Id Trinity | FTRINITY_DN56690_c0_g1_i6 |
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Name Transcript | Ll_transcript_84110 |
Sequence | AGTTGCTGCAAGCTATTCGAATTCAAGTTCTTGGTCTTGTAGAATGGTTGACTATGATGATGATGAAGATTACAGGCCACCACCAAAGAAGCTGCCTGAA TCTTCTGAGGAAGGGACAATGGAGTCTCCGAGGCAGAAAAGGAAATTACCTTCAAAGGATAAGGGGCCCGAACTTGTGAAGAAGCAGAAGTTATCCACGA ATTCAAGATTTAAAGATAGTGTTTTTTCTGCTTTGTGTTCATCATCGAGCCAAGCTATGCTACCTGACAAGAAAACCGCTACAAACATTCATACAGGTGT TCAAACAGTTGAAGGGAAAATGAGCTCAAATGAAGATAATCAAGATGAAAGGTCAAATGTTTCTAGAAGTTGCTCTCATAACAATAGCAGCAAAGTAGCT GAAGATAACCATGTAGAGAAAGAAACTGCAGCCTCTAGAAGCTGTTCTGATTGCCTGCGTGGCACATCAGATAACATACCGATGGGTGGAGAAGATCATC CATTGGTTCCTTCAAATTCCTCGCCAGAGATGGCAGTAAATGGATCATAAGCTTTTAGAATCATTTGCTTGACTGTAAAATAGTAAGACAGGGGAATATT AAGTAGTGGGGGAAATTCTGATTATGTGTTCCGTCTAGGACATGTTGAGATACTGTACAGTGCCATTAAGTGGCTCGGAAGATAATTAATACAGCCAGTG GGTGGATCGGCTCCTATTCTCCATGCTTTCTATTTCGGGCATTTAGCTTAGTAATTGTTGCTTTTGTATAACATTCTCAGACTTTTTCTTAACTCAATTT TTGCTAGAAGAATCATGGTGTGGGTTGTGGTGATCATGTTATCACCAACCCATTTTCAGTTATTTGAACTTGGTGATAGAGGGCGCCAATGTTTGCCCTT CACAAGTTTTCCCTTTTGGTTTTCTTTTGTTTTTTGGGCGGTGGGTCTGTTAGCAGGGATATATATGTTCAGTAATTTCTTGGTCCAAAATTTCAACAAT ATGCTTGGGAACCATCATCCGTTGTAAATATGTTATGCAACGGACTTTTCATGCAGCTCTTTCACATTGCAACTGGATTCACATTTGTTTTCCACAGATC ATGATTTATCGTGTATTTTGATTTCAACTGAATTGAAGTTTTAATTGCCCGACCTTTATACGAAAGCCTTATTTCTCTTTTCATCCTATGACTGTGGTTG AAGTAGGCCTGTTTACTGCCGTGTTAACCTTGGGTTTGTTTGGTTTGGCACAGTTGTTATAAAGTTTATACACATTTTTGGAGTCTAACGGGTATATATA GAAGTCTTTTCTTTCACTTCTTTTTCCTTTTAAAATCTAACTCTCAAATAAACTATAAGCAATTTGTTATTTGTATTATGCTATCCAATTTTGAAGGATA TAAGGTCTAGGGACATAACGAATAGGAAAATGTCTCAAAAAAGTAGTTTGTGAATATTACACTGGGCTTGATTTGGAGAGGTGTCGCTGAAACAGTTAAT ACGAGTGAGGTGGTGCGCATCATCGGATTTTGAGACACGTGTGCAGTGTGTTGCAAATGTGTCGCCACCAACTGCGCATTCTTGTAATTTAGGAAGATCC ACATGTGACTCATTCAAACACGTGTTATCCTATCCACTATTCTTCCCCATGTCATGTTTTCTTGTCTCTGTCTGTTATCATTTACTAACTCATCACTTTC CTTTCCCTCTTGTCTCTGTTTGTTTGTTTTAGTGTATAGTTAGTGGAAATCAATTAAGGAATTAAGATGAACAGCGGAAGCAGCAACTTGGAGACACGGT CTGTGTTGGATGAGCTAAGTAGCTTTAACAAAGGAGGACTCTTCGATCTTGGACACCCTCTTCTCAATCGTATTCTTGACAGTTTCGTCAAAGCTGCAGG GATAGGTGCTGTTCAAGCTGTGTCCCGTGAGGCCTATTTCTTCACTGCTGTTGAAGGTTCAGGAGGGCTAGATAATGCAGGTGGTATGCCTCTAGAAGTT GGTGGCAAGAAACATCGTTTGCCTGGTCTCAGAGGAGAGACCAGCAGCAAATCCATTGAAGCTATGGTGAAAAATACCGGCAAAGAGTCCTTTCAATGGG GATTGGGTGCAGGAATATATTCAGGTCTCACCTATGGGCTGAAGGAAGCTCGTGGAGTTCATGACTGGAAAAACAGTGCAGTTGCTGGAGCACTTACTGG GGCAGCACTTGCAGTTACATCAGACAACTCATCTCATGAACAGATTGTGCAATGTGCTATCACTGGAGCAGCAATCTCCACTGCTGCAAATCTTCTCACT GGGATATTCTAAACCCTGTTAAGATTTGCTTTTGAGGTTGATAATTTTTGTGATATGAATACTGGTACATGTTCAAGTTGAATTTTCCAGTATTTCAATT TCATGTTTTTTAGCATTTAGCAATATGTGGTGGTTTCATATATCTTCAACTCCAAGTTCTTTATCTCCGGTAGTTGTGCACTGTGAAATTTGCACTAAAA TTTTCAATTTTAATTGTTTATGTTGTGATAAATATTTGGCAAGCGTGAAACATTGCACCTTTGATTATTTTC BLAST |
Tissue | flowers |
Gene name | LI_gene_62301; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_84110
Blastp | Outer envelope pore protein 16-2, chloroplastic from Arabidopsis with 70.11% of identity |
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Blastx | Outer envelope pore protein 16-2, chloroplastic from Arabidopsis with 66.09% of identity |
Eggnog | Mitochondrial import inner membrane translocase subunit Tim17 Tim22 Tim23 family protein(ENOG410YI0M) |
Kegg | Link to kegg annotations (AT4G16160) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019462799.1) |
Pfam | Tim17/Tim22/Tim23/Pmp24 family (PF02466.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |