Id Trinity | FTRINITY_DN56506_c1_g1_i17 |
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Name Transcript | Ll_transcript_155881 |
Sequence | ACTCACTCTGTCTTCTTAACCAAGCTTTTCGCTCCAGTTCGTTGCCGCTCTCAGCTTTCGCTCCATTTTCTCTCTCTCAAATCAAACCCTAACTCTCGCA AATCTACTTTCTCTCCAGAATTTTCATCCATTGCGTAAAAATTCCATACACCTCACTTGGAAGAAAAAAAATTGAAACTCCACCAGATTCTTCGTGAACG CGCGGTAGTGTTCATTTTTTAGGAGTATTTTCTGCATTTGGTTTCTCACAGTGACACTGTTCTTTGATTTTGATGGGAGAAGAAGTAGTGGTTTGTGTGC TAGCATTAGAAAATGGAAGGAATGAAAACAATGAGGAATCAAGAACAGAATCGAAGCGTGATTACCACCAATACATTGCTGATACAGTTGATGGTAATAC TGAGCCTGACCAGTCTCCAAAAAAGAAACAAGCTAAAGATGATTCCAATGATGAAGTTCGCTCTGATGTTACGAACCCTAAAACTTCTGCAACAGAGAAT GAGTTAACCACCTTTCATGATATCAGTAGCCAACCAAGTGAATCGGTGAAAATTGTTGAGTGTGGAGAACTAACTTCTAATTGTTTGGAGAATTCAAGTT CTTCTGATGAGACATTGAGTGATGAAGCCGACGATCAGAATAATAAGAACAATATTAGTAATACATCTCAGAATGATACGGACACAAGAGACGCGACGAT GTCATGTGTTGTGATGGAAATACCTAAGCATGCTAGTTTATCTGGTATTAGGAAGATTACTTTTAAGTTCAGTAAGAAGAAAGAGGACTATGATGAAGAA TACTTGGCTAAGCCTGATTTAGATTATAATAGCGAGCTGTATGAAAACTCGTGTGGAATGGGATATGTGGGAACCGGAGATATGGACTTCTATACTGCTC GTAATATGGAACTGAAAATGTCGAAGAAGGTTGTCCCCAACTACTACCCTACAAATGTTAAAAAGCTGTTATCAACTGGTATCCTTGACGGAGCTATAGT GAAATATATGTATAATCCTATGAAGGTTGAGCTACGTGGGATTATTGGCGGTGGCGGATACTTGTGTAGCTGTTCGCTGTGCAATTACTCCAGAGTGCTT AGTGCATATGAGTTTGAGCAGCATGCTGGTGCCAAGACTAGACATCCTAACAATCATATATATTTAGAGAATGGAAAGCTGATATACAGCATTATACAGG AAATAAAAGCTGCTCCACTCAGCATATTAGATGAGGTTATAAAGAATGTGGCCGGTTCATCTGTCAATGAGGAGTGCTTCCAGGCTTGGAAAGAAAGCCT TCTAGAAAGCAATGGGAGGGTTCAGGCTTATAAAAATTATAGCGCAAAACTAACTGGGAGGCCTCATAAACACATAAGTCAACCTGTAGAAAGTGTGAGC CACTTGTCTTCTTTGCATGATCCAAGCCATTTTGAGCAGCAAATGTATCTGAAGCGGCCAACTGATGAGTGGAAATATGCGGTGAAGAAAAGCTCCTGCC TGTATAACTCAGGCGTACAATTGAAGAGAAGTGCTGATAGCTGCACTAAGAGAAGGGACAATGATTTACACAGGCTACTTTTTATGCCAAACGGACTGCC AGATGGTGCGGATTTGGCTTACTATGTCAAGGGACAGAAATTACTTGGAGGTTACAAACAGGGGAATGGTATAGTCTGTGGTTGTTGTGACTTAGAGATA AGCCCTTCACAGTTTGAAGCCCATGCTGGAATGGCTGCTAGACGTCAACCTTACCGACACATATATACATCCAATGGATTAACACTCCATGATATAGCTC TCTCCTTGGCAAGTGGTCAAAATCTTACCACAGGAGATAGTGATGATATGTGTGCAATATGTGGAGATGGAGGGGATTTGATTCTTTGCAATGGATGTCC TAGGGCTTTTCATGCAGCCTGCTTGGGTTTTGATTGTGCTCCAGAAAGTAGTTGGCATTGTCTAAACTGTAGAGATAATGTTGGTAATGGAAGAGAATCT TCTATGGCGAGGCCAATCATGATACGGTTGACACAAGTCGATAAAGCTCCAGAGTTTGAAATGGGGGGATGTATTGTTTGCAGGCAACATGATTTCAGCG TTGCTAAATTTGATGAGCGAACAGTAATAATTTGTGACCAGTGTGAGAAGGAGTATCATGTTGGTTGCTTGCGGGACATAGGACTATGTGAATTGGAAGA GCTGCCTAAGGATAAATGGTTTTGTTGTGAAGACTGCAATCGAATATATGTGGCTCTTCAGAATTCAGTTTCTGCTGGAGCAGACATTATACCAACTTCC TTGTCAGAACTAATAATCAAGAAGCATGAGGAGAGGGGATTATGTACCTATGAAGGCATGAATGGCATCCAGTGGAGAATTTTAAGTGGGAAGAGTCGTT ATCCAGAGCATTTACCTTTACTTTCACGTGCTGCTGCAATTTTTCGAGAGTGTTTTGATCCCATTGTTGCACTATCTGGTCGTGACTTGATTCCTGTTAT GGTCTATGGGAGAAATATTTCTGGCCAAGAATTTGGGGGGATGTATTGCATTGTTTTAATTGTGAATTCTGTTGTTGTATCTGCTGGTCTGCTTAGGATT TTTGGCTGTAATGTTGCTGAGCTTCCACTGGTAGCTACAAGTAGAGAATATCAAGGAAAAGGTTATTTTCAAGCGCTATTCTCTTGCATAGAGAGGTTGC TGTCTTCTCTCAATGTAGAAAAGCTGGTACTTCCTGCAGCAGGGGACGCTGAGTCAATTTGGACTAAGAAATTAGGCTTTCGAAAGATGAGTGAAGATCA GGTATTCCTGCTTTTTACTGGTTTAGGGGAATTAGATATTATGGAGCCTTTTTACTGAAAACCAAATGAATCAATTGATCAGATCAAAATACAGATAAAA TAACATCAAATTTTCTTGCATTTGTAAGACTATAATTGACATAATAAATCGGCTTCATTATGATTCTTAGTCTTTCTTGGACCTGTATAGTTTGCTGGTT TTAGATATTCTCTTAGGGTACCCAATATTTGATTCCACATTGAAAGGCTTAAATGCATTAGCTTGTAATAATGTCTAATTGTGCAGGTACAGTGAAGGAA TAACATCCTTTTCATAACTTAAACATGACCTATTTATTCCATTCTACCTTTTGACTTGGTACTGACATATGATAGTAAGATCATGGTTATGGTGACCTGA GTTCCTAATTGGTGTATATAATTCATATTTAAGTTACATCTTTTAATCTCATTCTATTTGCTCTCTAAGATTATGATCATGCATTGACAATTGATTTTTC CCCCTAGTTATCCAAATATCTCAGGGAGGTGCAGCTCACCCTCTTCAATAAAACTTCCATGCTTGAGAAGACAGTGCAGCCGGCAATAGAGTGATGCTTT ATCTGTTGTAACTATTTTTTGGTTCTCTATTAATTTTCAAGTATTTCCCTCAATGTAACATTGCTGCTATTCTCTGCTTTTTATTTCTTCCTTTTCGTAT TGGTTATTTTAGAATATGTTGGTTATGGCTGGGTCTTATGGCAGCAACCAGCCAGAGCTCTTTTTTGTACAATGTAGGATAGATAGAAGCGTATGCGTCG AAATGGGGGCTAGTGGCCTTTAAAAGATAGAGATGAAAGCGAGAACGTGCTGACCAATTTTTTTGTTACCATGCACGTCTGTTATAAAGCTTGAATTCCG TATTTTGATTTTGATACCCTGGACAGAATCCTCTGTTTAATGATGAATTCAACTTTATGATTCTTGGCTTTTTATAAGAGCTTATATACCATG BLAST |
Tissue | flowers |
Gene name | LI_gene_60712; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_155881
Blastp | Increased DNA methylation 1 from Arabidopsis with 29.6% of identity |
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Blastx | Increased DNA methylation 1 from Arabidopsis with 29.11% of identity |
Eggnog | PHD(ENOG410Y0W7) |
Kegg | Link to kegg annotations (AT3G14980) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461091.1) |
Pfam | TPL-binding domain in jasmonate signalling (PF16135.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |