Id Trinity | FTRINITY_DN56460_c0_g2_i23 |
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Name Transcript | Ll_transcript_200363 |
Sequence | GGAAAAAACTTTACTCTTCAAAGAAATTTATCATAGCATGCTTTTGATATATTACTATGTTGACTAGTCCCAACAAAACACTCCTCTTTCTTTTCCATGC TGTACCCTCTAATAATCCATGTTAGGAAACATTGTGCTTCACATGTCAATGCATGTATATGCTTGTTTCTGATTTTAGGCCACCATATATGTGACCTCAC TTCTAATATTGGTGCTTCTGCTTCAACCACTTTCTTCAGCTTGTAAAGTTACTTCAAGCTTATGCAGCTTTTCCACTTGTGAATACTTTTCTGCTCATTC AAGTAGCATCAATAATATGTTCCCTGGGTATGTTTTCTTCTTTCTTTACTTTTTAAACTCTTTAGGCTTTTCCAATGCATTTTTTGGCTTAATTTTGCTA GCATAGGGAGATAACTAGGGGCTAGAGAGAAATCTGATTAAAGTATTATGTTTGACTTATTACTCTACAACAAGTTAAAGCTTAAAAGTGCTTTTTTTTT CATTCTGTTATAAAGATGAATAGCACTTTTGTCAGATATATAAAAAAACAATTTTGAGAAAAGCAGCAGAATGAAGGTTTTGCTTATAAAAATCAAAGAG AAAAGGAACAAAAAGAAAATGATAAAACCTTCAAGTGGAGGGTGAGATGAGGGTAATAACTAGTAGAGAACTTCTTGAATTCTTGAAGAGAATGTTCACA TAATTGATATTACCTATGAACTTTCTGAATTTTGTTTATGATCATAGACTTGTGATCTGTGAGGGATACCTCCAAGAAAAAAGTGCCTTATAACTATAAG GACTTTGATGCTATCAGTCTTATTTGGAAGAAAAACATGAAAGTCTTTTCTTCTGTCTTGTTGAAAGTAATAGGTGTGCCACAAAAACTGTTTTTTGCTT TATCAACCACATTTGTCTGTGAAAGCAAAGACCAAGTTGCATGTCAGATTTGAACAAATGAATGTTACATAATAGGTTTGAAACAAATCTCATAAAAAAC ATGTCTAGTGTGTTGTTTTTATGAAACTAATGTGGATCTCTTTCAGTAATCACATGAATAAAATTTGGAAGAAAAGAGAGACAAAGGAAGAAAGATGAAA AGTTTGCTTTCACAATTCATGGTTTTGATGGAGAGTGAGATGCTTGAGAAGACCACACTTTAGCATAGGACCACTGCAAGACAATTTTAAGTTTCTAATG AAAAAAAGTGTACATTAGTTCATATATCAAAGTTCATTGAACACAGAGAAAGTGACTTAACAAAAGTAACCTCACACAATTTTTTAATTTCTATTAGGAA GCTTTTGCTCAAAGACTAGCTCTTTGCTTAGTGCACTACTTTCTCTAGGATTTCCATGTCATTTTAGTAGCATAGTCATGTATCCTTATCCTATATATGA CACTAGAAGTATCTTATAAGAAATTGGATAAGCAAAAAACTGCACAAGATTATAAGAATTTGACACAACATATTGAGTTAAACCCCTAAAGCATTGGGTT TACGGGTCGTTTTCCATTTATAAAGCATTCAATTTGTTTACTCATTTCCAATGTGAGGCTTTTTCATCCGCATCTTACACACTTGAATACCAACATTTTT TTATCTAACTGTGAGCAAGACTTCAATAGTTTTCTATCTCATTTAAGAGTTGATTTCCAAGGTCCATTAGTCAAGGTAGATATTGTATGTTTATGCATGC TTAGTCCATCTTCTGCAACTATTGCTGTTTTCTGCATTATACTTTAGTGTAGTTTTTTATTATCTTTATCCTTTTGGCCAAACAACATTGAAGAAATTAT GAGTAGCAAAACATTCTAATTCATGCAATAGTATAAATACTGTTTAAATCATGCTTCTGCTTTATCGAAGAAAGAAATATATTCATTGTTAATAGAGTTT GGTACAAAAGCCTTATGAATATGAGAAATTCTAGTAAAGGTACTGTATTGAACAGTTGACAAGTATAAAATATATTCTTCAGAATGATAGTTGCATTTTT GACATGGCCTGCACTACCTTACCCAAGTTTAATATTATGTATTATGGATTGCCACATAAAAAAATCACTATGATCATTTGGATAATTTTCCGAATGGAAA TATATAATTTAAGGCTAAAGCACTAATGTGGAGGTTTGGTTATCCTGTGATCAAATCACCTAAGATACTTAGTGCCACTTAAACTGTCTGTGAAAATCAT ATGCTATCAACTATTAAGGTTAGGAACATAAGAAACTTCATTTCTAACCAATGTCAAATGGAATTTGCACTGTCATAACAGCAGAAAATGCATGTCTTTA TGTAGAAAAATGGTATAGAATATTGTTATTAGCATTTACCATTATCAGTTTCCATGTCCTTTTCTAACTTTTATTTTACTTTCCAAAAAAATTGTAACAA AACAATATATATGAGTTATGTTTCATCACTCATTAGTTCTCAATTTCTCATGTTCTTCAGTTTCTTGTTACATGTCAGAACCTGAAACATGTAAGTCAGT GAAAGTTACATGCAATTACATAATTTCAATTAGTTACACCAACTTATTCCAGTTTAGAAGTTTGAACTAACTTCCAAAAGGTACTAGAGTAGAGACAAAT TTACATCATTGCATGGCATCTAGCATTACTCTCTATGCAGTTAATTACTATTCTGCAGATTCTTTCTCAGTCCATGATGGCAGAAACTCTAATTTGTTAT TTTTATTTTTCCTATGAATTGAAAGGCTTTCAGATTTATATGTTGCAAACCAATGAGGTTGGAGGAGTCCTTGTTTTGAGAGTTGAGGCTTTGAAGTAGA GGTTTTTCTTGATCATTGGGCTATAAATAAATAACAAATAAATATGAAGTTCATGAAACTTGGTACAAGGCCAGATATTTTCTACACTGAACAAGCTACC AGAACTGTGGTTTCAGATTTACCTATAGACCTTGTGATAAAAATCGACGATATTACTTATCTGCTACACAAGTCTCCACTTCTTTCAAAATGTGGCCTTC TACAAAGACTTTGCTCTGATTCAAGGGATTCCGAGAGTGTTTCTATAGAGCTTCATGATTTGCCTGGAGGGGCAGATGCTTTTGAACTATGTGCTAAGTT CTGCTATGGAATTTCAATCAATATTAGTGCACATAACATTGTATCCGCACTGTGTTCCGCTAAGTTCCTCCAAATGAATGATTCCACTGAGAAGGGAAAC TTTGTAGGGAAACTTGAGGCTTTCTTCAGTTCATGCATTCTTGAAGGTTGGAAGGACTCAATTGTAACACTGCAGACCACTGATAAGTTACCAGAATGGC CTGAGAATCTTGGCATAACAAGAAAGTGCATTGATTCGATTGTTGAGAAAGTTCTTACACCCCCATCACAGGTTAGATGGTCCTACACCTACACTAGGCC TGGTTATACACAAAAAAAGCATCATTCTGTCCCAAAGGATTGGTGGACTGAGGATGTGTGTGATCTTAATATAGATCTTTTCAGGTGCATCATAATGGCT ATTAGATCAACATATGTGCTCCCACCACAGCTTATTGGTGAGGCTTTGCATGTCTATGCCTATAAGATGTTACCCGGTGTCACAAAGCTTAAAAGTTCGG GAACTTCAGCATCATCACAAACAGAAGAATCTGAGAAAAATAGAAAAATTCTTGAAACAATTGTAAGCATGATTCCTGCAGATAGAGGGTCAGTTTCGGT TGGCTTCTTGTTAAGACTTCTCAGCATTTCAGATCATGTCAGTGTCTCTCCGGTGACCAAAACAGAACTAATAAAGAGAGCCAGCATACAGTTTGATGAG GCAACAATGAAGGACTTGCTTTACGATCAGAATGTTTATGATATCGATTTAGTTCAAGCAGTATCGGAAAGTTTCTTGAAGCTTTGGAAAAGAATGTTCT CTGGTGCAGTGGATAACAGGAACTTTTTGAGATCAATTAGAAATGTTGGCAAGCTCATTGATTCTTACCTTCAAGTGGTGGCAAGGGATGATAATATGCC AGTGTCGAAGTTTGTAGCTCTTGCTGAAACTGTGCCCGCAATTGGTCGATTAGAGCATGATGATCTGTACCAGGCAATTAACTTCTATCTTAAGGTACAT CCTGACCTTAGCAAGGCTGATAAGAAGCGCTTGTGTCAGATTCTAGACTGCCAAAGACTATCCCCGGAAGTGCGTGCGCATGCAGTAAAAAATGATCTTC TACCATTAAGAACAGTGGTGCAACTTCTCTACTTTGAACAAGAGAAAAGCTCTAAGGTAACAACCACTAGCCACAAGCTGCAAAAACCACATGAGCTAGT TAAAAAGACACCAGCAACAGAAGATAGCCTTGGTAAGCAAACCTTAGACCAAGAAAAAGAAGAACTCAATAGAGAAGAAGTACTCACAAGAAGAACCTCT CTTAATGAAAGCAGAGAAAAGGGTACACAGAAAACAAAAAGATCAGATGGTAAGTTAGCATTGGAGTTAGAAAAAAAGATGGTTATAAGAGGAGACAGTG AAGAGAAAAGGACAGAAAAGGGAAGTGGAGTGAAAGAAGAAGGTAACTTGGATCCTAAGAAAACTATACAAAGGGTAAGAAGTAATAAATCTGAACATGG CCGTGAAAAGGGAAGATAGATATAATAGTAGTAATAATAATCTTTGAAGAATTCAAAGAAAATCTCATTATTCCTATGTCTACTTTGTAACCTTAATTCT TATGATTTCTATTTTATATGTCATAAATGTAAGTAGTGTATGATCCTTTGTACTTGATTGTTTTCTGTGAAAGGTTGTATTTATCACTATCAAATAAGAC CATGCACAAATGCAGTTTAATTTGATGGAGTATAGGCTGCATATATCTACTTCGATTGTAATGTTTCTTTATCTTTATTCAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_60344; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_200363
Blastp | BTB/POZ domain-containing protein At5g47800 from Arabidopsis with 56.56% of identity |
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Blastx | BTB/POZ domain-containing protein At5g47800 from Arabidopsis with 56.56% of identity |
Eggnog | BTB POZ domain-containing protein(ENOG410YFNP) |
Kegg | Link to kegg annotations (AT5G47800) |
CantataDB | Link to cantataDB annotations (CNT0000005) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019420040.1) |
Pfam | NPH3 family (PF03000.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |