTTTCAGTAATCACATGAATAAAATT TGGAAGAAAAGAGAGACAAAGGAAGAAAGATGAAAAGTTTGCTTTCACAATTCATGGTTTTGATGGAGAGTGAGATGCTTGAGAAGACCACACTTTAGCA TAGGACCACTGCAAGACAATTTTAAGTTTCTAATGAAAAAAAGTGTACATTAGTTCATATATCAAAGTTCATTGAACACAGAGAAAGTGACTTAACAAAA GTAACCTCACACAATTTTTTAATTTCTATTAGGAAGCTTTTGCTCAAAGACTAGCTCTTTGCTTAGTGCACTACTTTCTCTAGGATTTCCATGTCATTTT AGTAGCATAGTCATGTATCCTTATCCTATATATGACACTAGAAGTATCTTATAAGAAATTGGATAAGCAAAAAACTGCACAAGATTATAAGAATTTGACA CAACATATTGAGTTAAACCCCTAAAGCATTGGGTTTACGGGTCGTTTTCCATTTATAAAGCATTCAATTTGTTTACTCATTTCCAATGTGAGGCTTTTTC ATCCGCATCTTACACACTTGAATACCAACATTTTTTTATCTAACTGTGAGCAAGACTTCAATAGTTTTCTATCTCATTTAAGAGTTGATTTCCAAGGTCC ATTAGTCAAGGTAGATATTGTATGTTTATGCATGCTTAGTCCATCTTCTGCAACTATTGCTGTTTTCTGCATTATACTTTAGTGTAGTTTTTTATTATCT TTATCCTTTTGGCCAAACAACATTGAAGAAATTATGAGTAGCAAAACATTCTAATTCATGCAATAGTATAAATACTGTTTAAATCATGCTTCTGCTTTAT CGAAGAAAGAAATATATTCATTGTTAATAGAGTTTGGTACAAAAGCCTTATGAATATGAGAAATTCTAGTAAAGGTACTGTATTGAACAGTTGACAAGTA TAAAATATATTCTTCAGAATGATAGTTGCATTTTTGACATGGCCTGCACTACCTTACCCAAGTTTAATATTATGTATTATGGATTGCCACATAAAAAAAT CACTATGATCATTTGGATAATTTTCCGAATGGAAATATATAATTTAAGGCTAAAGCACTAATGTGGAGGTTTGGTTATCCTGTGATCAAATCACCTAAGA TACTTAGTGCCACTTAAACTGTCTGTGAAAATCATATGCTATCAACTATTAAGGTTAGGAACATAAGAAACTTCATTTCTAACCAATGTCAAATGGAATT TGCACTGTCATAACAGCAGAAAATGCATGTCTTTATGTAGAAAAATGGTATAGAATATTGTTATTAGCATTTACCATTATCAGTTTCCATGTCCTTTTCT AACTTTTATTTTACTTTCCAAAAAAATTGTAACAAAACAATATATATGAGTTATGTTTCATCACTCATTAGTTCTCAATTTCTCATGTTCTTCAGTTTCT TGTTACATGTCAGAACCTGAAACATGTAAGTCAGTGAAAGTTACATGCAATTACATAATTTCAATTAGTTACACCAACTTATTCCAGTTTAGAAGTTTGA ACTAACTTCCAAAAGGTACTAGAGTAGAGACAAATTTACATCATTGCATGGCATCTAGCATTACTCTCTATGCAGTTAATTACTATTCTGCAGATTCTTT CTCAGTCCATGATGGCAGAAACTCTAATTTGTTATTTTTATTTTTCCTATGAATTGAAAGGCTTTCAGATTTATATGTTGCAAACCAATGAGGTTGGAGG AGTCCTTGTTTTGAGAGTTGAGGCTTTGAAGTAGAGGTTTTTCTTGATCATTGGGCTATAAATAAATAACAAATAAATATGAAGTTCATGAAACTTGGTA CAAGGCCAGATATTTTCTACACTGAACAAGCTACCAGAACTGTGGTTTCAGATTTACCTATAGACCTTGTGATAAAAATCGACGATATTACTTATCTGCT ACACAAGGTATTGGAATTATATTGAGTGTTGAAATAAAATCAAAATTTAGTATAGGTTCATCTATAATTCTTCTTTTATTAGCTGCAGTCTCCACTTCTT TCAAAATGTGGCCTTCTACAAAGACTTTGCTCTGATTCAAGGGATTCCGAGAGTGTTTCTATAGAGCTTCATGATTTGCCTGGAGGGGCAGATGCTTTTG AACTATGTGCTAAGTTCTGCTATGGAATTTCAATCAATATTAGTGCACATAACATTGTATCCGCACTGTGTTCCGCTAAGTTCCTCCAAATGAATGATTC CACTGAGAAGGGAAACTTTGTAGGGAAACTTGAGGCTTTCTTCAGTTCATGCATTCTTGAAGGTTGGAAGGACTCAATTGTAACACTGCAGACCACTGAT AAGTTACCAGAATGGCCTGAGAATCTTGGCATAACAAGAAAGTGCATTGATTCGATTGTTGAGAAAGTTCTTACACCCCCATCACAGGTTAGATGGTCCT ACACCTACACTAGGCCTGGTTATACACAAAAAAAGCATCATTCTGTCCCAAAGGATTGGTGGACTGAGGATGTGTGTGATCTTAATATAGATCTTTTCAG GTGCATCATAATGGCTATTAGATCAACATATGTGCTCCCACCACAGCTTATTGGTGAGGCTTTGCATGTCTATGCCTATAAGATGTTACCCGGTGTCACA AAGCTTAAAAGTTCGGGAACTTCAGCATCATCACAAACAGAAGAATCTGAGAAAAATAGAAAAATTCTTGAAACAATTGTAAGCATGATTCCTGAAGACA GAGGGTCAGTTTCAGTTGGCTTCTTGTTAAGACTTCTCAGCATTTCAAGCCATCTTGGAGTCTCTCCGGTGACGAAAACTGAACTAATAAAGAGAGCCAG CATACAGTTTGATGAGGCAACAGTGAGTGACTTGCTTTATGACCATATATTTTATGCAGATTTAGTTGTAGCTGTATTGGAAAGTTTCTTGAAGCTTTGG AAAAGGATGTTCTTTGGTGCAGTGGATAACAGGAACTTTTTAAGATCAATTAGAAATGTTGGCAAGCTCATTGATTCCTATCTTCAAGAGGTTGCAAGGG ATGATAACATGCCAGTGTCAAAGTTTGTAGCTCTTTCGGAAACTGTACCAGCAATCGGCCGATTAGAGCATGATGATCTGTACCAGGCAATTGACATCTA TCTTAAGGTGCATCCTGACCTTAGCAAGGCTGACAAGAAGCGCGTGTGTCAGATTCTAGACTGCCGAAGACTGTCTCCAGAAGCGCGTGCACATGCAGTC AAAAATGATCTTCTTCCGTTAAGAACAGTGGTGCAGCTCCTCTACTTTGAACAAGAGAAAGGCTCTAAGGTAACAACCACTAGCCACAAGCTGCAAAAAC CACATGAGCTAGTTAAAAAGAGACCAGCAACAAGAGATAGCCACGGTAAGCAATCTTCGCGCCTAGACAAAGAAGAACTCAACAGAGAAGGAAAAGCACT GACAAGAAGAACCTCTCTTAATGAAAGTAGAGAAAAGGATAAACACAAAACTAAAAGATCAGAGGATAAGTTGGCATTGGAGTTAGAAAGAAAGATGGTT ATTAGAGGAAACATTGAAAAGAAAGGGTCAGAAAAGGTAAGGGGAGCCAAAGAAGAAAGTAACTTGGATCCTAAGAAAATCATGCAAAGGGTAAGAAGTA ATAAATGAAAACATGGCCATGCATATAGAGATACAATAATAGTAGTAATAATCTTTGAACAATTCAGAGAAAATTTCATCATTCCTATATGTGTACTTTG TAATCTCAATTCTTAGTTCTTTTTACATGTGTCATAAAATGTAAGCAATGTATGATACTTTGCACTTTCTGTTTCTCTTAAAAAGAGTTGTATTTAACAT TATGAAAGAGGTCATTGCAGAAATGGAGTTGAATTCATATATGGATACAATGATACAATTTCATCACATTTCCCC BLAST |
Tissue | flowers |
Gene name | LI_gene_60344; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_200362
Blastp | BTB/POZ domain-containing protein At5g47800 from Arabidopsis with 54.25% of identity |
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Blastx | BTB/POZ domain-containing protein At5g47800 from Arabidopsis with 52.23% of identity |
Eggnog | BTB POZ domain-containing protein(ENOG410YFNP) |
Kegg | Link to kegg annotations (AT5G47800) |
CantataDB | Link to cantataDB annotations (CNT0000005) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019420034.1) |
Pfam | NPH3 family (PF03000.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |