| Id Trinity | FTRINITY_DN56460_c0_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_200336 |
| Sequence | GGAAAAAACTTTACTCTTCAAAGAAATTTATCATAGCATGCTTTTGATATATTACTATGTTGACTAGTCCCAACAAAACACTCCTCTTTCTTTTCCATGC TGTACCCTCTAATAATCCATGTTAGGAAACATTGTGCTTCACATGTCAATGCATGTATATGCTTGTTTCTGATTTTAGGCCACCATATATGTGACCTCAC TTCTAATATTGGTGCTTCTGCTTCAACCACTTTCTTCAGCTTGTAAAGTTACTTCAAGCTTATGCAGCTTTTCCACTTGTGAATACTTTTCTGCTCATTC AAGTAGCATCAATAATATGTTCCCTGGGTATGTTTTCTTCTTTCTTTACTTTTTAAACTCTTTAGGCTTTTCCAATGCATTTTTTGGCTTAATTTTGCTA GCATAGGGAGATAACTAGGGGCTAGAGAGAAATCTGATTAAAGTATTATGTTTGACTTATTACTCTACAACAAGTTAAAGCTTAAAAGTGCTTTTTTTTT CATTCTGTTATAAAGATGAATAGCACTTTTGTCAGATATATAAAAAAACAATTTTGAGAAAAGCAGCAGAATGAAGGTTTTGCTTATAAAAATCAAAGAG AAAAGGAACAAAAAGAAAATGATAAAACCTTCAAGTGGAGGGTGAGATGAGGGTAATAACTAGTAGAGAACTTCTTGAATTCTTGAAGAGAATGTTCACA TAATTGATATTACCTATGAACTTTCTGAATTTTGTTTATGATCATAGACTTGTGATCTGTGAGGGATACCTCCAAGAAAAAAGTGCCTTATAACTATAAG GACTTTGATGCTATCAGTCTTATTTGGAAGAAAAACATGAAAGTCTTTTCTTCTGTCTTGTTGAAAGTAATAGGTGTGCCACAAAAACTGTTTTTTGCTT TATCAACCACATTTGTCTGTGAAAGCAAAGACCAAGTTGCATGTCAGATTTGAACAAATGAATGTTACATAATAGGTTTGAAACAAATCTCATAAAAAAC ATGTCTAGTGTGTTGTTTTTATGAAACTAATGTGGATCTCTTTCAGTAATCACATGAATAAAATTTGGAAGAAAAGAGAGACAAAGGAAGAAAGATGAAA AGTTTGCTTTCACAATTCATGGTTTTGATGGAGAGTGAGATGCTTGAGAAGACCACACTTTAGCATAGGACCACTGCAAGACAATTTTAAGTTTCTAATG AAAAAAAGTGTACATTAGTTCATATATCAAAGTTCATTGAACACAGAGAAAGTGACTTAACAAAAGTAACCTCACACAATTTTTTAATTTCTATTAGGAA GCTTTTGCTCAAAGACTAGCTCTTTGCTTAGTGCACTACTTTCTCTAGGATTTCCATGTCATTTTAGTAGCATAGTCATGTATCCTTATCCTATATATGA CACTAGAAGTATCTTATAAGAAATTGGATAAGCAAAAAACTGCACAAGATTATAAGAATTTGACACAACATATTGAGTTAAACCCCTAAAGCATTGGGTT TACGGGTCGTTTTCCATTTATAAAGCATTCAATTTGTTTACTCATTTCCAATGTGAGGCTTTTTCATCCGCATCTTACACACTTGAATACCAACATTTTT TTATCTAACTGTGAGCAAGACTTCAATAGTTTTCTATCTCATTTAAGAGTTGATTTCCAAGGTCCATTAGTCAAGGTAGATATTGTATGTTTATGCATGC TTAGTCCATCTTCTGCAACTATTGCTGTTTTCTGCATTATACTTTAGTGTAGTTTTTTATTATCTTTATCCTTTTGGCCAAACAACATTGAAGAAATTAT GAGTAGCAAAACATTCTAATTCATGCAATAGTATAAATACTGTTTAAATCATGCTTCTGCTTTATCGAAGAAAGAAATATATTCATTGTTAATAGAGTTT GGTACAAAAGCCTTATGAATATGAGAAATTCTAGTAAAGGTACTGTATTGAACAGTTGACAAGTATAAAATATATTCTTCAGAATGATAGTTGCATTTTT GACATGGCCTGCACTACCTTACCCAAGTTTAATATTATGTATTATGGATTGCCACATAAAAAAATCACTATGATCATTTGGATAATTTTCCGAATGGAAA TATATAATTTAAGGCTAAAGCACTAATGTGGAGGTTTGGTTATCCTGTGATCAAATCACCTAAGATACTTAGTGCCACTTAAACTGTCTGTGAAAATCAT ATGCTATCAACTATTAAGGTTAGGAACATAAGAAACTTCATTTCTAACCAATGTCAAATGGAATTTGCACTGTCATAACAGCAGAAAATGCATGTCTTTA TGTAGAAAAATGGTATAGAATATTGTTATTAGCATTTACCATTATCAGTTTCCATGTCCTTTTCTAACTTTTATTTTACTTTCCAAAAAAATTGTAACAA AACAATATATATGAGTTATGTTTCATCACTCATTAGTTCTCAATTTCTCATGTTCTTCAGTTTCTTGTTACATGTCAGAACCTGAAACATGTAAGTCAGT GAAAGTTACATGCAATTACATAATTTCAATTAGTTACACCAACTTATTCCAGTTTAGAAGTTTGAACTAACTTCCAAAAGGTACTAGAGTAGAGACAAAT TTACATCATTGCATGGCATCTAGCATTACTCTCTATGCAGTTAATTACTATTCTGCAGATTCTTTCTCAGTCCATGATGGCAGAAACTCTAATTTGTTAT TTTTATTTTTCCTATGAATTGAAAGGCTTTCAGATTTATATGTTGCAAACCAATGAGGTTGGAGGAGTCCTTGTTTTGAGAGTTGAGGCTTTGAAGTAGA GGTTTTTCTTGATCATTGGGCTATAAATAAATAACAAATAAATATGAAGTTCATGAAACTTGGTACAAGGCCAGATATTTTCTACACTGAACAAGCTACC AGAACTGTGGTTTCAGATTTACCTATAGACCTTGTGATAAAAATCGACGATATTACTTATCTGCTACACAAGTCTCCACTTCTTTCAAAATGTGGCCTTC TACAAAGACTTTGCTCTGATTCAAGGGATTCCGAGAGTGTTTCTATAGAGCTTCATGATTTGCCTGGAGGGGCAGATGCTTTTGAACTATGTGCTAAGTT CTGCTATGGAATTTCAATCAATATTAGTGCACATAACATTGTATCCGCACTGTGTTCCGCTAAGTTCCTCCAAATGAATGATTCCACTGAGAAGGGAAAC TTTGTAGGGAAACTTGAGGCTTTCTTCAGTTCATGCATTCTTGAAGGTTGGAAGGACTCAATTGTAACACTGCAGACCACTGATAAGTTACCAGAATGGC CTGAGAATCTTGGCATAACAAGAAAGTGCATTGATTCGATTGTTGAGAAAGTTCTTACACCCCCATCACAGGTTAGATGGTCCTACACCTACACTAGGCC TGGTTATACACAAAAAAAGCATCATTCTGTCCCAAAGGATTGGTGGACTGAGGATGTGTGTGATCTTAATATAGATCTTTTCAGGTGCATCATAATGGCT ATTAGATCAACATATGTGCTCCCACCACAGCTTATTGGTGAGGCTTTGCATGTCTATGCCTATAAGATGTTACCCGGTGTCACAAAGCTTAAAAGTTCGG GAACTTCAGCATCATCACAAACAGAAGAATCTGAGAAAAATAGAAAAATTCTTGAAACAATTGTAAGCATGATTCCTGAAGACAGAGGGTCAGTTTCAGT TGGCTTCTTGTTAAGACTTCTCAGCATTTCAAGCCATCTTGGAGTCTCTCCGGTGACGAAAACTGAACTAATAAAGAGAGCCAGCATACAGTTTGATGAG GCAACAGTGAGTGACTTGCTTTATGACCATATATTTTATGCAGATTTAGTTGTAGCTGTATTGGAAAGTTTCTTGAAGCTTTGGAAAAGGATGTTCTTTG GTGCAGTGGATAACAGGAACTTTTTAAGATCAATTAGAAATGTTGGCAAGCTCATTGATTCCTATCTTCAAGAGGTTGCAAGGGATGATAACATGCCAGT GTCAAAGTTTGTAGCTCTTTCGGAAACTGTACCAGCAATCGGCCGATTAGAGCATGATGATCTGTACCAGGCAATTGACATCTATCTTAAGGTGCATCCT GACCTTAGCAAGGCTGACAAGAAGCGCGTGTGTCAGATTCTAGACTGCCGAAGACTGTCTCCAGAAGCGCGTGCACATGCAGTCAAAAATGATCTTCTTC CGTTAAGAACAGTGGTGCAGCTCCTCTACTTTGAACAAGAGAAAGGCTCTAAGGTAACAACCACTAGCCACAAGCTGCAAAAACCACATGAGCTAGTTAA AAAGAGACCAGCAACAAGAGATAGCCACGGTAAGCAATCTTCGCGCCTAGACAAAGAAGAACTCAACAGAGAAGGAAAAGCACTGACAAGAAGAACCTCT CTTAATGAAAGTAGAGAAAAGGATAAACACAAAACTAAAAGATCAGAGGATAAGTTGGCATTGGAGTTAGAAAGAAAGATGGTTATTAGAGGAAACATTG AAAAGAAAGGGTCAGAAAAGGTAAGGGGAGCCAAAGAAGAAAGTAACTTGGATCCTAAGAAAATCATGCAAAGGGTAAGAAGTAATAAATGAAAACATGG CCATGCATATAGAGATACAATAATAGTAGTAATAATCTTTGAACAATTCAGAGAAAATTTCATCATTCCTATATGTGTACTTTGTAATCTCAATTCTTAG TTCTTTTTACATGTGTCATAAAATGTAAGCAATGTATGATACTTTGCACTTTCTGTTTCTCTTAAAAAGAGTTGTATTTAACATTATGAAAGAGGTCATT GCAGAAATGGAGTTGAATTCATATATGGATACAATGATACAATTTCATCACATTTCCCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_60344; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_200336
| Blastp | BTB/POZ domain-containing protein At5g47800 from Arabidopsis with 56.24% of identity |
|---|---|
| Blastx | BTB/POZ domain-containing protein At5g47800 from Arabidopsis with 54.58% of identity |
| Eggnog | BTB POZ domain-containing protein(ENOG410YFNP) |
| Kegg | Link to kegg annotations (AT5G47800) |
| CantataDB | Link to cantataDB annotations (CNT0000005) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420040.1) |
| Pfam | NPH3 family (PF03000.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |