Ll_transcript_85091

• Id Trinity: FTRINITY_DN56676_c2_g1_i1
• Name Transcript: Ll_transcript_85091
• Sequence: GAGTCAATCGAAATTGCAGAAAAATGGCAACTTCGAATGGATTCGCTATGAACCTTCCGGTGTTAGATAGAAAGAACTATGATCACTGGTCTGTCCAGAT GAGAGCAATCTTTGGCTTTCAGGAGTGACGTGATGTTGTGTTGCAAGGATATCAGCAACTTGGGGAAAATCCATCAGAATCTCAGAAGATGGAATTCAGA GGAGCTGAGAAGAGGGATTGTAAAGAAATCTTCTTGATTCACCAATGTGTGGATCACTCAAACTTTGACAAGATTTCAGCAGCTCAAACTTCTAAAGAGG CCTGGGAAGGCAATTCGAACTATTGCAGATGGATGAAGAAGAGAAAGTTGCAGATTACTTTGCAAGAATCAGAAGCTTAATCAATCTGATGAGGAGTTAT GGTGATCAGATGAGTGAATTGAGCAAGGTGGACAAGATTCTAAGGACCCTTTCAACCAAATTTGACAATATGGTCATTGCCATAGAGGAGTCCAAAGATC TTGAGACCATAAGATTGGATGAATTGCAAGGATCATTGGAGGCTCATGAGCAGAGGTTGAAGGAGAGGCATAATGGCAGACTCACTCAGCAGGCTCTGAG TGCACAATTCAAGAAGAAGTGCATGAGCTTCAATGATGCAAGGAAGAAGGATTCTGAAAAAAATGCCAATAGATAAGAAGGATGGAACTGAATCCTCAAC TTCAAGGCAATTTGATGTGAAAGGAAGCAAGAAATGGAATGGTGCCAAGAAGAAAAAGGATAAAAGCAAGATTCAGTGCTATGCCTGCAAGAACTATGGA CACTATGCCTCTGAGTGCAATTCCAAGAAAGTTCTTAAGGATGAGGAAGCAAGGCTTGCCAAGGATGAGAACTCAGAAGAAGAGGTGTTGCTGCTAGCAC AAAGTGACAACACTGAATCAAACTTGGTTGCTGTGGCTGAAACTCAGAAGGCTATCACCAAGGATGATGCAGACAGTTGGTATTTGGACACAGGATGTTC AAACCATATGACAGGCCATAGAGAATGGTTCACTGAGCTTGATGAGTCAGTGAAGCCTAGAGTTAAATTTGCAGATGATAGCTACATTGTAGCAGAAGGA ATGGGCAGAATTATGATCAAGAGGAAGGATGGGGAAGAGGCATGCATTTGAAATGTATTGTTTGTACCTAAAATGAGGAACAATTTGATCAGTCTTGGTC AATTGTTGGAGAAAGGGTACAATATTTGCATGAGAGATAGAATGCTCAAGGTCTATAGCAATGATCGAAATCTAATCTTGAAGGCTCCATTGTCTCAAAA CAGAACCTTCAAGATTGGAATTCATCTTGCTGACCATAATTGCCTGAAGTCAATTGCAGATGAGACTTGGCTATGGCATCAAAGACTTGGACATCTGAAT TGGAGGAGTATGAATCAGATGAGCAAGGACAAGATGGTTCTTGGAATACCAACTTTCAGAACAGAAGTTGAAACCTGTAGGGAGTGTCTCATTGGCAAGC AAACAAGGAAGAATTTCAAGTCATTCATTCCAACTAGATCTACCAAGCCACTGGAACTAGTTTATACAGATGTATGTGGCCCTATGGAGGTACAATCAAT TGGAGGTAACAACTACTTTGTTACCTTCAAGGATGATTTTACAAGGAAGATGTGGATCTATCTGATTCAAAGAAAGAATGAAGTGCTTGACAGATTCAAG AATTTCAAGTTGGTTGCAGAAAATCAGTGTGGACTGAGAATGAAATGCTTGAGGAGTGATGGAGGAGGAGAATATGTGTCTCATGAATTCAACCAATTCT GTGAGAAAGAAGGGATGATTCATGAAGTGATTGCTCCATACACACCTCAGCATAATGGAACAACAGAGAGGGTAAACAGGTCAGTGCTCAATATGACAAG AAGTCTGCTGAAAACCAAAGGTCTACCAAAGTTGTTTTGGGGAGAAGCTGTGTCAACTGCAACCTATTTGATCAATAGAAGTCCAACAAAGAGACTGAAA GGCATGACACCTGAAGAAAAATGGTCAGGGATCAAGCCAAGTGTGGCACATTTCAAGATTTTTGGCTCTATATGCTACAAGCACATACCTGATGCAAGGA GGAAAAAGCTTGATGATAGGAGTGAAAAATTGATCTTCCTTGGCTATCACTCAACTGGATCATACAAGGTATTCAATCCTATTGATAATAATTTTTCATT CAGTAGGGATGTGGTATTTGATGAGACAGATGCATGGGACTGGAACACAAAACCAGTAGTGTCAAGCAAGCCTGGCCTGATGCACATAGAAGGCACAAGT GCAACACCAAATCTAACAAGTCCTGAGACAGAAGGTGCTGAGACAGTGATAGATAATGCAGGCCAAGCAACAAATGACTCAGGTGCAAGACCTCAAAGAC AAAGGCAACTACCACCTAGACTGAGGGACTATGAGTTGTTTCCAGATGCTTCAATCACCTCAGAAGGGGATCTGGTTCACATGGCACTAATGGCAGATAT GGAACCTATCACTTTTGAAGAAGCAGCACAACAAAAGTATTGGATTGAAGCAATGCAAGAAGAGATAAAGGCAATAGAAAGAAACAACACTTGGGAATTA ACAACTCTACCCAAAGGAAAGAAGGCAATATCAGTAAAGTGGGTATATAAGGTCAAATTGCAGCCAGATGGATCAATTGCTAAGCATAAGGCCAGACTGG TTGCAAAGGGCTTTCTGCAAAAACCAGGCCTAGACTTTGAGGAAGTGTTTGCACCAGTTGCAAGGATTGAAACAGTGAGATTGATCATAGCCATAGCAAG CATTGAAAACTGGAATTTGAGTTAGATGGATGTGAAATCAGCCTTCCTTAATGGACCACTTGACAAGGAGGTGTTTGTGAGTCAACCAGCTGGCTTTGAA GTTTCAGGACAAGAACACGAAGTATACAAACTGCACAAGGCTTTGTATGGATTGAGACAAGCTCCTAGAGCTTGGAACAAGAGAATTGACACATTTCTTG TTCAGCTAGGACTTGTGAGGTGCATAAATGAGCATGGTATCTATGTGAAGAGTGCACCAGAAGTAGCCTCAGTGATCATATGCCTATATGTTGATGATCT TCTGATAACAGGCTGCAAAGTGGATGAGATTGAATGCATCAAGGACAGCCTGAAAGCTGAATTTGAAATGACTGACCTAGGAACACTATCTTACTTCTTG GGCATGGAATTCACCAGAAACAGCAAGGGAATTTTAATGCACCAGAAGAAGTATACCTCTGATGTACTTAAGAGGTTCAACATGATTGACTCCAATGCTT CTTCCACACCAGTAGAGACTGGAACACACTTGTGTTATGCAAGCAGAGATGGAGAATTCAAAGAGGGTGAAGAGGTGGATCCTAGGCTATACAAACAGAT GATTGGTTCTTTGAGATACATCTGCAACTCAAGACCAGACATCACCTATGGAGTTGGCTTGGTTACCAGGTATATGGAGAAACCTAAGACCTCTCACTTG AAAGCAGTAAAGAGGGTGCTTAGATACCTCAAAGGAACCATGGAATTTGGAGTGTACTTCCCTGCAACAGTTGAGGACAGTGGCAAGACAGTTCATGGCT ACACTGATGCAGATTGGTGTGGAGATAAGGATGATCGAAAAAGCAC
• Tissue: flowers
• Gene name: LI_gene_62163;
• Additional information: details;

Expression of Ll_transcript_85091

FPKM

• FPAB: 0.2
• FPNAB: 0.5
• LF1: 0.6
• LF2: 0.2
• LF3: 0.3
• LF4: 0
• UF1: 0.2
• UF2: 0.3
• UF3: 0.2
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_85091

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 35.94% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 34.87% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019465092.1)
• Pfam: GAG-pre-integrase domain (PF13976.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;