Ll_transcript_156491

Id TrinityFTRINITY_DN56555_c0_g1_i20
Name TranscriptLl_transcript_156491
SequenceCTAAACCCACTGTGGGAGCAATAACGAACCCTTCTCAACAACAGCAATGATGGATATTGAAGAACAAGATCAACACCATTCCCTAACCGAACCTCCCAAA ATCAACCGCCTCAGCGACTCCGTCGTCAACCGAATCGCCGCCGGCGAGGTCATCCAGCGCCCGGTCTCCGCCGTCAAGGAGCTAATCGAGAACAGCCTCG ACGCCGCCTCCACCTCCATCAACCTCCTCCTCAAGGACGGCGGCCTCAAACTCATTCAAATCTCCGACGACGGCCACGGAATACGATATGAGGACCTTCC TATACTCTGCGAGAGGCATACGACATCGAAATTGTCGTCGTTCGAGGATTTAATGAGCATCAAGTCGATGGGGTTTAGAGGAGAAGCTCTCGCTAGCATG ACGTATGTGAGTCATGTTACTGTCACTACCATTACCAAAGGCCAGTTGCATGGTTACAGGGTATCCTATAGAGATGGTGCCATGGAGCATGAACCGAGGG CTTGTGCTGCTGTAAAAGGAACACAAATAATGGTTGAGAATTTATTCTATAACATGACTGCAAGGAAGAAGACACTGCAAAATTCTGCTGATGATTATTC GAAAATTGTAGACTTAGTAAGCAGATTTGCTATTCATCACAATAATGTTAGTTTCTCTTGCAGAAAGCATGGAGCTACCAGAGCAGATGTTCATACAGTT GTCACATCTTCAAGGCTTGACGCCATCAGATCTGTTTATGGGGTCTCGGTTGCTCGTAATCTGATCAAACTTGAAGCTTCAGACAATGGTCCATCTTCTT CAGTTTTCGAGATGCATGGTTTCATGTCAAATGCCAATTATGCTGCCAAGAAAATCACTATGGTGCTTTTCATTAATGATAGATTGGTTGAGTGGTCTGC ATTGAAGAGAGCTATTGAGATTGTTTATGCAACAACATTGCCCAAAGCATCTAAACCCTTTGTATATATTTCAATTGTTTTGCCACCTGAGAATATTGAT GTCAATGTGCATCCGACAAAGAGAGAGGTGAGTGTTTTAAATCAGGAAGCTATCATTGAACAGATACAGTCAGTGATTGAATTGAGATTGAGGAGTTCTG ATGAGGCAAGGACATTTCAAGAACAGACAGGGAGGCAATCTTCATCGTCTCAAATTAATACAAGCAAGGAGGTGATCCTTAGCCCTAAGACACCAGGATC TCGATCACAGAAAGTGCCAGTACATAAGTTGGTTAGAACAGATTCATTAGATCCTGCTGGAAGATTACATGCTTACGTACAAATGAAGCTTGATGGACAT ATTGAAAAGTGTTCTAGTTTGAACGCAGTAAGGTCCTCAGTTAGACAAAGAAGGAACCCAAAAGGTTCCTTAGATCTGACTAGTGTTCAAGAGCTTCTTG ATGAGATCAATAACAAATGTGACCCAGGCATGATGGACATTGTAAGGCACTGCACGTACATTGGAATGGCAGATGATGTTTTTGCTGTCATTCAACACAA TACCCATCTTTATCTTGCGAATGTTGTAAACCTGAGCAAAGAGCTTATATATCAGCAAGTTCTGAGCCGTTTTGCCCGTCTCAATGCCATAAGTATAAGT GATCCCCTCCCCTTGAAAGACTTGATTATATTAGCGTTGAAGGAGGAAGATTTAGATTCAGAATGTAATGATGTGGATCACCTCCAAGAGAAGATTGCTG AAATGAACTCAGAACTGCTGAAACAAAAGACTGAAATTATGGATGAGTTTTTTAGCATTTACATTGACAAACATGGAAATGTTGCTACCCTTCCTGTGAT ACTCGACCAGTATACTCCTGACATGGATCGCATCCCTGAGTTTGTGCTTTGTTTAGGCAATGATGTTGATTGGGAAGATGAAAAGAATTGCATTCAAGGA GTTTCAGTTGCTCTGGGGAATTTCTATGCTATGCATCCACCAATGTTGCCAAATCCATCTGGTGAGGGCTTGCTTTTCTACAAGAAGAGAAAAGTGCTAG ACAATTGTACCAAGGAAAATGCATGTGATAGTACTGGGAGCAATGTAGAGAATGATAAAGTTGATCACGAACTGCTTTCTGAAGCCACAACTGAATGGGC TCAGCGCGAGTGGACAATACAACATGTGCTTTTTCCTTCCATGAGACTCTTTTTCAAACCACCTGTTTCTATGGCTACTAATGGAACCTTTGTTAAGGTA ACTTCATTGGAGAGACTGTATAAGACATTTGAAAGATGTTAGGCAACCACATAGATTTTGAGACTGTATAACTCATGCTACTTAAATGTATATACCAGGT AGTGGTTACTTTTCCCAAAATTATCTTCACGCATTTCAAGTTTTCTTATTCAACTCTGAATTCTGTACTCTGTACTCTTGTCCTTTTATATATTTCAAAA CTGGTATTGTACAAATCTTACTAGTCCAATACAATATTAATTCAAAATAAA BLAST
Tissueflowers
Gene nameLI_gene_61159; 
Additional informationdetails; 

Expression of Ll_transcript_156491

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_156491

BlastpDNA mismatch repair protein MLH1 from Arabidopsis with 70.29% of identity
BlastxDNA mismatch repair protein MLH1 from Arabidopsis with 69.29% of identity
EggnogThis protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (By similarity)(COG0323)
KeggLink to kegg annotations (AT4G09140)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019441032.1)
PfamHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF13589.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;