| Id Trinity | FTRINITY_DN56547_c3_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_156268 |
| Sequence | ATCGAATTATATAGCAACAGAACATTGTTTGTTGCTTTAACAATAAACAAATAGTAATGTTATATCCTCCTACTAAATCCTCATACTATAAGAGAGAGTA GGAAAGAAATGAGAATGAATAAAGCTAAAAGATGATTACTCGTAGAGATTAGATTGAAGTTGAAGTAGAGAAGAAAGGGATTTGAAGCAATGACTATGAA GATTGCTCCTCGCAGATGATAACATTGATTAGTTGATCTTTGTTTTGTTTGAATCAGAGTTTGCAGCTATAGAAGAAGAAAGGCTTTAGGTTTTTGTCTT CAAGAGTGAATTGAGACAACATTGCCAAGTTTTAAGCTTTTCACTGTGACACACAATTTTTGAGCACTTTTGACTAGATTAAGTGAAGATTATAGAATGG GTAGACATGGAGTGTTGAAAAAAGTGGTAGGTGACCTTTCATTTCTTGATTCATCACCTTTTGCCAAGCTCTTAGACTCTTGTGTTCGGTCAAGGTCTGT TCTTGAAGCGCGTAACGTTCATGCTCGAATCATTAAGACCCAGTTTAACTCTGAAATCTTCATTCAGAACAGGCTCATTGATGCTTATGGAAAATGTGGT TGTTTGGGTGATGCACGCAAAGTGTTTGATCATATGCCCCATAAGAACACTTTTAGTTATAATGCGATTTTAAGCTCGTTGGCGAAGGCTGGTGCTGTGG ACGAGGCTTTGAATGTGTTTAATTCGATGCCGGAACGTGATCAGTGCTCATGGAATGCTATGGTTTCCGGTTTTGAACAACATGATCATTTTGAAGAAGC TTTGAGATTTTTCGCTGATATGCACCGTGAGGATTTTGTACTTAATGAATACTCTTTTGGAAGTGCTCTTAGTGCTTGCTCAGGTTTGAATGATTTGAAT ATGGGTGTTCAAATTCATGGTTTGATTTTGAAGTCGCGCTATTCGTTAGATGTTTACATGGGTTCTGCTCTTGTTGACATGTACTCTAAGTGTGGTTTGG TGGGATATGCTCAAAGATCTTTTGATGACATGTTTGTGAGGAATATAGTTTCTTGGAACAGTTTGATTACGTGCTACGAGCAAAATGGTCCCGCTGAGAA AGCTCTAGAGGTGTTTGTAAGGATGATGAATAGTGGGATTGAACCTGATGAGGTTACTTTAGCCAGTGTGGTCAGTGCTTGTGCAAGCTTGTCGGCAATT AGGGAAGGATTGCAAATTCATGCTCGTGTTATGAAATCTGATAAATTCCGGTATGACCTTGTGTTAGGCAATGCATTGGTTGATATGTATGCAAAATGCA GTAGAGTAAACGAAGCTAGGTTGGTTTTTGATAGTATGCCGCATAGGGATGTGGTATCTGAAACCTCCATGGTTAGTGGATATGCAAGGGCAGCTAGTGT GAAAGATGCGAGAGTAATGTTTACAAACATGACAGAGAGGAATGTGGTGTCTTGGAATGCACTCATTGCAGGTTATACTCAAAATGGAGAGAATGAAGAG GCTGTTAGTCTTTTCCTCCTCCTGAAGAGGGAATCCATTTGGCCAACCCATTATACCTTTGGGAATCTACTTAATGCATGCGCAAATCTTGCTGATCTGA AGCTTGGTAGACAGGCCCATACTCACATTTTGAAGCATGGGTTGAGGTTTCAGTCTGGAGAAGAATCTGATATTTTTGTGGGGAATTCCCTCATTGACAT GTACATGAAATGTGGACTGGTCGAAGATGGATGCCTTGTTTTTGAAAAGATGGTAGGGAGGGATAATGTCTCATGGAATGCCATGATAGTGGGATATGCA CAAAATGGTTATGGTACAGAGGCCCTTGAAATTTTCAGGAAAATGATGCTATCTGGAGAAAAACCAGATCATGTTACTATGATAGGAGTTCTATCTGCAT GTAGCCATGCAGGACTTGTTGAAGAAGGACGCCATCACTTCCAATCAATGTCCGAACATAATTTAGCACCATTGAAGGACCATTTTTCATGCATGGTTGA TTTACTCGGTCGGGCGGGTTGCCTTGATGAAGCAAAAAAATTGATAGAGACAATGCCAATGCAACCTGATGCTGTTGTTTGGGGATCTTTACTTGCTGCT TGTAAAGTTCATAGAAACATTACATTAGGGAAGTATGTTGCAGAAAAGCTCTTGGAGATTGATCCGTTCAACTCTGGACCTTATGTTCTTCTTTCAAATA TGTATGCTGATCTTGGTAGATGGAAAGATGTGACGAGAGTCAGGAAATTGATGAAGCATCGAGGAGTAATTAAGCAACCCGGTTGCAGTTGGATTGAAAT AGAAAGTCGTGTGCATGTTTTCATGGTGAAAGATAAAAGGCACCCTCGTAAGAGGGATATCTATTCATTTTTGAAAATTCTCACACAACAGATGAAGCGA TCTGGCTATGTTCCACAAGTTGAAGATGATGAGATTTATGAGGAGGAAAGTGACTCTGAACAAATTTTACATTATGAAATGGAAATGGCTGTAGACGCTG CAGTTGGATAAAATACTTCAACCTTTTTGCTAAGCATTATTTTTAGTGGTGAGATTTGTTGAAATTTGAAACTCTTGTTTCTAGATACTATGTTTGTTGG TACAACGTTGATTGGTTTTACTTGGCTCACATTAATCTGTGTAGTTGTAGTGAATTCGCTAACTTACTAGGTACACCTGAATGAAGGTCTTGTGAAAGTG ATGAACCCTGTGTTCGTATCTGTATTGTGCTCCGGATGACTATGGTTATTAGGTTGTGTTGGTTGGGAGTTAGAACTGTGGGTCTGTTTAGTTGAGTAGG AAGGAAGTGAGAAGGTAAGAAATAAAATATACTCATTTTCACTTTGGGCTGTATACCTTTTCTAGTGTGTTTGAAAATAAATTTCCGATCTCACTTTCCA TGTGGCAGAGCTAGGAGTTTTTTGTACAGGAGGCACAAAGAACAATACTGTTTAAGGGGACCAAGATAAAAAAAAGTGGCATGTTAAAAACTTTACATCT GAGGTAGCCATAGCCACTGTATGGCAACACAACCCTCTGCCCCTGCAATTTTCCACTAAGCCAACCAGACCCCTTGTCTTGATAATTGATCACTTATCAA TCTGCATGACACATTACACATTGCATAGTGTTAGTCTTTGATAGTATAAATCTGCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_61085; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_156268
| Blastp | Pentatricopeptide repeat-containing protein At2g13600 from Arabidopsis with 69.48% of identity |
|---|---|
| Blastx | Pentatricopeptide repeat-containing protein At2g13600 from Arabidopsis with 70.39% of identity |
| Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
| Kegg | Link to kegg annotations (AT2G13600) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414287.1) |
| Pfam | PPR repeat (PF01535.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |